BP919940 |
Clone id |
YMU001_000130_H08 |
Library |
YMU01 |
Length |
531 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000130_H08. |
Accession |
BP919940 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL868Contig1 |
Sequence |
GCCCTCTGATCCATTTTGCAAAGACAGGATACATCACAGTTTCACTGGTTGGACGGATAG CAATAGGAACCTCTAAATCCGTATTTCCAGATTTGGTTACCCATGCAACCTCAGGAGCAA AGCCCTCAATATGATCCTTTTCTTTTGTCAAGGCTTGTTCAGACACAAAAAGAGGAAAAT AAGAATTCTGAATCCCAATTTTCTTTATCTCTGCATCAAAAAAATCCTTCAACATTTCCC ATATTGCATATGACCATGGACGCAAGATATAGCATCCTGAAACATCGTAGTATTCGATCA TTCCACTCTTCACAACCACCTCTGAATACCAGTCTCCAAAATTGTCATTCTTCTTTATGG TCATACCGAGCTTTGTCTCTTTCTTGACCTCTTTTCCGGTGGGTGCAACTTCCTTCTTCT CCTTTGGAACCTTCTTCGCGCTCTCCTTCTTTGGTATAGGCTTGAGACCATTCTGCAGCT CGTCCCCTTTCATCTCGGTGCTCATCGTCACGCCTCTGAGTCAATCACCTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8CGC7 |
Definition |
sp|Q8CGC7|SYEP_MOUSE Bifunctional aminoacyl-tRNA synthetase OS=Mus musculus |
Align length |
131 |
Score (bit) |
210.0 |
E-value |
4.0e-54 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RFZ3 |
Definition |
tr|A9RFZ3|A9RFZ3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
131 |
Score (bit) |
233.0 |
E-value |
5.0e-60 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919940|Adiantum capillus-veneris mRNA, clone: YMU001_000130_H08. (531 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RFZ3|A9RFZ3_PHYPA Predicted protein OS=Physcomitrella paten... 233 5e-60 tr|Q2QS12|Q2QS12_ORYSJ Bifunctional aminoacyl-tRNA synthetase, p... 223 4e-57 tr|Q2QS11|Q2QS11_ORYSJ cDNA clone:001-044-H01, full insert seque... 223 4e-57 tr|Q0INI9|Q0INI9_ORYSJ Os12g0443700 protein (Fragment) OS=Oryza ... 223 4e-57 tr|B8BPH6|B8BPH6_ORYSI Putative uncharacterized protein OS=Oryza... 223 4e-57 tr|B7SDH3|B7SDH3_ORYSJ Aminoacyl-tRNA synthase OS=Oryza sativa s... 223 4e-57 tr|A3CH13|A3CH13_ORYSJ Putative uncharacterized protein OS=Oryza... 223 4e-57 tr|A9PFZ9|A9PFZ9_POPTR Putative uncharacterized protein OS=Popul... 219 5e-56 tr|A7Q0Z4|A7Q0Z4_VITVI Chromosome chr7 scaffold_42, whole genome... 216 6e-55 tr|Q9M1R2|Q9M1R2_ARATH Multifunctional aminoacyl-tRNA ligase-lik... 214 2e-54 tr|Q6TXE9|Q6TXE9_RAT LRRGT00050 OS=Rattus norvegicus GN=Eprs PE=... 