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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919932
Clone id YMU001_000130_G12
Library
Length 471
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000130_G12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTTTTTTTTTTTTTTTTTTTTTTTTGAGTCCAAAACCATTGCTCGTTGATTTAGATGCCA
TCTCCACTTTTGACACTGTTATTTGAGACATGATCATGTGATAATAGCAGGTTTTATTGT
TGTTTCTCATTAAATCTACAATAACAGGAGTTCTGAGCTGAGCTTTGCCTAATTGTCATT
CGTGTCTCTTGACAATGTGGTTTCCACCCATAGATAGCTTGTACAAATAGAACAACGCCA
TGACCCCACTGATAACCGCCACCATTCCAGCTGGCATTATCTTTCCACTGGCTTGATACC
GCTGTCCCATTACTCAAGTCAGACCTACTGAAATAGCTGTCTCCAGTAGAAATGCGAAGT
AGGAGTTCTCATGTTTCTTAAAGGCCTGCAAGCTGAGATAGCCTGCGAGAAGCAGAAGCG
AGCCGGCAGCACCACCGCCCATCAGAGAAGTGGAGCTGCCCTTCCGGAGGA
■■Homology search results ■■ -
sp_hit_id O64847
Definition sp|O64847|U136_ARATH UPF0136 membrane protein At2g26240 OS=Arabidopsis thaliana
Align length 39
Score (bit) 38.1
E-value 0.016
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919932|Adiantum capillus-veneris mRNA, clone:
YMU001_000130_G12.
         (432 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O64847|U136_ARATH UPF0136 membrane protein At2g26240 OS=Arabi...    38   0.016
sp|Q9W1K0|U136_DROME UPF0136 membrane protein CG5532 OS=Drosophi...    36   0.060
sp|Q9SFB8|PI5K6_ARATH Phosphatidylinositol-4-phosphate 5-kinase ...    34   0.29 
sp|Q54PA8|Y2080_DICDI Uncharacterized protein DDB_G0284671 OS=Di...    33   0.38 
sp|P56984|TM14A_PIG Transmembrane protein 14A OS=Sus scrofa GN=T...    32   1.1  
sp|Q9Y6G1|TM14A_HUMAN Transmembrane protein 14A OS=Homo sapiens ...    32   1.1  
sp|P56982|TM14A_BOVIN Transmembrane protein 14A OS=Bos taurus GN...    32   1.1  
sp|P56983|TM14A_MOUSE Transmembrane protein 14A OS=Mus musculus ...    32   1.5  
sp|Q924P2|TM14C_RAT Transmembrane protein 14C OS=Rattus norvegic...    31   1.9  
sp|Q5R751|TM14C_PONAB Transmembrane protein 14C OS=Pongo abelii ...    31   1.9  
sp|Q9CQN6|TM14C_MOUSE Transmembrane protein 14C OS=Mus musculus ...    31   1.9  
sp|Q9P0S9|TM14C_HUMAN Transmembrane protein 14C OS=Homo sapiens ...    31   1.9  
sp|Q8N8P7|CK044_HUMAN Uncharacterized protein C11orf44 OS=Homo s...    30   4.2  
sp|Q24JP3|F178B_MOUSE Protein FAM178B OS=Mus musculus GN=Fam178b...    30   5.6  
sp|Q9M1K2|PI5K4_ARATH Putative phosphatidylinositol-4-phosphate ...    29   7.1  
sp|Q3UHR0|BAHC1_MOUSE BAH and coiled-coil domain-containing prot...    29   9.3  

>sp|O64847|U136_ARATH UPF0136 membrane protein At2g26240
           OS=Arabidopsis thaliana GN=At2g26240 PE=2 SV=1
          Length = 108

 Score = 38.1 bits (87), Expect = 0.016
 Identities = 19/39 (48%), Positives = 27/39 (69%)
 Frame = -1

Query: 306 SVGLT*VMGQRYQASGKIMPAGMVAVISGVMALFYLYKL 190
           S  LT +MG RY  + K++PAG+V+V+S VM   YL+ L
Sbjct: 66  SAALTGMMGSRYLRTRKVVPAGLVSVVSLVMTGAYLHGL 104


>sp|Q9W1K0|U136_DROME UPF0136 membrane protein CG5532 OS=Drosophila
           melanogaster GN=CG5532 PE=3 SV=1
          Length = 112

