BP919971
Clone id YMU001_000131_D09
Library
Length 312
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000131_D09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTTGGCTCGATCTTAGAGCAAAACCCGCTCATCAAATAATCTAGGATTTCACTCCTTGGA
TTCCTCAAGCACAGGCCGTAGTCGTTGCTTGTTCCTTCCCTCGTAGAGAGAGTGTTCATT
CACTTGTGCGAAAAGCACTACCATATCTTCTCTGACCGGGTAGGGGGTGTTGGTTCATAA
GCTTAGTGAAAGCTTTTGCTTGGTCAAAAGCTCGGAATGGTTCCTTCCTTTCTGCCGTCT
TACCCTGCAATAGCACGTAATTTGTTTGTGAACTACCGGATACGAGATCAATAGTTGACC
TTCCGGATGATT
■■Homology search results ■■ -
sp_hit_id P20471
Definition sp|P20471|NDVB_RHIME Protein ndvB OS=Rhizobium meliloti
Align length 69
Score (bit) 30.0
E-value 3.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919971|Adiantum capillus-veneris mRNA, clone:
YMU001_000131_D09.
(312 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P20471|NDVB_RHIME Protein ndvB OS=Rhizobium meliloti GN=ndvB ... 30 3.7

>sp|P20471|NDVB_RHIME Protein ndvB OS=Rhizobium meliloti GN=ndvB
PE=4 SV=2
Length = 2832

Score = 30.0 bits (66), Expect = 3.7
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +3

Query: 12 LRAKPAHQII*DFTPWIPQ--AQAVVVACSFPRRESVHSLVRKALPYLL*PGRGCWFISL 185
L AKP+ + +F IP+ VVV C +R+ V LVR + L RG + +L
Sbjct: 467 LFAKPSRLVGYEFLDGIPEDARTLVVVPCLIAKRDHVDELVRNLEVHYLANPRGEIYFAL 526

Query: 186 VKAFAWSKA 212
+ +A SK+
Sbjct: 527 LSDWADSKS 535


tr_hit_id A5GAJ1
Definition tr|A5GAJ1|A5GAJ1_GEOUR Aldehyde ferredoxin oxidoreductase OS=Geobacter uraniireducens (strain Rf4)
Align length 56
Score (bit) 35.4
E-value 1.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919971|Adiantum capillus-veneris mRNA, clone:
YMU001_000131_D09.
(312 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5GAJ1|A5GAJ1_GEOUR Aldehyde ferredoxin oxidoreductase OS=Geo... 35 1.4

>tr|A5GAJ1|A5GAJ1_GEOUR Aldehyde ferredoxin oxidoreductase
OS=Geobacter uraniireducens (strain Rf4) GN=Gura_1195
PE=4 SV=1
Length = 576

Score = 35.4 bits (80), Expect = 1.4
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = -3

Query: 310 SSGRSTIDLVSGSSQTNYVLLQ---GKTAERKEPFRAFDQAKAFTKLMNQHPLPGQ 152
S GR + V GS + YV + G E K+P + + A+AF K + +HP+ G+
Sbjct: 183 SHGRGGLGAVMGSKKVKYVTIDDSGGPGVEVKDPEKFKNAARAFAKAILEHPVSGE 238