BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919967|Adiantum capillus-veneris mRNA, clone:
YMU001_000131_D04.
         (378 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A8FSM5|Y1237_SHESH UPF0301 protein Ssed_1237 OS=Shewanella se...    30   4.8  
sp|Q8FLM0|SYL_COREF Leucyl-tRNA synthetase OS=Corynebacterium ef...    30   4.8  
sp|Q6AEU4|GLGB_LEIXX 1,4-alpha-glucan-branching enzyme OS=Leifso...    30   4.8  
sp|Q62770|UN13C_RAT Protein unc-13 homolog C OS=Rattus norvegicu...    29   6.3  
sp|Q8K0T7|UN13C_MOUSE Protein unc-13 homolog C OS=Mus musculus G...    29   8.2  
sp|A8LX93|SYL_SALAI Leucyl-tRNA synthetase OS=Salinispora arenic...    29   8.2  
sp|Q54CR9|DNLI4_DICDI DNA ligase 4 OS=Dictyostelium discoideum G...    29   8.2  

>sp|A8FSM5|Y1237_SHESH UPF0301 protein Ssed_1237 OS=Shewanella
           sediminis (strain HAW-EB3) GN=Ssed_1237 PE=3 SV=1
          Length = 186

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = -1

Query: 342 GLKDRDDVGGEVNELLHMMVSEATHTKAWRVGKKTQGNGETTKERALIMHFP 187
           G+     +G EVNELL  M  +        +G K    G  T ER  ++H P
Sbjct: 37  GIMINRPIGIEVNELLLQMQLKEEPELITSLGSKVLIGGPVTPERGFVLHTP 88


>sp|Q8FLM0|SYL_COREF Leucyl-tRNA synthetase OS=Corynebacterium
           efficiens GN=leuS PE=3 SV=1
          Length = 957

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 20/62 (32%), Positives = 33/62 (53%)
 Frame = -1

Query: 306 NELLHMMVSEATHTKAWRVGKKTQGNGETTKERALIMHFPSMEAKDVLKKCPTLKKTGIF 127
           +EL+ ++VS  T +      + T  NG+ T   A+  +  S+ AK  L++     KTG+F
Sbjct: 339 HELVDVLVSRGTGSYDGVDPRWT--NGQATPAEAVAAYRASIAAKSDLERQENKDKTGVF 396

Query: 126 LG 121
           LG
Sbjct: 397 LG 398


>sp|Q6AEU4|GLGB_LEIXX 1,4-alpha-glucan-branching enzyme OS=Leifsonia
           xyli subsp. xyli GN=glgB PE=3 SV=1
          Length = 733

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 18/71 (25%), Positives = 27/71 (38%), Gaps = 1/71 (1%)
 Frame = -3

Query: 223 DYKGESSNHAFPIHGGKRRLEEVPYIKENRHIPW-R*PHTLTTCSYDKSYARDNGSLREG 47
           DY  ++      IHGG+  LE + +++E     + R P T+       SY         G
Sbjct: 422 DYSRDADGWEPNIHGGRENLEAIAFLQEVTATAYKRNPGTIVIAEESTSYPGVTAPTSSG 481

Query: 46  ESGLNTAWMSG 14
             G    W  G
Sbjct: 482 GLGFGLKWNMG 492


>sp|Q62770|UN13C_RAT Protein unc-13 homolog C OS=Rattus norvegicus
           GN=Unc13c PE=1 SV=3
          Length = 2204

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
 Frame = -1

Query: 261 AWRVGKKTQGNGETTKERALIMHFPSMEAKD-VLKKCPTLKKTGIFLGDDLI 109
           A R+G+  Q +    K R ++++F + + +D VLKK   LK TGI +  D++
Sbjct: 357 AQRIGQ--QRDCPNAKPRPILVYFETPQQRDSVLKKSYKLKGTGIAISTDIL 406