 Score = 36.2 bits (82), Expect = 0.060
 Identities = 17/34 (50%), Positives = 24/34 (70%)
 Frame = -1

Query: 324 LLETAISVGLT*VMGQRYQASGKIMPAGMVAVIS 223
           LL+   S+ L  +MG R+  SGK+MPAGMV ++S
Sbjct: 56  LLQLGTSLFLAGLMGARWNRSGKLMPAGMVCMLS 89


>sp|Q9SFB8|PI5K6_ARATH Phosphatidylinositol-4-phosphate 5-kinase 6
           OS=Arabidopsis thaliana GN=PIP5K6 PE=2 SV=1
          Length = 715

 Score = 33.9 bits (76), Expect = 0.29
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -3

Query: 322 TGDSYFSRSDLSNGTAVSSQWKDNASWNGGGYQWGHG 212
           TG+SY +   L +G   + QW+DN     G Y W  G
Sbjct: 16  TGESYHAEKALPSGDFYTGQWRDNLPHGHGKYLWTDG 52


>sp|Q54PA8|Y2080_DICDI Uncharacterized protein DDB_G0284671
           OS=Dictyostelium discoideum GN=DDB_G0284671 PE=4 SV=1
          Length = 305

 Score = 33.5 bits (75), Expect = 0.38
 Identities = 22/83 (26%), Positives = 37/83 (44%)
 Frame = -3

Query: 391 SASRRLSQLAGXXXXXXXXLRISTGDSYFSRSDLSNGTAVSSQWKDNASWNGGGYQWGHG 212
           S ++   Q +G           S+G S  S S  S+G++  S     +S +GGG   G G
Sbjct: 221 SGTQTSGQTSGQTGAQTGQSTASSGSSGSSGSSGSSGSSGGSSGSGGSSGSGGGSGSGSG 280

Query: 211 VVLFVQAIYGWKPHCQETRMTIR 143
           + + V   YG    C +  +++R
Sbjct: 281 MAVKVDKCYGTYCPCNKELLSVR 303


>sp|P56984|TM14A_PIG Transmembrane protein 14A OS=Sus scrofa
           GN=TMEM14A PE=3 SV=1
          Length = 99

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 15/27 (55%), Positives = 21/27 (77%)
 Frame = -1

Query: 288 VMGQRYQASGKIMPAGMVAVISGVMAL 208
           +MG R++ S KIMPAG+VA +S +M L
Sbjct: 66  IMGVRFKRSKKIMPAGLVAGLSLLMIL 92


>sp|Q9Y6G1|TM14A_HUMAN Transmembrane protein 14A OS=Homo sapiens
           GN=TMEM14A PE=2 SV=1
          Length = 99

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 15/27 (55%), Positives = 21/27 (77%)
 Frame = -1

Query: 288 VMGQRYQASGKIMPAGMVAVISGVMAL 208
           +MG R++ S KIMPAG+VA +S +M L
Sbjct: 66  IMGVRFKRSKKIMPAGLVAGLSLMMIL 92


>sp|P56982|TM14A_BOVIN Transmembrane protein 14A OS=Bos taurus
           GN=TMEM14A PE=3 SV=1
          Length = 99

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 15/27 (55%), Positives = 21/27 (77%)
 Frame = -1

Query: 288 VMGQRYQASGKIMPAGMVAVISGVMAL 208
           +MG R++ S KIMPAG+VA +S +M L
Sbjct: 66  IMGVRFKRSKKIMPAGLVAGLSLLMIL 92


>sp|P56983|TM14A_MOUSE Transmembrane protein 14A OS=Mus musculus
           GN=Tmem14a PE=2 SV=2
          Length = 99

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 14/27 (51%), Positives = 21/27 (77%)
 Frame = -1

Query: 288 VMGQRYQASGKIMPAGMVAVISGVMAL 208
           +MG R++ S K+MPAG+VA +S +M L
Sbjct: 66  IMGVRFKRSKKVMPAGLVAGLSLMMIL 92


>sp|Q924P2|TM14C_RAT Transmembrane protein 14C OS=Rattus norvegicus
           GN=Tmem14c PE=3 SV=1
          Length = 115

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = -1

Query: 312 AISVGLT*VMGQRYQASGKIMPAGMVAVISGVM 214
           A S  L  +MG R+  SGK MPAG++A  S +M
Sbjct: 68  ATSGTLAGIMGMRFYNSGKFMPAGLIAGASLLM 100


