BP919924
Clone id YMU001_000130_G03
Library
Length 498
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000130_G03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GGGGAGACTTATGGGAGAAATAGGCTATCAAATAAATCTACTGTTCCCATGTCTGCTATT
ACTTATAGTTTGAGCTTGTTGGTCTAGCAAGCATGTTTTTTGGAGCTAGCAGTGCAACTC
ATGAAAAGCTCATTTGGTTTTTGTAGCTTCCTATCCTAATTGCTTCCTCCTAGTTTAGAG
ATAGCTACATTTCTTAGGGTATTGCCGGTTGGCATGATCATTCACAAAGGACTCATCTAT
GGCCACCTTAAGCTTATCGAAGCTTTTCTGTTGGGTTTTCTCTTAACTTATACTCTTACT
TTTTAGTTTCAATTGGTCTATCAATAGGATTGTGATCTTCGCGTAGTCTTTCACATATTG
TCGGTGGAACCTCGACATACCAAGAAAATTCTACAATTCCTCAAGATTTCTTGGTGTTGA
CTTCCTAAGAATAGTTTCCACTTTCTCAAGTTTCATCCGTATCCCCTCTGTGGATATAAT
GTGACAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q8I7P9
Definition sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster
Align length 50
Score (bit) 45.4
E-value 0.0001
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919924|Adiantum capillus-veneris mRNA, clone:
YMU001_000130_G03.
(485 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from tra... 45 1e-04
sp|P92523|M860_ARATH Uncharacterized mitochondrial protein AtMg0... 45 1e-04
sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from tra... 42 0.001
sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from tra... 39 0.016
sp|P10401|POLY_DROME Retrovirus-related Pol polyprotein from tra... 35 0.14
sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa prot... 31 3.4
sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa prot... 31 3.4
sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa prot... 31 3.4
sp|P10272|POL_BAEVM Pol polyprotein OS=Baboon endogenous virus (... 30 4.4
sp|P31792|POL_FENV1 Pol polyprotein (Fragment) OS=Feline endogen... 30 5.7
sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Sa... 30 7.5
sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Sa... 29 9.8

>sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from
transposon opus OS=Drosophila melanogaster GN=pol PE=4
SV=1
Length = 1003

Score = 45.4 bits (106), Expect = 1e-04
Identities = 18/50 (36%), Positives = 35/50 (70%)
Frame = -3

Query: 483 HIISTEGIRMKLEKVETILRKSTPRNLEEL*NFLGMSRFHRQYVKDYAKI 334
+I++ +GI+ +KV I P +++EL FLGM+ ++R++++DYAK+
Sbjct: 329 YIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKV 378


>sp|P92523|M860_ARATH Uncharacterized mitochondrial protein
AtMg00860 OS=Arabidopsis thaliana GN=AtMg00860 PE=4 SV=1
Length = 158

Score = 45.4 bits (106), Expect = 1e-04
Identities = 21/50 (42%), Positives = 33/50 (66%)
Frame = -3

Query: 483 HIISTEGIRMKLEKVETILRKSTPRNLEEL*NFLGMSRFHRQYVKDYAKI 334
HIIS EG+ K+E ++ P+N EL FLG++ ++R++VK+Y KI
Sbjct: 37 HIISGEGVSADPAKLEAMVGWPEPKNTTELRGFLGLTGYYRRFVKNYGKI 86


>sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from
transposon 17.6 OS=Drosophila melanogaster GN=pol PE=4
SV=1
Length = 1058

Score = 42.0 bits (97), Expect = 0.001
Identities = 21/84 (25%), Positives = 40/84 (47%)
Frame = -3

Query: 483 HIISTEGIRMKLEKVETILRKSTPRNLEEL*NFLGMSRFHRQYVKDYAKITXXXXXXXXX 304
H+++ +GI+ EK+E I + P +E+ FLG++ ++R+++ ++A I
Sbjct: 413 HVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFADIAKPMTKCLKK 472

Query: 303 XXXXXX*EKTQQKSFDKLKVAIDE 232
+F KLK I E
Sbjct: 473 NMKIDTTNPEYDSAFKKLKYLISE 496


>sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from
transposon 297 OS=Drosophila melanogaster GN=pol PE=4
SV=1
Length = 1059