207 3e-52 tr|Q76KD2|Q76KD2_ORYLA Glutamyl-prolyl-tRNA synthetase (Fragment... 204 2e-51 tr|Q5I0H2|Q5I0H2_RAT Eprs protein (Fragment) OS=Rattus norvegicu... 204 2e-51 tr|Q5ZJ86|Q5ZJ86_CHICK Putative uncharacterized protein OS=Gallu... 204 3e-51 tr|B6PUY6|B6PUY6_BRAFL Putative uncharacterized protein OS=Branc... 202 7e-51 tr|B6L487|B6L487_BRAFL Putative uncharacterized protein OS=Branc... 202 7e-51 tr|B1WBE0|B1WBE0_XENLA LOC100158438 protein OS=Xenopus laevis GN... 202 1e-50 tr|B3RQG2|B3RQG2_TRIAD Putative uncharacterized protein OS=Trich... 201 1e-50 tr|B1H1R9|B1H1R9_XENLA LOC100158287 protein OS=Xenopus laevis GN... 201 2e-50 tr|B0BMK2|B0BMK2_XENTR LOC100145057 protein (Fragment) OS=Xenopu... 201 2e-50 tr|A8PJX1|A8PJX1_BRUMA Bifunctional aminoacyl-tRNA synthetase, p... 200 4e-50 tr|A4RYY0|A4RYY0_OSTLU Predicted protein OS=Ostreococcus lucimar... 199 6e-50 tr|Q016X8|Q016X8_OSTTA Multifunctional aminoacyl-tRNA ligase-lik... 199 9e-50 tr|Q4DLK5|Q4DLK5_TRYCR Prolyl-tRNA synthetase, putative OS=Trypa... 197 4e-49 tr|B7PKR5|B7PKR5_IXOSC Glutamyl-tRNA synthetase, cytoplasmic, pu... 196 5e-49 tr|Q4DZZ4|Q4DZZ4_TRYCR Prolyl-tRNA synthetase, putative OS=Trypa... 196 6e-49 tr|B6K068|B6K068_SCHJP Cytoplasmic proline-tRNA ligase Prs1 OS=S... 196 8e-49 tr|B8LCI1|B8LCI1_THAPS Prolyl-trna synthetase (Fragment) OS=Thal... 194 2e-48 tr|Q4S8E3|Q4S8E3_TETNG Chromosome undetermined SCAF14706, whole ... 194 3e-48 tr|Q388V7|Q388V7_9TRYP Prolyl-trna synthetase, putative OS=Trypa... 193 4e-48
>tr|A9RFZ3|A9RFZ3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_113773 PE=3 SV=1 Length = 544
Score = 233 bits (594), Expect = 5e-60 Identities = 104/131 (79%), Positives = 123/131 (93%) Frame = -3
Query: 394 KEVKKETKLGMTIKKNDNFGDWYSEVVVKSGMIEYYDVSGCYILRPWSYAIWEMLKDFFD 215 KEVKKE+ LG+ KK++NFG+WYS+VVV+ MIEYYDVSGCYILRPWSY+IWE +KDFFD Sbjct: 54 KEVKKESGLGLAFKKDENFGEWYSDVVVRGEMIEYYDVSGCYILRPWSYSIWESIKDFFD 113
Query: 214 AEIKKIGIQNSYFPLFVSEQALTKEKDHIEGFAPEVAWVTKSGNTDLEVPIAIRPTSETV 35 EIKK+GI+N+YFPLFVSE+ALTKEKDH+EGFAPEVAWVT+SG+++LE PIAIRPTSETV Sbjct: 114 KEIKKMGIENTYFPLFVSEKALTKEKDHVEGFAPEVAWVTRSGDSELEEPIAIRPTSETV 173
