BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919955|Adiantum capillus-veneris mRNA, clone:
YMU001_000131_B09.
         (432 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q3IJ28|SYGB_PSEHT Glycyl-tRNA synthetase beta subunit OS=Pseu...    29   7.3  
sp|Q13255|GRM1_HUMAN Metabotropic glutamate receptor 1 OS=Homo s...    29   7.3  
sp|A5GV21|RL21_SYNR3 50S ribosomal protein L21 OS=Synechococcus ...    29   9.3  

>sp|Q3IJ28|SYGB_PSEHT Glycyl-tRNA synthetase beta subunit
           OS=Pseudoalteromonas haloplanktis (strain TAC 125)
           GN=glyS PE=3 SV=1
          Length = 689

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = -1

Query: 411 MQYSRSEGERY*RQEVEMERGVPKFLGDWQPENLIARQVPLNGPID 274
           M Y+R +GE       + E+ +P+F GD  P NLI+  V +    D
Sbjct: 413 MHYARFDGEAEDVALAQNEQYMPRFAGDSLPTNLISCAVAIADKFD 458


>sp|Q13255|GRM1_HUMAN Metabotropic glutamate receptor 1 OS=Homo
           sapiens GN=GRM1 PE=1 SV=2
          Length = 1194

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -1

Query: 270 RKPSHLVSNPHFDRVQTNKDFLYRQYLE 187
           R P HL+ NP+F R+ T  + L   Y++
Sbjct: 379 RLPGHLLENPNFKRICTGNESLEENYVQ 406


>sp|A5GV21|RL21_SYNR3 50S ribosomal protein L21 OS=Synechococcus sp.
           (strain RCC307) GN=rplU PE=3 SV=1
          Length = 136

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -2

Query: 98  YVS*AVDNLNIYAHKRLRRIVVYKL 24
           YV  AV NL + AH+R  +++VYK+
Sbjct: 80  YVKDAVVNLKVLAHRRGPKVIVYKM 104

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919955|Adiantum capillus-veneris mRNA, clone:
YMU001_000131_B09.
         (432 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q66SR6|Q66SR6_9SAUR ATP synthase subunit a OS=Bipes tridactyl...    33   9.3  

>tr|Q66SR6|Q66SR6_9SAUR ATP synthase subunit a OS=Bipes tridactylus
           GN=atp6 PE=3 SV=1
          Length = 226

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 31/85 (36%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
 Frame = +1

Query: 172 LLCFPLQILPV*KVLVCLNSVEVWITNKMRGFSNIYGTIQWHLSGNEIFR-LPVPQELW- 345
           +L  PL I+ V   +  L S    I N+MR  SN   T        +IFR LP     W 
Sbjct: 14  ILGLPLIIMAVLAPIPLLPSTNRLIQNRMRTLSNQTMTAM----AQQIFRPLPSMAHKWA 69

Query: 346 --YTSLHF-----NLLSLVPFTFRP 399
             Y +L F     NLL L+P+TF P
Sbjct: 70  SPYIALLFMLLTMNLLGLLPYTFTP 94