BP919952
Clone id YMU001_000131_B06
Library
Length 424
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000131_B06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GCGATGTTCTTCGCGAGCTCGCCATCGATGAGGATGACGGCTTCTCCCTGGCGATTTGTC
CCCTCCACCCTCCCACCAGGTATCCCTTTCTCCATCCACTCCATCTCTCTCCATTATGAG
TAGAGGAAGTATATAACATCAGTCATAGCATCATCACCACCATGCAAGTGAAGCAAGTGG
TGAGGGTGTGTATCGTGAACTGGGGACAGTATTCAAGCCAAATATTGATATCATAAAATC
ACATAGGCATGTGTGTCAATCAAATGTAAATTACTGTTTTCAAGCTCTATATTTTGTAGA
CCTAATTGTAATATATGGGCTTAAGATGTGGCCTTCATACTTTACCACTGGGCCTAACTA
ACTTATGGTCATCTCCAACCCTTTGTAGTTGTGATCATCCTTCACTTCAACAATCGAAAT
CAAG
■■Homology search results ■■ -
sp_hit_id P61710
Definition sp|P61710|SYA_METMP Alanyl-tRNA synthetase OS=Methanococcus maripaludis
Align length 27
Score (bit) 32.0
E-value 1.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919952|Adiantum capillus-veneris mRNA, clone:
YMU001_000131_B06.
(424 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P61710|SYA_METMP Alanyl-tRNA synthetase OS=Methanococcus mari... 32 1.0
sp|A9A6Q2|SYA_METM6 Alanyl-tRNA synthetase OS=Methanococcus mari... 32 1.0
sp|A6VJ32|SYA_METM7 Alanyl-tRNA synthetase OS=Methanococcus mari... 31 1.8
sp|Q92089|TDT_ONCMY DNA nucleotidylexotransferase OS=Oncorhynchu... 31 2.3
sp|A6US09|SYA_METVS Alanyl-tRNA synthetase OS=Methanococcus vann... 30 3.0
sp|Q2KIC2|ETV1_BOVIN ETS translocation variant 1 OS=Bos taurus G... 30 5.2

>sp|P61710|SYA_METMP Alanyl-tRNA synthetase OS=Methanococcus
maripaludis GN=alaS PE=3 SV=1
Length = 892

Score = 32.0 bits (71), Expect = 1.0
Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 4/27 (14%)
Frame = -2

Query: 117 IMERDGVDGER----DTWWEGGGDKSP 49
+M+R G+DG+ ++WWEGGG+ P
Sbjct: 173 LMQRLGIDGKTITFIESWWEGGGNAGP 199


>sp|A9A6Q2|SYA_METM6 Alanyl-tRNA synthetase OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=alaS PE=3
SV=1
Length = 892

Score = 32.0 bits (71), Expect = 1.0
Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 4/27 (14%)
Frame = -2

Query: 117 IMERDGVDGER----DTWWEGGGDKSP 49
+M+R G+DG+ ++WWEGGG+ P
Sbjct: 173 LMQRLGIDGKTITFIESWWEGGGNAGP 199


>sp|A6VJ32|SYA_METM7 Alanyl-tRNA synthetase OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=alaS PE=3
SV=1
Length = 892

Score = 31.2 bits (69), Expect = 1.8
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 4/27 (14%)
Frame = -2

Query: 117 IMERDGVDGER----DTWWEGGGDKSP 49
+M R G+DG+ ++WWEGGG+ P
Sbjct: 173 LMNRLGIDGKTITFIESWWEGGGNAGP 199


>sp|Q92089|TDT_ONCMY DNA nucleotidylexotransferase OS=Oncorhynchus
mykiss GN=dntt PE=2 SV=1
Length = 501

Score = 30.8 bits (68), Expect = 2.3
Identities = 23/76 (30%), Positives = 36/76 (47%)
Frame = -2

Query: 243 CDFMISIFGLNTVPSSRYTPSPLASLAWW**CYD*CYILPLLIMERDGVDGERDTWWEGG 64
CD+ S F ++ +PS R+ C+ C++ +L +E+ V+GER G
Sbjct: 367 CDYQGSTFDVSKLPSCRFEDMD---------CFQKCFL--ILRLEQGQVEGER------G 409