Score = 38.5 bits (88), Expect = 0.016
Identities = 21/82 (25%), Positives = 41/82 (50%)
Frame = -3

Query: 483 HIISTEGIRMKLEKVETILRKSTPRNLEEL*NFLGMSRFHRQYVKDYAKITXXXXXXXXX 304
HI++ +GI+ KV+ I+ P +E+ FLG++ ++R+++ +YA I
Sbjct: 412 HIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNYADIAKPMTSCLKK 471

Query: 303 XXXXXX*EKTQQKSFDKLKVAI 238
+ ++F+KLK I
Sbjct: 472 RTKIDTQKLEYIEAFEKLKALI 493


>sp|P10401|POLY_DROME Retrovirus-related Pol polyprotein from
transposon gypsy OS=Drosophila melanogaster GN=pol PE=4
SV=1
Length = 1035

Score = 35.4 bits (80), Expect = 0.14
Identities = 16/49 (32%), Positives = 31/49 (63%)
Frame = -3

Query: 480 IISTEGIRMKLEKVETILRKSTPRNLEEL*NFLGMSRFHRQYVKDYAKI 334
I+S +G + EKV+ I P + ++ +FLG++ ++R ++KD+A I
Sbjct: 389 IVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIKDFAAI 437


>sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa protein
type 3 OS=Schizosaccharomyces pombe GN=Tf2-11 PE=4 SV=1
Length = 1333

Score = 30.8 bits (68), Expect = 3.4
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = -3

Query: 477 ISTEGIRMKLEKVETILRKSTPRNLEEL*NFLGMSRFHRQYVKDYAKIT 331
IS +G E ++ +L+ P+N +EL FLG + R+++ +++T
Sbjct: 615 ISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLT 663


>sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa protein
type 2 OS=Schizosaccharomyces pombe GN=Tf2-7 PE=2 SV=1
Length = 1333

Score = 30.8 bits (68), Expect = 3.4
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = -3

Query: 477 ISTEGIRMKLEKVETILRKSTPRNLEEL*NFLGMSRFHRQYVKDYAKIT 331
IS +G E ++ +L+ P+N +EL FLG + R+++ +++T
Sbjct: 615 ISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLT 663


>sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa protein
type 1 OS=Schizosaccharomyces pombe GN=Tf2-1 PE=2 SV=1
Length = 1333

Score = 30.8 bits (68), Expect = 3.4
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = -3

Query: 477 ISTEGIRMKLEKVETILRKSTPRNLEEL*NFLGMSRFHRQYVKDYAKIT 331
IS +G E ++ +L+ P+N +EL FLG + R+++ +++T
Sbjct: 615 ISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLT 663


>sp|P10272|POL_BAEVM Pol polyprotein OS=Baboon endogenous virus
(strain M7) GN=pol PE=3 SV=1
Length = 1189

Score = 30.4 bits (67), Expect = 4.4
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = -3

Query: 444 KVETILRKSTPRNLEEL*NFLGMSRFHRQYVKDYAKI 334
++ET+ R PRN E+ FLG + F R ++ +A++
Sbjct: 402 RIETVARIPPPRNPREVREFLGTAGFCRLWIPGFAEL 438


>sp|P31792|POL_FENV1 Pol polyprotein (Fragment) OS=Feline endogenous
virus ECE1 GN=pol PE=3 SV=1
Length = 1046

Score = 30.0 bits (66), Expect = 5.7
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = -3

Query: 444 KVETILRKSTPRNLEEL*NFLGMSRFHRQYVKDYAKITXXXXXXXXXXXXXXX*EKTQQK 265
++ET+ P+N E+ FLG + F R ++ +A++ EK Q
Sbjct: 259 RIETVAHIPPPQNPREVREFLGTAGFCRLWIPGFAELAAPLYALTKESAPFTWQEK-HQS 317