>sp|Q8K0T7|UN13C_MOUSE Protein unc-13 homolog C OS=Mus musculus
           GN=Unc13c PE=2 SV=3
          Length = 2210

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
 Frame = -1

Query: 261 AWRVGKKTQGNGETTKERALIMHFPSMEAKD-VLKKCPTLKKTGIFLGDDLI 109
           A R+G+  Q +    K R ++++F + + +D VLKK   LK TGI +  D++
Sbjct: 357 AQRIGQ--QRDCPNAKPRPILVYFETPQQRDSVLKKSYKLKGTGIGISTDIL 406


>sp|A8LX93|SYL_SALAI Leucyl-tRNA synthetase OS=Salinispora arenicola
           (strain CNS-205) GN=leuS PE=3 SV=1
          Length = 952

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = -1

Query: 294 HMMVSEATHTKAWRVGKKTQGNGETTKERALIMHFPSMEAK--DVLKKCPTLKKTGIFLG 121
           H +V +   T AW  G +    G     RA +  +  + A   D+ ++  T +KTG+F+G
Sbjct: 342 HALVDDLVPT-AWPSGTRDAWTGGQASPRAAVAGYRKVAAAKTDMERQAETKEKTGVFIG 400


>sp|Q54CR9|DNLI4_DICDI DNA ligase 4 OS=Dictyostelium discoideum
           GN=lig4 PE=3 SV=1
          Length = 1088

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 11/52 (21%), Positives = 29/52 (55%)
 Frame = -1

Query: 201 IMHFPSMEAKDVLKKCPTLKKTGIFLGDDLILSQLAHMIKVMPEIMVA*EKG 46
           +M+ P M+   +LK+C T+K     + +   ++ ++ +I ++   ++  E+G
Sbjct: 524 VMNLPLMQRLMLLKRCVTIKSKQFEISEQTTVNSISQIISLLESAIINREEG 575

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919967|Adiantum capillus-veneris mRNA, clone:
YMU001_000131_D04.
         (378 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7HQI2|A7HQI2_PARL1 1,4-alpha-glucan branching enzyme OS=Parv...    33   7.0  
tr|B6B6H1|B6B6H1_9RHOB NADH:ubiquinone oxidoreductase 17.2 kd su...    33   7.0  

>tr|A7HQI2|A7HQI2_PARL1 1,4-alpha-glucan branching enzyme
           OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023
           / NCIMB 13966) GN=Plav_0542 PE=4 SV=1
          Length = 732

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
 Frame = -3

Query: 223 DYKGESSNHAFPIHGGKRRLEEVPYIKE-NRHIPWR*PHTLTTCSYDKSYARDNGSLREG 47
           DY  ++      IHGG+  LE V ++K  N  I  R P  +T      ++   +  L+ G
Sbjct: 417 DYSRKAGEWVPNIHGGRENLESVDFLKRLNAIIAERCPGAVTIAEESTAWPGVSAPLKSG 476

Query: 46  ESGLNTAWMSG 14
             G +  W  G
Sbjct: 477 GLGFSYKWNMG 487


>tr|B6B6H1|B6B6H1_9RHOB NADH:ubiquinone oxidoreductase 17.2 kd
           subunit OS=Rhodobacterales bacterium Y4I GN=RBY4I_2413
           PE=4 SV=1
          Length = 128

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
 Frame = -3

Query: 244 EDTRKWGDYKGE--SSNHAFPIHGGKRR-LEEVPYIKENRHIPWR*PHTLTTCSYDKSYA 74
           +D+++W  + GE  +S  +   HG   R  +EVP  K  +H PW  PH         +YA
Sbjct: 46  DDSKRWVMFNGEVEASRISPDWHGWLHRTFDEVPSEKPLKHKPWEKPHQENLTGTMMAYA 105

Query: 73  RDNGSLREG 47
              GS+R G
Sbjct: 106 -PAGSIRAG 113