BP919938
Clone id YMU001_000130_H06
Library
Length 384
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000130_H06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TAACTTCATCAGATCAATAGCAACTTCTCGTTCCATGTTTACTTCATCAGAAGATGCTGT
GCAACTTCATGCTAGTACATCCATCAATAGCCCAAATGACAGTGCATTGCTCACTCATAT
CGTTGCACTGAAAGGCATTGTTCGCTTTGCATGTGTTGATAATGAGGACGGCATTGTATT
TGGGCATAGCACAACATGCTGCTACTTGGATGCAGGCAGCCGTTTCCTAATCTGTATCAT
TTTCTCCAATTCTTCTGCTCCTCCTATTCGCGCTTCTAGCTCCTGAGGTCCAAGAAACAA
TCCAAATGGGACACCTCTGAACTTGTCAGCATGATGAAGCTGATGTGCAGCCGCTACTTT
CTGGAAGTAGGGAACATCTCCAAT
■■Homology search results ■■ -
sp_hit_id Q8SPR7
Definition sp|Q8SPR7|PLCD4_PIG 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-4 OS=Sus scrofa
Align length 42
Score (bit) 29.3
E-value 6.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919938|Adiantum capillus-veneris mRNA, clone:
YMU001_000130_H06.
(384 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8SPR7|PLCD4_PIG 1-phosphatidylinositol-4,5-bisphosphate phos... 29 6.3
sp|Q5WTH5|GREA_LEGPL Transcription elongation factor greA OS=Leg... 29 6.3
sp|Q5ZS95|GREA_LEGPH Transcription elongation factor greA OS=Leg... 29 6.3
sp|A5IAV2|GREA_LEGPC Transcription elongation factor greA OS=Leg... 29 6.3
sp|Q5X1R6|GREA_LEGPA Transcription elongation factor greA OS=Leg... 29 6.3
sp|Q3Z7V5|DAPB_DEHE1 Dihydrodipicolinate reductase OS=Dehalococc... 29 6.3
sp|Q5SM28|SYP_THET8 Prolyl-tRNA synthetase OS=Thermus thermophil... 29 8.4
sp|Q72GF9|SYP_THET2 Prolyl-tRNA synthetase OS=Thermus thermophil... 29 8.4

>sp|Q8SPR7|PLCD4_PIG 1-phosphatidylinositol-4,5-bisphosphate
phosphodiesterase delta-4 OS=Sus scrofa GN=PLCD4 PE=2
SV=1
Length = 772

Score = 29.3 bits (64), Expect = 6.3
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2

Query: 86 NSPNDSALLTHIVALKGIVRFACVDNEDGIVFGHSTTCCYLD 211
+ P+DS L H+++L G + + C ++DG +F + Y D
Sbjct: 259 HEPSDSGKLRHVLSLDGFLSYLC--SKDGDIFNPTCLPIYQD 298


>sp|Q5WTH5|GREA_LEGPL Transcription elongation factor greA
OS=Legionella pneumophila (strain Lens) GN=greA PE=3
SV=1
Length = 160

Score = 29.3 bits (64), Expect = 6.3
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +2

Query: 8 IRSIATSRSMFTSSEDAVQLHASTSINSPNDSAL--LTHIVALKGIVRFACVDNEDGIVF 181
+ +IAT+R+ E+A + HA+ S N+ + L ++ I+ + + N ++F
Sbjct: 30 VEAIATARAHGDLKENA-EYHAAREQQSFNEGRIQELEAKLSHAQIIDISKLPNNGKVIF 88

Query: 182 GHSTTCCYLDAGSRFLICII 241
G + T C++ GS I+
Sbjct: 89 GSTVTICHVATGSELTYKIV 108


>sp|Q5ZS95|GREA_LEGPH Transcription elongation factor greA
OS=Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 / ATCC 33152 / DSM 7513) GN=greA PE=3
SV=1
Length = 160

Score = 29.3 bits (64), Expect = 6.3
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +2