Query: 264 SFDKLKVAI 238
+F+ LK A+
Sbjct: 318 AFEALKEAL 326


tr_hit_id A5ADK2
Definition tr|A5ADK2|A5ADK2_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 96
Score (bit) 55.1
E-value 2.0e-06
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919924|Adiantum capillus-veneris mRNA, clone:
YMU001_000130_G03.
(485 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5ADK2|A5ADK2_VITVI Putative uncharacterized protein OS=Vitis... 55 2e-06
tr|Q4EA25|Q4EA25_9RICK Pol protein (Fragment) OS=Wolbachia endos... 55 2e-06
tr|A5B486|A5B486_VITVI Putative uncharacterized protein OS=Vitis... 55 2e-06
tr|A5AHB8|A5AHB8_VITVI Putative uncharacterized protein OS=Vitis... 55 2e-06
tr|A5C6R3|A5C6R3_VITVI Putative uncharacterized protein OS=Vitis... 54 3e-06
tr|A5BJR9|A5BJR9_VITVI Putative uncharacterized protein (Fragmen... 54 3e-06
tr|A5AWV3|A5AWV3_VITVI Putative uncharacterized protein OS=Vitis... 54 3e-06
tr|B8MA62|B8MA62_9EURO Retrotransposon polyprotein, putative OS=... 54 4e-06
tr|Q0J7S9|Q0J7S9_ORYSJ Os08g0164800 protein (Fragment) OS=Oryza ... 54 5e-06
tr|A5C316|A5C316_VITVI Putative uncharacterized protein OS=Vitis... 54 5e-06
tr|A5BTW2|A5BTW2_VITVI Putative uncharacterized protein OS=Vitis... 54 5e-06
tr|A5B5G8|A5B5G8_VITVI Putative uncharacterized protein OS=Vitis... 54 5e-06
tr|B8LVB3|B8LVB3_9EURO Gag/polymerase/env polyprotein, putative ... 54 5e-06
tr|A5C0S0|A5C0S0_VITVI Putative uncharacterized protein OS=Vitis... 53 7e-06
tr|A5BY72|A5BY72_VITVI Putative uncharacterized protein OS=Vitis... 53 7e-06
tr|A5AK31|A5AK31_VITVI Putative uncharacterized protein OS=Vitis... 53 7e-06
tr|Q17318|Q17318_CERCA Pol-like protein (Fragment) OS=Ceratitis ... 53 7e-06
tr|B8MUS4|B8MUS4_9EURO Retrovirus polyprotein, putative OS=Talar... 53 7e-06
tr|A5C9C9|A5C9C9_VITVI Putative uncharacterized protein OS=Vitis... 53 9e-06
tr|A5BI69|A5BI69_VITVI Putative uncharacterized protein OS=Vitis... 53 9e-06
tr|Q2QSH9|Q2QSH9_ORYSJ Retrotransposon protein, putative, unclas... 52 1e-05
tr|A5BVR5|A5BVR5_VITVI Putative uncharacterized protein OS=Vitis... 52 1e-05
tr|A5BVC3|A5BVC3_VITVI Putative uncharacterized protein OS=Vitis... 52 1e-05
tr|A5BH24|A5BH24_VITVI Putative uncharacterized protein OS=Vitis... 52 1e-05
tr|A5B4W9|A5B4W9_VITVI Putative uncharacterized protein OS=Vitis... 52 1e-05
tr|A5AJ22|A5AJ22_VITVI Putative uncharacterized protein OS=Vitis... 52 1e-05
tr|A5C8C3|A5C8C3_VITVI Putative uncharacterized protein OS=Vitis... 52 1e-05
tr|A5BW26|A5BW26_VITVI Putative uncharacterized protein OS=Vitis... 52 1e-05
tr|A5BVQ8|A5BVQ8_VITVI Putative uncharacterized protein OS=Vitis... 52 1e-05
tr|A5BVP5|A5BVP5_VITVI Putative uncharacterized protein OS=Vitis... 52 1e-05

>tr|A5ADK2|A5ADK2_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_039404 PE=4 SV=1
Length = 1834

Score = 55.1 bits (131), Expect = 2e-06
Identities = 33/96 (34%), Positives = 52/96 (54%)
Frame = -3

Query: 483 HIISTEGIRMKLEKVETILRKSTPRNLEEL*NFLGMSRFHRQYVKDYAKITXXXXXXXXX 304
HIIS GI + KVE I++ P N++ + FLG RF+R+++KD++KI+
Sbjct: 1179 HIISKNGIEVDKAKVELIVKLPPPTNVKGIKQFLGHVRFYRRFIKDFSKISKPLCELLVK 1238

