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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919946
Clone id YMU001_000131_A10
Library
Length 457
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000131_A10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CAAGAAGGGAGAGAAGACAATGACACGCTCTGCTGTTGTGCGTACGCTTGTATTGGTATC
AACTAAAGAAGTGTGCAATGAAGAGCTCTTTCTCAATTATAGACTCAGCAATCATCAAAA
GTGGCCGGCTTGGTATACTCCTATAGATTCCGAGGAAGATAAGCGCCGGTGGCATTAGGA
CAGGGTGTTAGGTATAGAGGAAGAGGCCTAGCAAACCAAAAATGTTGCCCACCTTTTATC
AAGAACTTTAATGTGTATCGTTGAGTGTGGCATGGAACGGTAAAGTATCACCACATTCGG
ACAGTTGAAAGAAGAGTGCTTTTATATCTGTGCCTGATTTTTGGCTCTCATATTTGGAGT
CCTTGTGAAGCTATGAATGTGGTTTCAACTTCCTGAGGTTTTTCAAAAAGTAGAATCACA
CTTGAATTTTTGTGTGAATGCAAGAAAATGATCTTTT
■■Homology search results ■■ -
sp_hit_id Q20249
Definition sp|Q20249|SRE8_CAEEL Serpentine receptor class epsilon-8 OS=Caenorhabditis elegans
Align length 41
Score (bit) 34.3
E-value 0.24
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919946|Adiantum capillus-veneris mRNA, clone:
YMU001_000131_A10.
         (442 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q20249|SRE8_CAEEL Serpentine receptor class epsilon-8 OS=Caen...    34   0.24 
sp|Q57862|Y419_METJA Uncharacterized protein MJ0419 OS=Methanoca...    30   3.4  
sp|Q8GXJ4|GLR34_ARATH Glutamate receptor 3.4 OS=Arabidopsis thal...    30   5.7  

>sp|Q20249|SRE8_CAEEL Serpentine receptor class epsilon-8
           OS=Caenorhabditis elegans GN=sre-8 PE=2 SV=1
          Length = 341

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +2

Query: 308 YICA*FLALIFGVLVKL*MWFQLPEVFQKVESHLNFCVNAR 430
           Y+C  F AL++G+ V + ++  LPE  ++    LN C+  R
Sbjct: 266 YVCFNFFALVYGITVPIILYSALPEWQKETRRLLNLCIGRR 306


>sp|Q57862|Y419_METJA Uncharacterized protein MJ0419
           OS=Methanocaldococcus jannaschii GN=MJ0419 PE=4 SV=1
          Length = 354

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 16/52 (30%), Positives = 30/52 (57%)
 Frame = -1

Query: 205 FGLLGLFLYT*HPVLMPPALIFLGIYRSIPSRPLLMIAESIIEKELFIAHFF 50
           FG+LG+FL   + +      I+LGIY  + +  L+ I   I++ ++ + +FF
Sbjct: 287 FGILGIFLGFFYKLAKDVKGIYLGIYGILFAYTLIGIESGILDIDVILYYFF 338


>sp|Q8GXJ4|GLR34_ARATH Glutamate receptor 3.4 OS=Arabidopsis
           thaliana GN=GLR3.4 PE=2 SV=2
          Length = 959

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 18/51 (35%), Positives = 28/51 (54%)
 Frame = +3