Query: 34 MYPVFAKWIRG 2 MYP+FAKWIRG Sbjct: 174 MYPIFAKWIRG 184
>tr|Q2QS12|Q2QS12_ORYSJ Bifunctional aminoacyl-tRNA synthetase, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os12g25710 PE=3 SV=1 Length = 489
Score = 223 bits (569), Expect = 4e-57 Identities = 103/130 (79%), Positives = 115/130 (88%) Frame = -3
Query: 394 KEVKKETKLGMTIKKNDNFGDWYSEVVVKSGMIEYYDVSGCYILRPWSYAIWEMLKDFFD 215 KEVKKETKLGM KK+DNFG+WYSEVVV S MIEYYD+SGCYILRPW+ IWE+LK+FFD Sbjct: 19 KEVKKETKLGMAYKKDDNFGEWYSEVVVNSEMIEYYDISGCYILRPWAMEIWELLKEFFD 78
Query: 214 AEIKKIGIQNSYFPLFVSEQALTKEKDHIEGFAPEVAWVTKSGNTDLEVPIAIRPTSETV 35 AEIKK+ ++ YFPLFV+E L KEKDHIEGFAPEVAWVTKSG +DLE PIAIRPTSETV Sbjct: 79 AEIKKLKLKPYYFPLFVTENVLQKEKDHIEGFAPEVAWVTKSGKSDLEAPIAIRPTSETV 138
Query: 34 MYPVFAKWIR 5 MYP F+KWIR Sbjct: 139 MYPYFSKWIR 148
>tr|Q2QS11|Q2QS11_ORYSJ cDNA clone:001-044-H01, full insert sequence OS=Oryza sativa subsp. japonica GN=LOC_Os12g25710 PE=2 SV=1 Length = 510
Score = 223 bits (569), Expect = 4e-57 Identities = 103/130 (79%), Positives = 115/130 (88%) Frame = -3
Query: 394 KEVKKETKLGMTIKKNDNFGDWYSEVVVKSGMIEYYDVSGCYILRPWSYAIWEMLKDFFD 215 KEVKKETKLGM KK+DNFG+WYSEVVV S MIEYYD+SGCYILRPW+ IWE+LK+FFD Sbjct: 19 KEVKKETKLGMAYKKDDNFGEWYSEVVVNSEMIEYYDISGCYILRPWAMEIWELLKEFFD 78
Query: 214 AEIKKIGIQNSYFPLFVSEQALTKEKDHIEGFAPEVAWVTKSGNTDLEVPIAIRPTSETV 35 AEIKK+ ++ YFPLFV+E L KEKDHIEGFAPEVAWVTKSG +DLE PIAIRPTSETV Sbjct: 79 AEIKKLKLKPYYFPLFVTENVLQKEKDHIEGFAPEVAWVTKSGKSDLEAPIAIRPTSETV 138
Query: 34 MYPVFAKWIR 5 MYP F+KWIR Sbjct: 139 MYPYFSKWIR 148
>tr|Q0INI9|Q0INI9_ORYSJ Os12g0443700 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os12g0443700 PE=3 SV=1 Length = 515
Score = 223 bits (569), Expect = 4e-57 Identities = 103/130 (79%), Positives = 115/130 (88%) Frame = -3
Query: 394 KEVKKETKLGMTIKKNDNFGDWYSEVVVKSGMIEYYDVSGCYILRPWSYAIWEMLKDFFD 215 KEVKKETKLGM KK+DNFG+WYSEVVV S MIEYYD+SGCYILRPW+ IWE+LK+FFD Sbjct: 24 KEVKKETKLGMAYKKDDNFGEWYSEVVVNSEMIEYYDISGCYILRPWAMEIWELLKEFFD 83
Query: 214 AEIKKIGIQNSYFPLFVSEQALTKEKDHIEGFAPEVAWVTKSGNTDLEVPIAIRPTSETV 35 AEIKK+ ++ YFPLFV+E L KEKDHIEGFAPEVAWVTKSG +DLE PIAIRPTSETV Sbjct: 84 AEIKKLKLKPYYFPLFVTENVLQKEKDHIEGFAPEVAWVTKSGKSDLEAPIAIRPTSETV 143