Query: 8 IRSIATSRSMFTSSEDAVQLHASTSINSPNDSAL--LTHIVALKGIVRFACVDNEDGIVF 181
+ +IAT+R+ E+A + HA+ S N+ + L ++ I+ + + N ++F
Sbjct: 30 VEAIATARAHGDLKENA-EYHAAREQQSFNEGRIQELEAKLSHAQIIDISKLPNNGKVIF 88

Query: 182 GHSTTCCYLDAGSRFLICII 241
G + T C++ GS I+
Sbjct: 89 GSTVTICHVATGSELTYKIV 108


>sp|A5IAV2|GREA_LEGPC Transcription elongation factor greA
OS=Legionella pneumophila (strain Corby) GN=greA PE=3
SV=1
Length = 160

Score = 29.3 bits (64), Expect = 6.3
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +2

Query: 8 IRSIATSRSMFTSSEDAVQLHASTSINSPNDSAL--LTHIVALKGIVRFACVDNEDGIVF 181
+ +IAT+R+ E+A + HA+ S N+ + L ++ I+ + + N ++F
Sbjct: 30 VEAIATARAHGDLKENA-EYHAAREQQSFNEGRIQELEAKLSHAQIIDISKLPNNGKVIF 88

Query: 182 GHSTTCCYLDAGSRFLICII 241
G + T C++ GS I+
Sbjct: 89 GSTVTICHVATGSELTYKIV 108


>sp|Q5X1R6|GREA_LEGPA Transcription elongation factor greA
OS=Legionella pneumophila (strain Paris) GN=greA PE=3
SV=1
Length = 160

Score = 29.3 bits (64), Expect = 6.3
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +2

Query: 8 IRSIATSRSMFTSSEDAVQLHASTSINSPNDSAL--LTHIVALKGIVRFACVDNEDGIVF 181
+ +IAT+R+ E+A + HA+ S N+ + L ++ I+ + + N ++F
Sbjct: 30 VEAIATARAHGDLKENA-EYHAAREQQSFNEGRIQELEAKLSHAQIIDISKLPNNGKVIF 88

Query: 182 GHSTTCCYLDAGSRFLICII 241
G + T C++ GS I+
Sbjct: 89 GSTVTICHVATGSELTYKIV 108


>sp|Q3Z7V5|DAPB_DEHE1 Dihydrodipicolinate reductase
OS=Dehalococcoides ethenogenes (strain 195) GN=dapB PE=3
SV=1
Length = 263

Score = 29.3 bits (64), Expect = 6.3
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2

Query: 17 IATSRSMFTSSEDAVQLHASTSINSPNDSALLTHIVALK 133
+A S F +S + ++LH ++SP+ +AL T LK
Sbjct: 136 LAQEASRFLASAEVIELHHDKKLDSPSGTALATAAAMLK 174


>sp|Q5SM28|SYP_THET8 Prolyl-tRNA synthetase OS=Thermus thermophilus
(strain HB8 / ATCC 27634 / DSM 579) GN=proS PE=1 SV=1
Length = 477

Score = 28.9 bits (63), Expect = 8.4
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 7/36 (19%)
Frame = -1

Query: 333 HADKFRGVPFGLFLGPQELE-------ARIGGAEEL 247
H + +GVPF + LGP++LE +R+GG E L
Sbjct: 337 HEWELKGVPFRVELGPKDLEGGQAVLASRLGGKETL 372


>sp|Q72GF9|SYP_THET2 Prolyl-tRNA synthetase OS=Thermus thermophilus
(strain HB27 / ATCC BAA-163 / DSM 7039) GN=proS PE=3
SV=1
Length = 477

Score = 28.9 bits (63), Expect = 8.4
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 7/36 (19%)
Frame = -1