Query: 15  LLLCVRLYWYQLKKCAMKSSFSIIDSAIIKSGRLGILL*IPRKISAGGIRT 167
           +LLCV + W   K+CA +S+FS  +S+   S  L  L   P  ++ G + T
Sbjct: 19  VLLCVSVLWVVPKECACRSNFS-RNSSSSSSSSLRPLRQRPSSVNVGALFT 68
tr_hit_id Q6H7I8
Definition tr|Q6H7I8|Q6H7I8_ORYSJ Os02g0634600 protein OS=Oryza sativa subsp. japonica
Align length 48
Score (bit) 77.4
E-value 3.0e-13
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919946|Adiantum capillus-veneris mRNA, clone:
YMU001_000131_A10.
         (442 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q6H7I8|Q6H7I8_ORYSJ Os02g0634600 protein OS=Oryza sativa subs...    77   3e-13
tr|B8AFS9|B8AFS9_ORYSI Putative uncharacterized protein OS=Oryza...    77   3e-13
tr|A3A9C7|A3A9C7_ORYSJ Putative uncharacterized protein OS=Oryza...    77   3e-13
tr|B6TY37|B6TY37_MAIZE Putative uncharacterized protein OS=Zea m...    77   4e-13
tr|B4FCN4|B4FCN4_MAIZE Putative uncharacterized protein OS=Zea m...    77   4e-13
tr|A7Q7L7|A7Q7L7_VITVI Chromosome undetermined scaffold_60, whol...    74   3e-12
tr|A5BWF9|A5BWF9_VITVI Putative uncharacterized protein OS=Vitis...    74   3e-12
tr|Q9FMY0|Q9FMY0_ARATH Arabidopsis thaliana genomic DNA, chromos...    74   5e-12
tr|Q8RUI8|Q8RUI8_ARATH Putative uncharacterized protein At5g2320...    74   5e-12
tr|Q1EP75|Q1EP75_MUSAC Putative uncharacterized protein OS=Musa ...    73   6e-12
tr|A9S615|A9S615_PHYPA Predicted protein OS=Physcomitrella paten...    67   3e-10
tr|Q00VC3|Q00VC3_OSTTA Homology to unknown gene OS=Ostreococcus ...    62   1e-08
tr|A7SAV8|A7SAV8_NEMVE Predicted protein OS=Nematostella vectens...    62   1e-08
tr|A4S768|A4S768_OSTLU Predicted protein (Fragment) OS=Ostreococ...    62   2e-08
tr|Q8GW76|Q8GW76_ARATH Putative uncharacterized protein At5g0827...    56   1e-06
tr|Q54S91|Q54S91_DICDI Putative uncharacterized protein OS=Dicty...    52   2e-05
tr|B8BX28|B8BX28_THAPS Predicted protein OS=Thalassiosira pseudo...    37   0.37 

>tr|Q6H7I8|Q6H7I8_ORYSJ Os02g0634600 protein OS=Oryza sativa subsp.
           japonica GN=OJ1643_A10.31 PE=2 SV=1
          Length = 405

 Score = 77.4 bits (189), Expect = 3e-13
 Identities = 33/48 (68%), Positives = 40/48 (83%)
 Frame = +2

Query: 14  SAVVRTLVLVSTKEVCNEELFLNYRLSNHQKWPAWYTPIDSEEDKRRW 157
           S V++TLVLVST+ +C+EELFLNYR SN +K P WY P+D EEDKRRW
Sbjct: 357 SPVLKTLVLVSTRSICDEELFLNYRYSNSKKRPEWYIPVDEEEDKRRW 404


>tr|B8AFS9|B8AFS9_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_08190 PE=4 SV=1
          Length = 352

 Score = 77.4 bits (189), Expect = 3e-13
 Identities = 33/48 (68%), Positives = 40/48 (83%)
 Frame = +2

Query: 14  SAVVRTLVLVSTKEVCNEELFLNYRLSNHQKWPAWYTPIDSEEDKRRW 157
           S V++TLVLVST+ +C+EELFLNYR SN +K P WY P+D EEDKRRW
Sbjct: 304 SPVLKTLVLVSTRSICDEELFLNYRYSNSKKRPEWYIPVDEEEDKRRW 351


>tr|A3A9C7|A3A9C7_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_007399 PE=4 SV=1
          Length = 439

 Score = 77.4 bits (189), Expect = 3e-13
 Identities = 33/48 (68%), Positives = 40/48 (83%)
 Frame = +2

Query: 14  SAVVRTLVLVSTKEVCNEELFLNYRLSNHQKWPAWYTPIDSEEDKRRW 157
           S V++TLVLVST+ +C+EELFLNYR SN +K P WY P+D EEDKRRW
Sbjct: 391 SPVLKTLVLVSTRSICDEELFLNYRYSNSKKRPEWYIPVDEEEDKRRW 438


>tr|B6TY37|B6TY37_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 384

 Score = 77.0 bits (188), Expect = 4e-13
 Identities = 32/48 (66%), Positives = 41/48 (85%)
 Frame = +2

Query: 14  SAVVRTLVLVSTKEVCNEELFLNYRLSNHQKWPAWYTPIDSEEDKRRW 157
           S V++TLVLVST+ +C+EELFLNYR SN ++ P WY+P+D EEDKRRW
Sbjct: 336 SLVLKTLVLVSTRSICDEELFLNYRYSNSKRRPEWYSPVDEEEDKRRW 383


