BP919933 |
Clone id |
YMU001_000130_H01 |
Library |
YMU01 |
Length |
500 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000130_H01. |
Accession |
BP919933 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL246Contig1 |
Sequence |
CTGGAAAATCAGCGGCTCCTCGGGAATGAGCTGGTCACCTTCATTCTTATGTGACACCTC TTTCTTTGAGGATGCAGCCATCCCCTCTGCTTCGTCGAGGCATTTTAGATCCTTGCTCTG ATCATGCACATGACTGTCTCCATTTGAATCAAAAGTTTGTGTGTTGGAAATAACCACTTG ATTTCCTGGAGCCACAAGACTCCCTTGTCTTTGATCATTATTGTGTACCTGAGGTCTTTG CTTGAGATTGAAATCTTCTCCATCAGCATTTGACACAGCATAATCTTGCATGTCCTCAAG CGCATTGGCAGGCTGCAACTCCTCTGTAGGGGCATCCACCCAGATCTCAGCTAACATTGT TGAGTATCTCTCTGTTCGACCAACAAGAAAATCAAGATGCTTGTCCAGCGCTTTTTTCTT GATGCCTTCAAGCACCATTTGGTGCTTATACATAATCAGCTTTTCAATTTTCGTCCAGAA TTTCTTCACGTCCTTAGAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6ZRS2 |
Definition |
sp|Q6ZRS2|SRCAP_HUMAN Helicase SRCAP OS=Homo sapiens |
Align length |
51 |
Score (bit) |
65.9 |
E-value |
1.0e-10 |
Report |
 |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6ZGY4 |
Definition |
tr|Q6ZGY4|Q6ZGY4_ORYSJ Putative photoperiod independent early flowering1 OS=Oryza sativa subsp. japonica |
Align length |
146 |
Score (bit) |
87.8 |
E-value |
3.0e-16 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919933|Adiantum capillus-veneris mRNA, clone: YMU001_000130_H01. (500 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6ZGY4|Q6ZGY4_ORYSJ Putative photoperiod independent early fl... 88 3e-16 tr|A9S832|A9S832_PHYPA SWR1 complex protein, SNF2 family DNA-dep... 84 4e-15 tr|Q9LTV5|Q9LTV5_ARATH Helicase-like protein OS=Arabidopsis thal... 81 2e-14 tr|Q7X9V2|Q7X9V2_ARATH Photoperiod independent early flowering1 ... 81 2e-14 tr|A9U2Y8|A9U2Y8_PHYPA SWR1 complex protein, SNF2 family DNA-dep... 81 3e-14 tr|B3MBX4|B3MBX4_DROAN GF12812 OS=Drosophila ananassae GN=GF1281... 69 2e-10 tr|Q3U4M6|Q3U4M6_MOUSE Putative uncharacterized protein OS=Mus m... 67 4e-10 tr|B4GI08|B4GI08_DROPE GL16840 OS=Drosophila persimilis GN=GL168... 66 8e-10 tr|Q6P4A2|Q6P4A2_HUMAN SRCAP protein (Fragment) OS=Homo sapiens ... 66 1e-09 tr|B0JZA6|B0JZA6_HUMAN SRCAP protein OS=Homo sapiens GN=SRCAP PE... 66 1e-09 tr|B5E1L0|B5E1L0_DROPS GA24314 OS=Drosophila pseudoobscura pseud... 65 2e-09 tr|B4P902|B4P902_DROYA Domino OS=Drosophila yakuba GN=Dyak\dom P... 65 2e-09 tr|A5AP91|A5AP91_VITVI Putative uncharacterized protein OS=Vitis... 