Query: 63 GDKSPGRSRHPHRWRA 16
+ PG SR WRA
Sbjct: 410 LQRDPGDSR---GWRA 422


>sp|A6US09|SYA_METVS Alanyl-tRNA synthetase OS=Methanococcus
vannielii (strain SB / ATCC 35089 / DSM 1224) GN=alaS
PE=3 SV=1
Length = 892

Score = 30.4 bits (67), Expect = 3.0
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 4/27 (14%)
Frame = -2

Query: 117 IMERDGVDGER----DTWWEGGGDKSP 49
+M++ G+DG ++WWEGGG+ P
Sbjct: 173 LMQKLGIDGHTITFIESWWEGGGNAGP 199


>sp|Q2KIC2|ETV1_BOVIN ETS translocation variant 1 OS=Bos taurus
GN=ETV1 PE=2 SV=1
Length = 477

Score = 29.6 bits (65), Expect = 5.2
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1

Query: 16 SSPSMRMTASPWRFVPSTLPPGIPFSIHSISLHYE*RKYITSVIASSPP 162
+SP+ T+ P R P+ LPP P S + + R+ ++ S PP
Sbjct: 151 ASPNSAHTSKPDRAFPAHLPPSQPIQDSSYPMDHRFRRQLSEPCNSFPP 199


tr_hit_id Q8IRS8
Definition tr|Q8IRS8|Q8IRS8_DROME CG32790 OS=Drosophila melanogaster
Align length 37
Score (bit) 35.8
E-value 1.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919952|Adiantum capillus-veneris mRNA, clone:
YMU001_000131_B06.
(424 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q8IRS8|Q8IRS8_DROME CG32790 OS=Drosophila melanogaster GN=CG3... 36 1.1
tr|B4YW03|B4YW03_DROME Putative uncharacterized protein (Fragmen... 36 1.1
tr|B4YW02|B4YW02_DROME Putative uncharacterized protein (Fragmen... 36 1.1
tr|B4YW01|B4YW01_DROME Putative uncharacterized protein (Fragmen... 36 1.1
tr|B4R492|B4R492_DROSI GD16667 OS=Drosophila simulans GN=GD16667... 36 1.1
tr|B4Q0G2|B4Q0G2_DROYA GE16324 OS=Drosophila yakuba GN=GE16324 P... 36 1.1
tr|B4I132|B4I132_DROSE GM12318 OS=Drosophila sechellia GN=GM1231... 36 1.1
tr|B3NST7|B3NST7_DROER GG18687 OS=Drosophila erecta GN=GG18687 P... 36 1.1
tr|A9YI48|A9YI48_DROME CG32790-PA (Putative uncharacterized prot... 36 1.1
tr|A9YI47|A9YI47_DROSI CG32790-PA (Fragment) OS=Drosophila simul... 36 1.1
tr|Q6CSK0|Q6CSK0_KLULA KLLA0D00396p OS=Kluyveromyces lactis GN=K... 34 3.1
tr|Q6GQB8|Q6GQB8_XENLA LOC398358 protein OS=Xenopus laevis GN=et... 33 5.3
tr|O93322|O93322_XENLA Ets-related transcription factor XER81 (F... 33 5.3
tr|Q2VF29|Q2VF29_9RETR Envelope protein OS=Atlantic salmon swim ... 33 7.0
tr|B8PJS7|B8PJS7_9APHY Putative uncharacterized protein OS=Posti... 33 7.0
tr|Q6P4Z1|Q6P4Z1_XENTR Ets variant gene 1 OS=Xenopus tropicalis ... 33 9.1

>tr|Q8IRS8|Q8IRS8_DROME CG32790 OS=Drosophila melanogaster
GN=CG32790 PE=2 SV=1
Length = 432

Score = 35.8 bits (81), Expect = 1.1
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2

Query: 164 ASEASGEGVYRELGTVFKPNIDIIKSHRHVCQSNVNY 274
+S ASG+GVY + + FKP IDIIK +V ++ +Y
Sbjct: 231 SSSASGQGVYTQAASAFKPPIDIIK-RNYVAAAHAHY 266


>tr|B4YW03|B4YW03_DROME Putative uncharacterized protein (Fragment)
OS=Drosophila melanogaster GN=CG32790 PE=4 SV=1
Length = 211

Score = 35.8 bits (81), Expect = 1.1
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2

Query: 164 ASEASGEGVYRELGTVFKPNIDIIKSHRHVCQSNVNY 274
+S ASG+GVY + + FKP IDIIK +V ++ +Y
Sbjct: 170 SSSASGQGVYTQAASAFKPPIDIIK-RNYVAAAHAHY 205