>sp|Q5R751|TM14C_PONAB Transmembrane protein 14C OS=Pongo abelii
           GN=TMEM14C PE=3 SV=1
          Length = 112

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = -1

Query: 312 AISVGLT*VMGQRYQASGKIMPAGMVAVISGVM 214
           A S  L  +MG R+  SGK MPAG++A  S +M
Sbjct: 67  ATSGTLAGIMGMRFYHSGKFMPAGLIAGASLLM 99
tr_hit_id A9NRF8
Definition tr|A9NRF8|A9NRF8_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 70
Score (bit) 86.7
E-value 5.0e-16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919932|Adiantum capillus-veneris mRNA, clone:
YMU001_000130_G12.
         (432 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NRF8|A9NRF8_PICSI Putative uncharacterized protein OS=Picea...    87   5e-16
tr|A7P0S6|A7P0S6_VITVI Chromosome chr19 scaffold_4, whole genome...    85   2e-15
tr|A9TER4|A9TER4_PHYPA Predicted protein OS=Physcomitrella paten...    80   7e-14
tr|A9PIM6|A9PIM6_POPJC Putative uncharacterized protein OS=Popul...    79   1e-13
tr|Q9AYA9|Q9AYA9_ORYSA Putative uncharacterized protein OSJNBa00...    78   2e-13
tr|Q10I13|Q10I13_ORYSJ Os03g0568500 protein OS=Oryza sativa subs...    78   2e-13
tr|B8AKU3|B8AKU3_ORYSI Putative uncharacterized protein OS=Oryza...    78   2e-13
tr|B6T8F3|B6T8F3_MAIZE Putative uncharacterized protein OS=Zea m...    77   4e-13
tr|B7FH11|B7FH11_MEDTR Putative uncharacterized protein OS=Medic...    76   7e-13
tr|Q9LJU6|Q9LJU6_ARATH Emb|CAB68134.1 (Putative uncharacterized ...    76   1e-12
tr|Q9C6T7|Q9C6T7_ARATH Putative uncharacterized protein F4M15.3 ...    74   5e-12
tr|A3AJN9|A3AJN9_ORYSJ Putative uncharacterized protein OS=Oryza...    66   1e-09
tr|Q6F2W8|Q6F2W8_ORYSJ Os03g0584300 protein OS=Oryza sativa subs...    62   1e-08
tr|B8B6N6|B8B6N6_ORYSI Putative uncharacterized protein OS=Oryza...    62   1e-08
tr|B8AL72|B8AL72_ORYSI Putative uncharacterized protein OS=Oryza...    62   1e-08
tr|A6MZR1|A6MZR1_ORYSI Putative uncharacterized protein (Fragmen...    62   1e-08
tr|B6U3V5|B6U3V5_MAIZE Putative uncharacterized protein OS=Zea m...    57   4e-07
tr|A9SYF6|A9SYF6_PHYPA Predicted protein OS=Physcomitrella paten...    41   0.026
tr|Q7XPM7|Q7XPM7_ORYSJ Os04g0653100 protein OS=Oryza sativa subs...    41   0.034
tr|A3AY48|A3AY48_ORYSJ Putative uncharacterized protein OS=Oryza...    41   0.034
tr|A2XYD6|A2XYD6_ORYSI Putative uncharacterized protein OS=Oryza...    41   0.034
tr|A3AJY4|A3AJY4_ORYSJ Putative uncharacterized protein OS=Oryza...    40   0.058
tr|A8QC23|A8QC23_BRUMA Transmembrane protein 14C, putative OS=Br...    40   0.058
tr|B7FFA9|B7FFA9_MEDTR Putative uncharacterized protein OS=Medic...    39   0.099
tr|A9RP37|A9RP37_PHYPA Predicted protein (Fragment) OS=Physcomit...    39   0.099
tr|A8QC25|A8QC25_BRUMA Transmembrane protein 14C, putative OS=Br...    39   0.099
tr|B8LPI2|B8LPI2_PICSI Putative uncharacterized protein OS=Picea...    39   0.13 
tr|A5BF23|A5BF23_VITVI Putative uncharacterized protein OS=Vitis...    39   0.17 
tr|Q09JH3|Q09JH3_ARGMO Transmembrane protein 14C OS=Argas monola...    39   0.17 
tr|B4FL61|B4FL61_MAIZE Putative uncharacterized protein OS=Zea m...    38   0.29 