65 2e-09 tr|B3NJL6|B3NJL6_DROER GG22110 OS=Drosophila erecta GN=GG22110 P... 64 4e-09 tr|Q4SFE5|Q4SFE5_TETNG Chromosome 2 SCAF14604, whole genome shot... 63 7e-09 tr|B4QG22|B4QG22_DROSI GD11588 OS=Drosophila simulans GN=GD11588... 63 7e-09 tr|B4MJU2|B4MJU2_DROWI GK20897 OS=Drosophila willistoni GN=GK208... 63 7e-09 tr|B4LLH7|B4LLH7_DROVI GJ20044 OS=Drosophila virilis GN=GJ20044 ... 63 7e-09 tr|B4KRF8|B4KRF8_DROMO GI19071 OS=Drosophila mojavensis GN=GI190... 63 7e-09 tr|B4J6Z7|B4J6Z7_DROGR GH20710 OS=Drosophila grimshawi GN=GH2071... 63 7e-09 tr|Q28EN0|Q28EN0_XENTR Novel protein (Fragment) OS=Xenopus tropi... 63 9e-09 tr|Q8MLW2|Q8MLW2_DROME Domino, isoform D OS=Drosophila melanogas... 62 1e-08 tr|B5RJR0|B5RJR0_DROME LP03212p (Fragment) OS=Drosophila melanog... 62 1e-08 tr|B5RJJ7|B5RJJ7_DROME LD35056p (Fragment) OS=Drosophila melanog... 62 2e-08 tr|B4I7P3|B4I7P3_DROSE GM15831 OS=Drosophila sechellia GN=GM1583... 62 2e-08 tr|B7QDK0|B7QDK0_IXOSC E1A-binding protein p400, putative (Fragm... 60 6e-08 tr|B6MUW8|B6MUW8_BRAFL Putative uncharacterized protein OS=Branc... 60 6e-08 tr|B0WLJ6|B0WLJ6_CULQU E1a binding protein P400 OS=Culex quinque... 60 6e-08 tr|B8AGS2|B8AGS2_ORYSI Putative uncharacterized protein OS=Oryza... 59 1e-07 tr|A3AAA0|A3AAA0_ORYSJ Putative uncharacterized protein OS=Oryza... 59 1e-07
>tr|Q6ZGY4|Q6ZGY4_ORYSJ Putative photoperiod independent early flowering1 OS=Oryza sativa subsp. japonica GN=OJ1743_B12.28 PE=4 SV=1 Length = 2021
Score = 87.8 bits (216), Expect = 3e-16 Identities = 53/146 (36%), Positives = 73/146 (50%) Frame = -3
Query: 498 SKDVKKFWTKIEKLIMYKHQMVLEGIKKKALDKHLDFLVGRTERYSTMLAEIWVDAPTEE 319 SKDVKKFWTKIEKL+ YK+Q+ LE KKKALDK LDFL+G+TERYSTMLA Sbjct: 98 SKDVKKFWTKIEKLVFYKNQLELEERKKKALDKQLDFLLGQTERYSTMLA---------- 147
Query: 318 LQPANALEDMQDYAVSNADGEDFNLKQRPQVHNNDQRQGSLVAPGNQVVISNTQTFDSNG 139 E++ D + N + + QR Q + + + + N + D Sbjct: 148 -------ENLVDVRLQNQENDSLQTNQRSQQELAQEN----INASSPTDVDNVEIDDDYN 196
Query: 138 DSHVHDQSKDLKCLDEAEGMAASSKK 61 S + D +DE E +++ Sbjct: 197 SSLGEEPKDDEHTIDEDEAQITEAER 222
>tr|A9S832|A9S832_PHYPA SWR1 complex protein, SNF2 family DNA-dependent ATPase (Fragment) OS=Physcomitrella patens subsp. patens GN=CHR1515 PE=4 SV=1 Length = 1780
Score = 84.0 bits (206), Expect = 4e-15 Identities = 39/58 (67%), Positives = 48/58 (82%) Frame = -3