>tr|B4FCN4|B4FCN4_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 403

 Score = 77.0 bits (188), Expect = 4e-13
 Identities = 32/48 (66%), Positives = 41/48 (85%)
 Frame = +2

Query: 14  SAVVRTLVLVSTKEVCNEELFLNYRLSNHQKWPAWYTPIDSEEDKRRW 157
           S V++TLVLVST+ +C+EELFLNYR SN ++ P WY+P+D EEDKRRW
Sbjct: 355 SLVLKTLVLVSTRSICDEELFLNYRYSNSKRRPEWYSPVDEEEDKRRW 402


>tr|A7Q7L7|A7Q7L7_VITVI Chromosome undetermined scaffold_60, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00031905001 PE=4 SV=1
          Length = 487

 Score = 74.3 bits (181), Expect = 3e-12
 Identities = 30/46 (65%), Positives = 41/46 (89%)
 Frame = +2

Query: 20  VVRTLVLVSTKEVCNEELFLNYRLSNHQKWPAWYTPIDSEEDKRRW 157
           V++TLVLV+T+ +C+EE+ LNYRLSN ++ PAWYTP+D EED+RRW
Sbjct: 441 VLKTLVLVATRALCDEEVLLNYRLSNSKRRPAWYTPVDEEEDRRRW 486


>tr|A5BWF9|A5BWF9_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_003407 PE=4 SV=1
          Length = 345

 Score = 74.3 bits (181), Expect = 3e-12
 Identities = 30/46 (65%), Positives = 41/46 (89%)
 Frame = +2

Query: 20  VVRTLVLVSTKEVCNEELFLNYRLSNHQKWPAWYTPIDSEEDKRRW 157
           V++TLVLV+T+ +C+EE+ LNYRLSN ++ PAWYTP+D EED+RRW
Sbjct: 299 VLKTLVLVATRALCDEEVLLNYRLSNSKRRPAWYTPVDEEEDRRRW 344


>tr|Q9FMY0|Q9FMY0_ARATH Arabidopsis thaliana genomic DNA, chromosome
           5, P1 clone:MKD15 OS=Arabidopsis thaliana PE=4 SV=1
          Length = 437

 Score = 73.6 bits (179), Expect = 5e-12
 Identities = 30/46 (65%), Positives = 40/46 (86%)
 Frame = +2

Query: 20  VVRTLVLVSTKEVCNEELFLNYRLSNHQKWPAWYTPIDSEEDKRRW 157
           V++TLVLV+T+ +CNEEL LNYRLSN ++ P WYTP++ EED+RRW
Sbjct: 391 VLKTLVLVATRSLCNEELLLNYRLSNSKRRPDWYTPVNEEEDRRRW 436


>tr|Q8RUI8|Q8RUI8_ARATH Putative uncharacterized protein At5g23200
           OS=Arabidopsis thaliana GN=At5g23200 PE=2 SV=1
          Length = 399

 Score = 73.6 bits (179), Expect = 5e-12
 Identities = 30/46 (65%), Positives = 40/46 (86%)
 Frame = +2

Query: 20  VVRTLVLVSTKEVCNEELFLNYRLSNHQKWPAWYTPIDSEEDKRRW 157
           V++TLVLV+T+ +CNEEL LNYRLSN ++ P WYTP++ EED+RRW
Sbjct: 353 VLKTLVLVATRSLCNEELLLNYRLSNSKRRPDWYTPVNEEEDRRRW 398


>tr|Q1EP75|Q1EP75_MUSAC Putative uncharacterized protein OS=Musa
           acuminata GN=MA4_54B05.28 PE=4 SV=1
          Length = 592

 Score = 73.2 bits (178), Expect = 6e-12
 Identities = 31/45 (68%), Positives = 40/45 (88%)
 Frame = +2

Query: 14  SAVVRTLVLVSTKEVCNEELFLNYRLSNHQKWPAWYTPIDSEEDK 148
           S V++TLVLV+T+ +CNEE+FLNYRLSN ++ PAWYTP+D EEDK
Sbjct: 524 SPVLKTLVLVATRALCNEEVFLNYRLSNQKRRPAWYTPVDEEEDK 568