Query: 333 HADKFRGVPFGLFLGPQELE-------ARIGGAEEL 247
H + +GVPF + LGP++LE +R+GG E L
Sbjct: 337 HEWELKGVPFRVELGPKDLEQGQAVLASRLGGKETL 372


tr_hit_id Q0H902
Definition tr|Q0H902|Q0H902_COFCA Beta-carotene hydroxylase OS=Coffea canephora
Align length 56
Score (bit) 83.6
E-value 5.0e-15
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919938|Adiantum capillus-veneris mRNA, clone:
YMU001_000130_H06.
(384 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q0H902|Q0H902_COFCA Beta-carotene hydroxylase OS=Coffea canep... 84 5e-15
tr|Q0H8Z8|Q0H8Z8_COFAR Beta-carotene hydroxylase OS=Coffea arabi... 84 5e-15
tr|Q9FUN2|Q9FUN2_CITUN Beta-carotene hydroxylase OS=Citrus unshi... 82 1e-14
tr|Q9FUB9|Q9FUB9_CITUN Beta-carotene hydroxylase OS=Citrus unshi... 82 1e-14
tr|Q0QVY5|Q0QVY5_CITSI Carotenoid beta-ring hydroxylase OS=Citru... 82 1e-14
tr|A0AQW2|A0AQW2_9ROSI Beta-carotene hydroxylase OS=Citrus kinok... 82 1e-14
tr|Q06AR9|Q06AR9_9MAGN Beta-carotene hydroxylase 1 OS=Adonis aes... 82 1e-14
tr|A1EC28|A1EC28_9MAGN Beta-carotene hydroxylase OS=Adonis aesti... 82 1e-14
tr|A9RNT1|A9RNT1_PHYPA Predicted protein OS=Physcomitrella paten... 82 2e-14
tr|Q9S6Y0|Q9S6Y0_SOLLC Beta-carotene hydroxylase (Fragment) OS=S... 81 2e-14
tr|Q0Q453|Q0Q453_SOLLC Chromoplast beta-carotene hydroxylase OS=... 81 2e-14
tr|Q0GGX1|Q0GGX1_SOLLC Carotene beta-hydroxylase OS=Solanum lyco... 81 2e-14
tr|A7QG65|A7QG65_VITVI Chromosome undetermined scaffold_91, whol... 81 2e-14
tr|A5BAC3|A5BAC3_VITVI Putative uncharacterized protein OS=Vitis... 81 2e-14
tr|Q6QM25|Q6QM25_CITSI Beta-carotene hydroxylase (Fragment) OS=C... 81 3e-14
tr|A9RP83|A9RP83_PHYPA Predicted protein (Fragment) OS=Physcomit... 80 4e-14
tr|A9NXM1|A9NXM1_PICSI Putative uncharacterized protein OS=Picea... 80 4e-14
tr|Q9FY13|Q9FY13_NARPS Beta-carotene hydroxylase OS=Narcissus ps... 80 5e-14
tr|Q5IT33|Q5IT33_9MAGN Beta-ring oxygenase AdKeto1 (Fragment) OS... 80 5e-14
tr|A2Z9P0|A2Z9P0_ORYSI Putative uncharacterized protein OS=Oryza... 80 5e-14
tr|Q9LTG0|Q9LTG0_ARATH Beta-carotene hydroxylase OS=Arabidopsis ... 80 7e-14
tr|Q6QE72|Q6QE72_BRACM Putative beta-carotene hydroxylase OS=Bra... 80 7e-14
tr|B4YYC1|B4YYC1_THEHA ST5-18-1 (Fragment) OS=Thellungiella halo... 80 7e-14
tr|B3H4E9|B3H4E9_ARATH Uncharacterized protein At5g52570.2 OS=Ar... 80 7e-14
tr|Q9SZZ8|Q9SZZ8_ARATH Beta-carotene hydroxylase OS=Arabidopsis ... 79 9e-14
tr|Q96297|Q96297_ARATH Beta-carotene hydroxylase (Fragment) OS=A... 79 9e-14
tr|Q8VXP2|Q8VXP2_CROSA Beta-carotene hydroxylase OS=Crocus sativ... 79 9e-14
tr|Q2HXK4|Q2HXK4_CHRMO Beta-carotene hydroxylase OS=Chrysanthemu... 79 9e-14
tr|Q10SE7|Q10SE7_ORYSJ Beta-carotene hydroxylase, putative, expr... 79 9e-14
tr|Q0DVK9|Q0DVK9_ORYSJ Os03g0125100 protein OS=Oryza sativa subs... 79 9e-14