Query: 498 SKDVKKFWTKIEKLIMYKHQMVLEGIKKKALDKHLDFLVGRTERYSTMLAEIWVDAPT 325 +KDVKKFW K++KL+ YK Q+++E KKKALDKHLDFL+G+TERYSTMLAE D T Sbjct: 84 AKDVKKFWLKVDKLVSYKQQLLVEERKKKALDKHLDFLLGQTERYSTMLAENLADNTT 141
>tr|Q9LTV5|Q9LTV5_ARATH Helicase-like protein OS=Arabidopsis thaliana PE=4 SV=1 Length = 2061
Score = 81.3 bits (199), Expect = 2e-14 Identities = 37/55 (67%), Positives = 47/55 (85%) Frame = -3
Query: 498 SKDVKKFWTKIEKLIMYKHQMVLEGIKKKALDKHLDFLVGRTERYSTMLAEIWVD 334 SKD+KKFW K+EKL++YKHQ+V KKKA+DK L+FL+G+TERYSTMLAE V+ Sbjct: 110 SKDMKKFWMKVEKLVLYKHQLVRNEKKKKAMDKQLEFLLGQTERYSTMLAENLVE 164
>tr|Q7X9V2|Q7X9V2_ARATH Photoperiod independent early flowering1 OS=Arabidopsis thaliana GN=PIE1 PE=1 SV=1 Length = 2055
Score = 81.3 bits (199), Expect = 2e-14 Identities = 37/55 (67%), Positives = 47/55 (85%) Frame = -3
Query: 498 SKDVKKFWTKIEKLIMYKHQMVLEGIKKKALDKHLDFLVGRTERYSTMLAEIWVD 334 SKD+KKFW K+EKL++YKHQ+V KKKA+DK L+FL+G+TERYSTMLAE V+ Sbjct: 110 SKDMKKFWMKVEKLVLYKHQLVRNEKKKKAMDKQLEFLLGQTERYSTMLAENLVE 164
>tr|A9U2Y8|A9U2Y8_PHYPA SWR1 complex protein, SNF2 family DNA-dependent ATPase (Fragment) OS=Physcomitrella patens subsp. patens GN=CHR1545 PE=4 SV=1 Length = 1727
Score = 80.9 bits (198), Expect = 3e-14 Identities = 43/69 (62%), Positives = 53/69 (76%), Gaps = 2/69 (2%) Frame = -3
Query: 498 SKDVKKFWTKIEKLIMYKHQMVLEGIKKKALDKHLDFLVGRTE-RYSTMLAEIWVDAPTE 322 +KDV+KFW K+EKL+ YK Q+++E KKKALDKHLDFL+G+TE RYSTMLAE D T Sbjct: 71 AKDVRKFWLKVEKLVSYKQQLLVEERKKKALDKHLDFLLGQTESRYSTMLAENLADTTTT 130
Query: 321 -ELQPANAL 298 ELQ + L Sbjct: 131 YELQISQPL 139
>tr|B3MBX4|B3MBX4_DROAN GF12812 OS=Drosophila ananassae GN=GF12812 PE=4 SV=1 Length = 3199
Score = 68.6 bits (166), Expect = 2e-10 Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 35/198 (17%) Frame = -3
Query: 498 SKDVKKFWTKIEKLIMYKHQMVLEGIKKKALDKHLDFLVGRTERYSTMLAE----IWVDA 331 +K+VK FW+ +EKL+ YKHQ +E +K+ALD+HL F+V +TE++S LAE D Sbjct: 580 AKEVKSFWSNVEKLVEYKHQTKIEEKRKQALDQHLSFIVDQTEKFSQQLAEGMNKSVADT 639
Query: 330 PT--------------EELQPANALEDMQDYAVSNADGEDFNLKQRPQV----------- 226 P+ +E +P + ED ++ ++ A+ E ++K+ Sbjct: 640 PSLNSSRLTSPKRDSDDEFRPESGSEDDEE-TIAKAEEEAADVKEEVTALAKESEMDFDD 698
Query: 225 HNNDQRQGSL-----VAPGNQVVISNTQTFDSNGDSHVHDQSKDLKCLDE-AEGMAASSK 64 ND G L + Q T+T D + DS ++K+ DE ++ Sbjct: 699 FLNDLPPGYLENRDKLMKEEQTASIKTETPDESDDSEF--EAKEASDDDENTISKQEEAE 756
Query: 63 KEVSHKNEGDQLIPEEPL 10 +E+ HK E D+L + L Sbjct: 757 QEIDHKKEIDELEADNDL 774