>tr|B4YW02|B4YW02_DROME Putative uncharacterized protein (Fragment)
OS=Drosophila melanogaster GN=CG32790 PE=4 SV=1
Length = 211

Score = 35.8 bits (81), Expect = 1.1
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2

Query: 164 ASEASGEGVYRELGTVFKPNIDIIKSHRHVCQSNVNY 274
+S ASG+GVY + + FKP IDIIK +V ++ +Y
Sbjct: 170 SSSASGQGVYTQAASAFKPPIDIIK-RNYVAAAHAHY 205


>tr|B4YW01|B4YW01_DROME Putative uncharacterized protein (Fragment)
OS=Drosophila melanogaster GN=CG32790 PE=4 SV=1
Length = 211

Score = 35.8 bits (81), Expect = 1.1
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2

Query: 164 ASEASGEGVYRELGTVFKPNIDIIKSHRHVCQSNVNY 274
+S ASG+GVY + + FKP IDIIK +V ++ +Y
Sbjct: 170 SSSASGQGVYTQAASAFKPPIDIIK-RNYVAAAHAHY 205


>tr|B4R492|B4R492_DROSI GD16667 OS=Drosophila simulans GN=GD16667
PE=4 SV=1
Length = 1054

Score = 35.8 bits (81), Expect = 1.1
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2

Query: 164 ASEASGEGVYRELGTVFKPNIDIIKSHRHVCQSNVNY 274
+S ASG+GVY + + FKP IDIIK +V ++ +Y
Sbjct: 139 SSSASGQGVYAQAASAFKPPIDIIK-RNYVAAAHAHY 174


>tr|B4Q0G2|B4Q0G2_DROYA GE16324 OS=Drosophila yakuba GN=GE16324 PE=4
SV=1
Length = 416

Score = 35.8 bits (81), Expect = 1.1
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2

Query: 164 ASEASGEGVYRELGTVFKPNIDIIKSHRHVCQSNVNY 274
+S ASG+GVY + + FKP IDIIK +V ++ +Y
Sbjct: 218 SSSASGQGVYAQAASAFKPPIDIIK-RNYVAAAHAHY 253


>tr|B4I132|B4I132_DROSE GM12318 OS=Drosophila sechellia GN=GM12318
PE=4 SV=1
Length = 427

Score = 35.8 bits (81), Expect = 1.1
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2

Query: 164 ASEASGEGVYRELGTVFKPNIDIIKSHRHVCQSNVNY 274
+S ASG+GVY + + FKP IDIIK +V ++ +Y
Sbjct: 228 SSSASGQGVYAQAASAFKPPIDIIK-RNYVAAAHAHY 263


>tr|B3NST7|B3NST7_DROER GG18687 OS=Drosophila erecta GN=GG18687 PE=4
SV=1
Length = 418

Score = 35.8 bits (81), Expect = 1.1
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2

Query: 164 ASEASGEGVYRELGTVFKPNIDIIKSHRHVCQSNVNY 274
+S ASG+GVY + + FKP IDIIK +V ++ +Y
Sbjct: 221 SSSASGQGVYAQAASAFKPPIDIIK-RNYVAAAHAHY 256


>tr|A9YI48|A9YI48_DROME CG32790-PA (Putative uncharacterized
protein) (Fragment) OS=Drosophila melanogaster
GN=CG32790 PE=4 SV=1
Length = 211

Score = 35.8 bits (81), Expect = 1.1
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2

Query: 164 ASEASGEGVYRELGTVFKPNIDIIKSHRHVCQSNVNY 274
+S ASG+GVY + + FKP IDIIK +V ++ +Y
Sbjct: 170 SSSASGQGVYTQAASAFKPPIDIIK-RNYVAAAHAHY 205


>tr|A9YI47|A9YI47_DROSI CG32790-PA (Fragment) OS=Drosophila simulans
PE=4 SV=1
Length = 211

Score = 35.8 bits (81), Expect = 1.1
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2

Query: 164 ASEASGEGVYRELGTVFKPNIDIIKSHRHVCQSNVNY 274
+S ASG+GVY + + FKP IDIIK +V ++ +Y
Sbjct: 170 SSSASGQGVYAQAASAFKPPIDIIK-RNYVAAAHAHY 205