>tr|Q0H902|Q0H902_COFCA Beta-carotene hydroxylase OS=Coffea
canephora GN=bCHY PE=2 SV=1
Length = 310

Score = 83.6 bits (205), Expect = 5e-15
Identities = 40/56 (71%), Positives = 48/56 (85%)
Frame = -1

Query: 384 IGDVPYFQKVAAAHQLHHADKFRGVPFGLFLGPQELEARIGGAEELEKMIQIRKRL 217
I +VPYF++VAAAHQLHH+DKF GVPFGLFLGP+ELE ++GG EELEK I R +L
Sbjct: 252 IANVPYFRRVAAAHQLHHSDKFNGVPFGLFLGPKELE-KVGGLEELEKEINRRIKL 306


>tr|Q0H8Z8|Q0H8Z8_COFAR Beta-carotene hydroxylase OS=Coffea arabica
GN=bCHY PE=2 SV=1
Length = 310

Score = 83.6 bits (205), Expect = 5e-15
Identities = 40/56 (71%), Positives = 48/56 (85%)
Frame = -1

Query: 384 IGDVPYFQKVAAAHQLHHADKFRGVPFGLFLGPQELEARIGGAEELEKMIQIRKRL 217
I +VPYF++VAAAHQLHH+DKF GVPFGLFLGP+ELE ++GG EELEK I R +L
Sbjct: 252 IANVPYFRRVAAAHQLHHSDKFNGVPFGLFLGPKELE-KVGGLEELEKEINRRIKL 306


>tr|Q9FUN2|Q9FUN2_CITUN Beta-carotene hydroxylase OS=Citrus unshiu
GN=CHX1 PE=2 SV=1
Length = 311

Score = 82.4 bits (202), Expect = 1e-14
Identities = 39/53 (73%), Positives = 45/53 (84%)
Frame = -1

Query: 384 IGDVPYFQKVAAAHQLHHADKFRGVPFGLFLGPQELEARIGGAEELEKMIQIR 226
I DVPYF++VAAAHQLHH+DKF GVP+GLFLGP+ELE +GG EELEK I R
Sbjct: 251 IADVPYFRRVAAAHQLHHSDKFHGVPYGLFLGPKELE-EVGGLEELEKEISKR 302


>tr|Q9FUB9|Q9FUB9_CITUN Beta-carotene hydroxylase OS=Citrus unshiu
GN=CHX2 PE=2 SV=1
Length = 311

Score = 82.4 bits (202), Expect = 1e-14
Identities = 39/53 (73%), Positives = 45/53 (84%)
Frame = -1

Query: 384 IGDVPYFQKVAAAHQLHHADKFRGVPFGLFLGPQELEARIGGAEELEKMIQIR 226
I DVPYF++VAAAHQLHH+DKF GVP+GLFLGP+ELE +GG EELEK I R
Sbjct: 251 IADVPYFRRVAAAHQLHHSDKFHGVPYGLFLGPKELE-EVGGLEELEKEISKR 302


>tr|Q0QVY5|Q0QVY5_CITSI Carotenoid beta-ring hydroxylase OS=Citrus
sinensis GN=Chyb PE=2 SV=1
Length = 311

Score = 82.4 bits (202), Expect = 1e-14
Identities = 39/53 (73%), Positives = 45/53 (84%)
Frame = -1

Query: 384 IGDVPYFQKVAAAHQLHHADKFRGVPFGLFLGPQELEARIGGAEELEKMIQIR 226
I DVPYF++VAAAHQLHH+DKF GVP+GLFLGP+ELE +GG EELEK I R
Sbjct: 251 IADVPYFRRVAAAHQLHHSDKFHGVPYGLFLGPKELE-EVGGLEELEKEISKR 302