>tr|A9NRF8|A9NRF8_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=4 SV=1
          Length = 119

 Score = 86.7 bits (213), Expect = 5e-16
 Identities = 42/70 (60%), Positives = 51/70 (72%)
 Frame = -1

Query: 363 QAFKKHENSYFAFLLETAISVGLT*VMGQRYQASGKIMPAGMVAVISGVMALFYLYKLSM 184
           +AF+K  NSYFA  L+T  S  LT VMGQRY  + KIMPAG+V VIS +M LFYLYK++ 
Sbjct: 50  KAFEKRRNSYFAIFLQTVCSSALTWVMGQRYLTTSKIMPAGIVTVISAMMTLFYLYKIAK 109

Query: 183 GGNHIVKRHE 154
           GGNHI  + E
Sbjct: 110 GGNHIGPKKE 119


>tr|A7P0S6|A7P0S6_VITVI Chromosome chr19 scaffold_4, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00027345001
           PE=4 SV=1
          Length = 119

 Score = 84.7 bits (208), Expect = 2e-15
 Identities = 41/70 (58%), Positives = 51/70 (72%)
 Frame = -1

Query: 363 QAFKKHENSYFAFLLETAISVGLT*VMGQRYQASGKIMPAGMVAVISGVMALFYLYKLSM 184
           +AFKK +NSY A +LET  +  LT VMGQRY  + KIMPAG+VA IS +M  FYLYK++ 
Sbjct: 50  KAFKKKKNSYLALILETVCAAALTWVMGQRYMQTSKIMPAGIVAGISALMTTFYLYKIAT 109

Query: 183 GGNHIVKRHE 154
           GGNHI  + E
Sbjct: 110 GGNHIPTKAE 119


>tr|A9TER4|A9TER4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_169659 PE=4 SV=1
          Length = 119

 Score = 79.7 bits (195), Expect = 7e-14
 Identities = 38/73 (52%), Positives = 52/73 (71%), Gaps = 6/73 (8%)
 Frame = -1

Query: 360 AFKKHEN------SYFAFLLETAISVGLT*VMGQRYQASGKIMPAGMVAVISGVMALFYL 199
           A+K H++      S  A  LET ++V LT VMGQR+  + K MPAGMVA +SG+M+LFYL
Sbjct: 45  AYKSHQDYLRGSKSSLALFLETVVAVALTWVMGQRFMVTSKFMPAGMVAALSGIMSLFYL 104

Query: 198 YKLSMGGNHIVKR 160
           YK++ GGN I+K+
Sbjct: 105 YKVATGGNRIIKK 117


>tr|A9PIM6|A9PIM6_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=4 SV=1
          Length = 119

 Score = 79.0 bits (193), Expect = 1e-13
 Identities = 38/70 (54%), Positives = 50/70 (71%)
 Frame = -1

Query: 363 QAFKKHENSYFAFLLETAISVGLT*VMGQRYQASGKIMPAGMVAVISGVMALFYLYKLSM 184
           +AF+K +NS+    +ET  +  LT VMGQRY  + KIMPAG+VA IS +M LFYLYK++ 
Sbjct: 50  KAFEKRKNSFLGLAIETVCAAILTFVMGQRYMQTSKIMPAGIVAGISALMTLFYLYKIAA 109

Query: 183 GGNHIVKRHE 154
           GGNHI  + E
Sbjct: 110 GGNHIPAKAE 119


>tr|Q9AYA9|Q9AYA9_ORYSA Putative uncharacterized protein
           OSJNBa0004B24.3 OS=Oryza sativa GN=OSJNBa0004B24.3 PE=4
           SV=1
          Length = 119

 Score = 78.2 bits (191), Expect = 2e-13
 Identities = 37/70 (52%), Positives = 50/70 (71%)
 Frame = -1

Query: 363 QAFKKHENSYFAFLLETAISVGLT*VMGQRYQASGKIMPAGMVAVISGVMALFYLYKLSM 184
           + F+K  NSY A  LET  ++ LT VMGQRY  + KIMPAG+VA +S +M+ FYL+K++ 
Sbjct: 50  KTFEKRRNSYLALALETLCALALTYVMGQRYLETSKIMPAGVVAGLSALMSAFYLFKIAT 109