Query: 303 XXXXXX*EKTQQKSFDKLKVAIDESFVNDHANRQYP 196
EK QKSF++LK + + + NR+ P
Sbjct: 1239 DAKFVWDEKC-QKSFEELKQFLTIAPIVRAPNRKLP 1273


>tr|Q4EA25|Q4EA25_9RICK Pol protein (Fragment) OS=Wolbachia
endosymbiont of Drosophila ananassae GN=WwAna0683 PE=4
SV=1
Length = 492

Score = 54.7 bits (130), Expect = 2e-06
Identities = 25/85 (29%), Positives = 49/85 (57%)
Frame = -3

Query: 483 HIISTEGIRMKLEKVETILRKSTPRNLEEL*NFLGMSRFHRQYVKDYAKITXXXXXXXXX 304
H+++ EG++ EKV +IL+ PRN++++ FLG++ ++R+++KD++++
Sbjct: 324 HVLTPEGVKPNPEKVNSILQLKIPRNIKQIRAFLGITGYYRKFIKDFSQVAYPLIKCLKK 383

Query: 303 XXXXXX*EKTQQKSFDKLKVAIDES 229
E +FDKLK I E+
Sbjct: 384 DAKIDVNEPNFMIAFDKLKRIITEA 408


>tr|A5B486|A5B486_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_013450 PE=4 SV=1
Length = 1571

Score = 54.7 bits (130), Expect = 2e-06
Identities = 30/79 (37%), Positives = 46/79 (58%)
Frame = -3

Query: 483 HIISTEGIRMKLEKVETILRKSTPRNLEEL*NFLGMSRFHRQYVKDYAKITXXXXXXXXX 304
HIIS GI + KVE I++ P N++ + FLG +RF+R+++KD++KI+
Sbjct: 980 HIISKNGIEVDKAKVEIIVKLPPPTNVKGIRQFLGHARFYRRFIKDFSKISKPLCELLVK 1039

Query: 303 XXXXXX*EKTQQKSFDKLK 247
EK QKSF++LK
Sbjct: 1040 DAKFVWDEKC-QKSFEELK 1057


>tr|A5AHB8|A5AHB8_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_032377 PE=4 SV=1
Length = 584

Score = 54.7 bits (130), Expect = 2e-06
Identities = 30/79 (37%), Positives = 46/79 (58%)
Frame = -3

Query: 483 HIISTEGIRMKLEKVETILRKSTPRNLEEL*NFLGMSRFHRQYVKDYAKITXXXXXXXXX 304
HIIS GI + KVE I++ P N++ + FLG +RF+R+++KD++KI+
Sbjct: 119 HIISKNGIEVDKAKVELIVKLPPPTNVKGIRQFLGHARFYRRFIKDFSKISKPLCELLVK 178

Query: 303 XXXXXX*EKTQQKSFDKLK 247
EK QKSF++LK
Sbjct: 179 DAKFVWDEKC-QKSFEELK 196


>tr|A5C6R3|A5C6R3_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_018601 PE=4 SV=1
Length = 1045

Score = 54.3 bits (129), Expect = 3e-06
Identities = 29/79 (36%), Positives = 46/79 (58%)
Frame = -3

Query: 483 HIISTEGIRMKLEKVETILRKSTPRNLEEL*NFLGMSRFHRQYVKDYAKITXXXXXXXXX 304
H+IS GI + KVE I++ P N++ + FLG +RF+R+++KD++KI+
Sbjct: 375 HVISKNGIEVDKAKVELIVKLPPPTNVKGIRQFLGHARFYRRFIKDFSKISKPLCELLVK 434

Query: 303 XXXXXX*EKTQQKSFDKLK 247
EK QKSF++LK
Sbjct: 435 DAKFVWDEKC-QKSFEELK 452


>tr|A5BJR9|A5BJR9_VITVI Putative uncharacterized protein (Fragment)
OS=Vitis vinifera GN=VITISV_000510 PE=4 SV=1
Length = 1022

Score = 54.3 bits (129), Expect = 3e-06
Identities = 30/79 (37%), Positives = 46/79 (58%)
Frame = -3