>tr|A0AQW2|A0AQW2_9ROSI Beta-carotene hydroxylase OS=Citrus kinokuni
GN=chy PE=4 SV=1
Length = 311

Score = 82.4 bits (202), Expect = 1e-14
Identities = 39/53 (73%), Positives = 45/53 (84%)
Frame = -1

Query: 384 IGDVPYFQKVAAAHQLHHADKFRGVPFGLFLGPQELEARIGGAEELEKMIQIR 226
I DVPYF++VAAAHQLHH+DKF GVP+GLFLGP+ELE +GG EELEK I R
Sbjct: 251 IADVPYFRRVAAAHQLHHSDKFHGVPYGLFLGPKELE-EVGGLEELEKEISKR 302


>tr|Q06AR9|Q06AR9_9MAGN Beta-carotene hydroxylase 1 OS=Adonis
aestivalis var. palaestina PE=2 SV=1
Length = 309

Score = 82.0 bits (201), Expect = 1e-14
Identities = 41/59 (69%), Positives = 50/59 (84%), Gaps = 1/59 (1%)
Frame = -1

Query: 384 IGDVPYFQKVAAAHQLHHADKFRGVPFGLFLGPQELEARIGGAEELEKMIQIR-KRLPA 211
I +VPYF+KVAAAHQ+HH DKF+GVP+GLFLGP+ELE +GG EELEK I+ R KR+ A
Sbjct: 251 IANVPYFRKVAAAHQIHHTDKFQGVPYGLFLGPKELE-EVGGNEELEKEIERRIKRMNA 308


>tr|A1EC28|A1EC28_9MAGN Beta-carotene hydroxylase OS=Adonis
aestivalis PE=2 SV=1
Length = 309

Score = 82.0 bits (201), Expect = 1e-14
Identities = 41/59 (69%), Positives = 50/59 (84%), Gaps = 1/59 (1%)
Frame = -1

Query: 384 IGDVPYFQKVAAAHQLHHADKFRGVPFGLFLGPQELEARIGGAEELEKMIQIR-KRLPA 211
I +VPYF+KVAAAHQ+HH DKF+GVP+GLFLGP+ELE +GG EELEK I+ R KR+ A
Sbjct: 251 IANVPYFRKVAAAHQIHHTDKFQGVPYGLFLGPKELE-EVGGNEELEKEIERRIKRMNA 308


>tr|A9RNT1|A9RNT1_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_204215 PE=4 SV=1
Length = 152

Score = 81.6 bits (200), Expect = 2e-14
Identities = 39/53 (73%), Positives = 44/53 (83%)
Frame = -1

Query: 384 IGDVPYFQKVAAAHQLHHADKFRGVPFGLFLGPQELEARIGGAEELEKMIQIR 226
I DVPY QKVAAAHQLHHAD F GVP+GLFLGPQELE +GG EEL+K++ R
Sbjct: 95 IADVPYLQKVAAAHQLHHADLFEGVPYGLFLGPQELE-DVGGEEELQKLLVTR 146


>tr|Q9S6Y0|Q9S6Y0_SOLLC Beta-carotene hydroxylase (Fragment)
OS=Solanum lycopersicum GN=CrtR-b2 PE=2 SV=2
Length = 314

Score = 81.3 bits (199), Expect = 2e-14
Identities = 39/60 (65%), Positives = 50/60 (83%)
Frame = -1

Query: 384 IGDVPYFQKVAAAHQLHHADKFRGVPFGLFLGPQELEARIGGAEELEKMIQIRKRLPASK 205
I +VPYF++VAAAHQLHH+DKF GVP+GLFLGP+ELE +GG EELEK ++ +R+ SK
Sbjct: 255 IANVPYFRRVAAAHQLHHSDKFDGVPYGLFLGPKELE-EVGGLEELEK--EVNRRIKISK 311