Query: 183 GGNHIVKRHE 154
           GGNHI  + E
Sbjct: 110 GGNHIPPKKE 119


>tr|Q10I13|Q10I13_ORYSJ Os03g0568500 protein OS=Oryza sativa subsp.
           japonica GN=Os03g0568500 PE=4 SV=1
          Length = 119

 Score = 78.2 bits (191), Expect = 2e-13
 Identities = 37/70 (52%), Positives = 50/70 (71%)
 Frame = -1

Query: 363 QAFKKHENSYFAFLLETAISVGLT*VMGQRYQASGKIMPAGMVAVISGVMALFYLYKLSM 184
           + F+K  NSY A  LET  ++ LT VMGQRY  + KIMPAG+VA +S +M+ FYL+K++ 
Sbjct: 50  KTFEKRRNSYLALALETLCALALTYVMGQRYLETSKIMPAGVVAGLSALMSAFYLFKIAT 109

Query: 183 GGNHIVKRHE 154
           GGNHI  + E
Sbjct: 110 GGNHIPPKKE 119


>tr|B8AKU3|B8AKU3_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_12299 PE=4 SV=1
          Length = 119

 Score = 78.2 bits (191), Expect = 2e-13
 Identities = 37/70 (52%), Positives = 50/70 (71%)
 Frame = -1

Query: 363 QAFKKHENSYFAFLLETAISVGLT*VMGQRYQASGKIMPAGMVAVISGVMALFYLYKLSM 184
           + F+K  NSY A  LET  ++ LT VMGQRY  + KIMPAG+VA +S +M+ FYL+K++ 
Sbjct: 50  KTFEKRRNSYLALALETLCALALTYVMGQRYLETSKIMPAGVVAGLSALMSAFYLFKIAT 109

Query: 183 GGNHIVKRHE 154
           GGNHI  + E
Sbjct: 110 GGNHIPPKKE 119


>tr|B6T8F3|B6T8F3_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=4 SV=1
          Length = 120

 Score = 77.0 bits (188), Expect = 4e-13
 Identities = 37/65 (56%), Positives = 48/65 (73%)
 Frame = -1

Query: 363 QAFKKHENSYFAFLLETAISVGLT*VMGQRYQASGKIMPAGMVAVISGVMALFYLYKLSM 184
           +AF+K  NSY A  LET  ++ LT VMGQR+  + KIMPAG VA +S VM+ FYL+K++ 
Sbjct: 50  KAFQKRRNSYVALALETLCALALTYVMGQRFLETSKIMPAGAVAGLSAVMSAFYLFKIAT 109

Query: 183 GGNHI 169
           GGNHI
Sbjct: 110 GGNHI 114


>tr|B7FH11|B7FH11_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 121

 Score = 76.3 bits (186), Expect = 7e-13
 Identities = 37/64 (57%), Positives = 46/64 (71%)
 Frame = -1

Query: 360 AFKKHENSYFAFLLETAISVGLT*VMGQRYQASGKIMPAGMVAVISGVMALFYLYKLSMG 181
           AF K +NSY A  +E   +  LT +MGQRY  + KIMPAGM+A +S +M LFYLYKL+ G
Sbjct: 51  AFGKRKNSYLALAIEILCAGVLTWIMGQRYLQTSKIMPAGMIAGLSALMTLFYLYKLATG 110

Query: 180 GNHI 169
           GNHI
Sbjct: 111 GNHI 114


>tr|Q9LJU6|Q9LJU6_ARATH Emb|CAB68134.1 (Putative uncharacterized
           protein At3g20510) (At3g20510) OS=Arabidopsis thaliana
           GN=At3g20510 PE=4 SV=1
          Length = 119

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 37/70 (52%), Positives = 50/70 (71%)
 Frame = -1

Query: 363 QAFKKHENSYFAFLLETAISVGLT*VMGQRYQASGKIMPAGMVAVISGVMALFYLYKLSM 184
           +AF+K +NS  A +L+T I+  LT VMGQRY  +GKIMPAG+VA IS +M  FY+YK++ 
Sbjct: 50  KAFEKKKNSTIAMVLQTVIAAALTLVMGQRYLLTGKIMPAGLVAGISALMTCFYVYKIAT 109

Query: 183 GGNHIVKRHE 154
           GGN    + E
Sbjct: 110 GGNKFPAKAE 119