Query: 483 HIISTEGIRMKLEKVETILRKSTPRNLEEL*NFLGMSRFHRQYVKDYAKITXXXXXXXXX 304
HIIS GI + EKVE I++ P N++ + FLG + F+R+++KD++KI+
Sbjct: 544 HIISKNGIEVDKEKVELIVKLPPPTNVKGIRQFLGHAGFYRRFIKDFSKISKPLCELLVK 603

Query: 303 XXXXXX*EKTQQKSFDKLK 247
EK QKSF++LK
Sbjct: 604 DAKFVWDEKC-QKSFEELK 621


>tr|A5AWV3|A5AWV3_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_022982 PE=4 SV=1
Length = 1611

Score = 54.3 bits (129), Expect = 3e-06
Identities = 30/96 (31%), Positives = 54/96 (56%)
Frame = -3

Query: 483 HIISTEGIRMKLEKVETILRKSTPRNLEEL*NFLGMSRFHRQYVKDYAKITXXXXXXXXX 304
HIIS +GI + KVE I++ +P N++ + F+G +RF+R+++KD++K++
Sbjct: 941 HIISKKGIEVDKAKVELIVKLPSPTNIKGVRQFIGHARFYRRFIKDFSKLSKPLCELLAK 1000

Query: 303 XXXXXX*EKTQQKSFDKLKVAIDESFVNDHANRQYP 196
E+ Q+SFD+LK + + + N Q P
Sbjct: 1001 DAKFVWDERC-QRSFDQLKQFLTTTPIVRAPNWQLP 1035


>tr|B8MA62|B8MA62_9EURO Retrotransposon polyprotein, putative
OS=Talaromyces stipitatus ATCC 10500 GN=TSTA_121340 PE=4
SV=1
Length = 1697

Score = 53.9 bits (128), Expect = 4e-06
Identities = 29/79 (36%), Positives = 48/79 (60%)
Frame = -3

Query: 483 HIISTEGIRMKLEKVETILRKSTPRNLEEL*NFLGMSRFHRQYVKDYAKITXXXXXXXXX 304
H I+ EGI+++ EKV+ I PRNL+EL +F+G+ ++R+Y+++YAKI
Sbjct: 924 HRITQEGIQIEKEKVQAIKDWPQPRNLKELQSFIGLINYYRRYIENYAKIMTPMFKLLKK 983

Query: 303 XXXXXX*EKTQQKSFDKLK 247
E+ QQK+F++ K
Sbjct: 984 EIPYEWNEE-QQKAFEEAK 1001


>tr|Q0J7S9|Q0J7S9_ORYSJ Os08g0164800 protein (Fragment) OS=Oryza
sativa subsp. japonica GN=Os08g0164800 PE=4 SV=1
Length = 620

Score = 53.5 bits (127), Expect = 5e-06
Identities = 30/85 (35%), Positives = 46/85 (54%)
Frame = -3

Query: 483 HIISTEGIRMKLEKVETILRKSTPRNLEEL*NFLGMSRFHRQYVKDYAKITXXXXXXXXX 304
HIIS+EG+ EKVE I R+ P N+ EL FLGM+ ++R+++K Y I
Sbjct: 336 HIISSEGVATDPEKVEGIRRRKIPNNITELREFLGMAGYYRRFIKGYGVICRPLHDMLRK 395

Query: 303 XXXXXX*EKTQQKSFDKLKVAIDES 229
E+T +F++LK+ + S
Sbjct: 396 DAFQWGPEQT--TAFEELKLRLSTS 418


>tr|A5C316|A5C316_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_005003 PE=4 SV=1
Length = 645

Score = 53.5 bits (127), Expect = 5e-06
Identities = 31/96 (32%), Positives = 52/96 (54%)
Frame = -3

Query: 483 HIISTEGIRMKLEKVETILRKSTPRNLEEL*NFLGMSRFHRQYVKDYAKITXXXXXXXXX 304
HIIS +GI + KVE I++ +P ++ + FLG +RF+R+++KD++K++
Sbjct: 58 HIISEKGIEVDKAKVELIVKLPSPATIKGVRQFLGHARFYRKFIKDFSKLSKPLCELLAK 117

Query: 303 XXXXXX*EKTQQKSFDKLKVAIDESFVNDHANRQYP 196
E+ Q SFDKLK + + + N Q P
Sbjct: 118 DAKFVWDERCQM-SFDKLKQFLTTAPIVRAPNWQLP 152