Query: 34 MYPVFAKWIR 5 MYP F+KWIR Sbjct: 144 MYPYFSKWIR 153
>tr|B8BPH6|B8BPH6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_38226 PE=4 SV=1 Length = 510
Score = 223 bits (569), Expect = 4e-57 Identities = 103/130 (79%), Positives = 115/130 (88%) Frame = -3
Query: 394 KEVKKETKLGMTIKKNDNFGDWYSEVVVKSGMIEYYDVSGCYILRPWSYAIWEMLKDFFD 215 KEVKKETKLGM KK+DNFG+WYSEVVV S MIEYYD+SGCYILRPW+ IWE+LK+FFD Sbjct: 19 KEVKKETKLGMAYKKDDNFGEWYSEVVVNSEMIEYYDISGCYILRPWAMEIWELLKEFFD 78
Query: 214 AEIKKIGIQNSYFPLFVSEQALTKEKDHIEGFAPEVAWVTKSGNTDLEVPIAIRPTSETV 35 AEIKK+ ++ YFPLFV+E L KEKDHIEGFAPEVAWVTKSG +DLE PIAIRPTSETV Sbjct: 79 AEIKKLKLKPYYFPLFVTENVLQKEKDHIEGFAPEVAWVTKSGKSDLEAPIAIRPTSETV 138
Query: 34 MYPVFAKWIR 5 MYP F+KWIR Sbjct: 139 MYPYFSKWIR 148
>tr|B7SDH3|B7SDH3_ORYSJ Aminoacyl-tRNA synthase OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 510
Score = 223 bits (569), Expect = 4e-57 Identities = 103/130 (79%), Positives = 115/130 (88%) Frame = -3
Query: 394 KEVKKETKLGMTIKKNDNFGDWYSEVVVKSGMIEYYDVSGCYILRPWSYAIWEMLKDFFD 215 KEVKKETKLGM KK+DNFG+WYSEVVV S MIEYYD+SGCYILRPW+ IWE+LK+FFD Sbjct: 19 KEVKKETKLGMAYKKDDNFGEWYSEVVVNSEMIEYYDISGCYILRPWAMEIWELLKEFFD 78
Query: 214 AEIKKIGIQNSYFPLFVSEQALTKEKDHIEGFAPEVAWVTKSGNTDLEVPIAIRPTSETV 35 AEIKK+ ++ YFPLFV+E L KEKDHIEGFAPEVAWVTKSG +DLE PIAIRPTSETV Sbjct: 79 AEIKKLKLKPYYFPLFVTENVLQKEKDHIEGFAPEVAWVTKSGKSDLEAPIAIRPTSETV 138
Query: 34 MYPVFAKWIR 5 MYP F+KWIR Sbjct: 139 MYPYFSKWIR 148
>tr|A3CH13|A3CH13_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_034585 PE=3 SV=1 Length = 533
Score = 223 bits (569), Expect = 4e-57 Identities = 103/130 (79%), Positives = 115/130 (88%) Frame = -3
Query: 394 KEVKKETKLGMTIKKNDNFGDWYSEVVVKSGMIEYYDVSGCYILRPWSYAIWEMLKDFFD 215 KEVKKETKLGM KK+DNFG+WYSEVVV S MIEYYD+SGCYILRPW+ IWE+LK+FFD Sbjct: 19 KEVKKETKLGMAYKKDDNFGEWYSEVVVNSEMIEYYDISGCYILRPWAMEIWELLKEFFD 78
Query: 214 AEIKKIGIQNSYFPLFVSEQALTKEKDHIEGFAPEVAWVTKSGNTDLEVPIAIRPTSETV 35 AEIKK+ ++ YFPLFV+E L KEKDHIEGFAPEVAWVTKSG +DLE PIAIRPTSETV Sbjct: 79 AEIKKLKLKPYYFPLFVTENVLQKEKDHIEGFAPEVAWVTKSGKSDLEAPIAIRPTSETV 138