>tr|Q3U4M6|Q3U4M6_MOUSE Putative uncharacterized protein OS=Mus musculus GN=Srcap PE=2 SV=1 Length = 936
Score = 67.4 bits (163), Expect = 4e-10 Identities = 35/102 (34%), Positives = 58/102 (56%), Gaps = 6/102 (5%) Frame = -3
Query: 498 SKDVKKFWTKIEKLIMYKHQMVLEGIKKKALDKHLDFLVGRTERYSTMLAEIWVDAPTEE 319 +KDV++FW+ +EK++ +K Q LE +KKALD HLDF+VG+TE+YS +L++ P Sbjct: 180 AKDVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFIVGQTEKYSDLLSQSLNQPPASS 239
Query: 318 LQPANALEDMQDYA------VSNADGEDFNLKQRPQVHNNDQ 211 ++ A VS D ED + + + + +D+ Sbjct: 240 KAGSSPCLGSSSAASSPPPPVSRLDDEDGDFQPQEEEEEDDE 281
>tr|B4GI08|B4GI08_DROPE GL16840 OS=Drosophila persimilis GN=GL16840 PE=4 SV=1 Length = 1076
Score = 66.2 bits (160), Expect = 8e-10 Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 43/206 (20%) Frame = -3
Query: 498 SKDVKKFWTKIEKLIMYKHQMVLEGIKKKALDKHLDFLVGRTERYSTMLAE-----IWVD 334 +++VK FW+ +EKL+ YKHQ +E +K+ALD+HL+F+VG+TE++S L E + D Sbjct: 593 AREVKCFWSNVEKLVEYKHQTKIEEKRKQALDQHLNFIVGQTEKFSQQLVEGMNKSMAAD 652
Query: 333 APT----------------EELQPANALEDMQDYAV-------------------SNADG 259 P+ E +P + ED ++ S D Sbjct: 653 TPSLSLNSSRLTSPKRESDVEFRPESGSEDDEETIAKAEEEAADVNEEVTALAKESEMDF 712
Query: 258 EDFNLKQRP--QVHNNDQRQGSLVAPGNQVVISNTQTFDSNGDSHVHDQSKDLKCLDE-A 88 +DF LK P + N D+ + V DS+GD ++K+ DE Sbjct: 713 DDF-LKDLPPGYLDNRDKLINEQEHTTSAVKSETHDEEDSDGDDDSEFEAKEASEDDENT 771
Query: 87 EGMAASSKKEVSHKNEGDQLIPEEPL 10 +++E+ HK E D+L + L Sbjct: 772 ISKQEEAEQEIDHKREIDELEADNDL 797
>tr|Q6P4A2|Q6P4A2_HUMAN SRCAP protein (Fragment) OS=Homo sapiens GN=SRCAP PE=2 SV=1 Length = 584
Score = 65.9 bits (159), Expect = 1e-09 Identities = 27/51 (52%), Positives = 42/51 (82%) Frame = -3
Query: 498 SKDVKKFWTKIEKLIMYKHQMVLEGIKKKALDKHLDFLVGRTERYSTMLAE 346 +KDV++FW+ +EK++ +K Q LE +KKALD HLDF+VG+TE+YS +L++ Sbjct: 199 AKDVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFIVGQTEKYSDLLSQ 249
>tr|B0JZA6|B0JZA6_HUMAN SRCAP protein OS=Homo sapiens GN=SRCAP PE=2 SV=1 Length = 3049
Score = 65.9 bits (159), Expect = 1e-09 Identities = 27/51 (52%), Positives = 42/51 (82%) Frame = -3
Query: 498 SKDVKKFWTKIEKLIMYKHQMVLEGIKKKALDKHLDFLVGRTERYSTMLAE 346 +KDV++FW+ +EK++ +K Q LE +KKALD HLDF+VG+TE+YS +L++ Sbjct: 176 AKDVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFIVGQTEKYSDLLSQ 226
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