Query: 34 MYPVFAKWIR 5 MYP F+KWIR Sbjct: 139 MYPYFSKWIR 148
>tr|A9PFZ9|A9PFZ9_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 498
Score = 219 bits (559), Expect = 5e-56 Identities = 100/131 (76%), Positives = 115/131 (87%) Frame = -3
Query: 394 KEVKKETKLGMTIKKNDNFGDWYSEVVVKSGMIEYYDVSGCYILRPWSYAIWEMLKDFFD 215 KEVKKET LG++ KK +NFG+WYSEVVV MIEYYD+SGCYILRPW+ +IWE+++ FFD Sbjct: 7 KEVKKETGLGLSFKKEENFGEWYSEVVVNGEMIEYYDISGCYILRPWAMSIWEIMQVFFD 66
Query: 214 AEIKKIGIQNSYFPLFVSEQALTKEKDHIEGFAPEVAWVTKSGNTDLEVPIAIRPTSETV 35 AEIKK+ I+N YFPLFVS L KEKDHIEGFAPEVAWVTKSG +DLE+PIAIRPTSETV Sbjct: 67 AEIKKMKIKNCYFPLFVSSSVLEKEKDHIEGFAPEVAWVTKSGKSDLEIPIAIRPTSETV 126
Query: 34 MYPVFAKWIRG 2 MYP F+KWIRG Sbjct: 127 MYPYFSKWIRG 137
>tr|A7Q0Z4|A7Q0Z4_VITVI Chromosome chr7 scaffold_42, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028238001 PE=3 SV=1 Length = 516
Score = 216 bits (550), Expect = 6e-55 Identities = 99/131 (75%), Positives = 113/131 (86%) Frame = -3
Query: 394 KEVKKETKLGMTIKKNDNFGDWYSEVVVKSGMIEYYDVSGCYILRPWSYAIWEMLKDFFD 215 KEVKKET LG++ KK +NFG+WYSEV V MIEYYD+SGCYILRPW+ A+WE ++ FFD Sbjct: 26 KEVKKETGLGLSYKKEENFGEWYSEVCVNGEMIEYYDISGCYILRPWTMAVWETMQTFFD 85
Query: 214 AEIKKIGIQNSYFPLFVSEQALTKEKDHIEGFAPEVAWVTKSGNTDLEVPIAIRPTSETV 35 AEIKK+ I+N YFPLFVS L KEKDHIEGFAPEVAWVTKSG +DLEVPIAIRPTSETV Sbjct: 86 AEIKKMKIKNCYFPLFVSPGVLQKEKDHIEGFAPEVAWVTKSGQSDLEVPIAIRPTSETV 145
Query: 34 MYPVFAKWIRG 2 MYP ++KWIRG Sbjct: 146 MYPYYSKWIRG 156
>tr|Q9M1R2|Q9M1R2_ARATH Multifunctional aminoacyl-tRNA ligase-like protein OS=Arabidopsis thaliana GN=T17J13.8 PE=2 SV=1 Length = 530
Score = 214 bits (545), Expect = 2e-54 Identities = 99/131 (75%), Positives = 116/131 (88%) Frame = -3
Query: 394 KEVKKETKLGMTIKKNDNFGDWYSEVVVKSGMIEYYDVSGCYILRPWSYAIWEMLKDFFD 215 K+VKKET LG+++KK++NFG+WYSEV K MIEYYD+SGCYILRPWS AIWE+++ FFD Sbjct: 40 KDVKKETGLGLSVKKDENFGEWYSEVC-KQDMIEYYDISGCYILRPWSMAIWEIMQIFFD 98
Query: 214 AEIKKIGIQNSYFPLFVSEQALTKEKDHIEGFAPEVAWVTKSGNTDLEVPIAIRPTSETV 35 AEIKK+ ++N YFPLFVS L KEKDHIEGFAPEVAWVTKSG +DLEVPIAIRPTSETV Sbjct: 99 AEIKKMKVKNCYFPLFVSPGVLEKEKDHIEGFAPEVAWVTKSGKSDLEVPIAIRPTSETV 158
Query: 34 MYPVFAKWIRG 2 MYP ++KWIRG Sbjct: 159 MYPYYSKWIRG 169
|