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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919982
Clone id YMU001_000131_E10
Library
Length 556
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000131_E10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTTTTTTTTTTTTTTTTAGCGAAAAAAGAGAAATAAGTCCATTCAAAGGCAAGGACCTCA
AAAAGAAAATTCAACACAGAGTATGCTGGACATTTTCTTCAAAAAGTGTGTCCATATACT
CTAAATGCCTTATGGACAAAACATGAAGCCAACAGCAGCCACAACGACAGCGTATCAAGC
TTTGAAAGGGCGATTTGCCTCCCAAATTATTGTGATCAATGTCTCCCAAGGAGTAACTCA
GATGAGGTTACTGGCCAGGCTTCTGGACGAGGAAGCCAGCAACCTGGACCTGGCGCTTGG
CATCGAAGCCAAGCACCCGGATGAAGGCCTTGGGATACTCCTTGGCGCACTCAGTAATCT
CTCGCAGAACGGTGGCAGAGTCGGTGCAGCCAAACATGGGCAGCTTCCACATCACCCAGT
ACCTCCCATCGTAGTACCCGCTCCCGTGGAAGTGCTCCCGGTACACGCTCCCAATGTTGT
CGAACTCGATGCAGGCGGTAAAGTTCTGTCGCACCATGTAGTCCACCTGCTTTGCTATCT
GCTCGCTACTCAGCTG
■■Homology search results ■■ -
sp_hit_id Q96542
Definition sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Betula verrucosa
Align length 100
Score (bit) 142.0
E-value 1.0e-33
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919982|Adiantum capillus-veneris mRNA, clone:
YMU001_000131_E10.
         (522 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   142   1e-33
sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   141   2e-33
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   137   3e-32
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   136   5e-32
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   135   9e-32
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   134   2e-31
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   134   2e-31
sp|Q39743|RBS1_FLAPR Ribulose bisphosphate carboxylase small cha...   134   3e-31
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   134   3e-31
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   133   4e-31
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   133   4e-31
sp|P07089|RBS_FLATR Ribulose bisphosphate carboxylase small chai...   133   6e-31
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   133   6e-31
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai...   132   8e-31
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   132   8e-31
sp|Q39745|RBS3_FLAPR Ribulose bisphosphate carboxylase small cha...   132   8e-31
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   132   8e-31
sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha...   132   1e-30
sp|Q39744|RBS2_FLAPR Ribulose bisphosphate carboxylase small cha...   132   1e-30
sp|Q39749|RBS7_FLAPR Ribulose bisphosphate carboxylase small cha...   132   1e-30
sp|Q39747|RBS5_FLAPR Ribulose bisphosphate carboxylase small cha...   132   1e-30
sp|P07398|RBS3_WHEAT Ribulose bisphosphate carboxylase small cha...   132   1e-30
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...   131   2e-30
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...   131   2e-30
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   130   3e-30
sp|Q39748|RBS6_FLAPR Ribulose bisphosphate carboxylase small cha...   130   3e-30
sp|P08474|RBS_CUCSA Ribulose bisphosphate carboxylase small chai...   130   4e-30
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   130   4e-30
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   130   4e-30
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   130   4e-30

>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  142 bits (358), Expect = 1e-33
 Identities = 63/100 (63%), Positives = 77/100 (77%), Gaps = 1/100 (1%)
 Frame = -1

Query: 519 LSSEQIAKQVDYMVRQNFTACIEFD-NIGSVYREHFHGSGYYDGRYWVMWKLPMFGCTDS 343
           LSSEQ+AK+VDY++R+N   C+EF+   G VYREH    GYYDGRYW MWKLPMFGC DS
Sbjct: 80  LSSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCNDS 139

Query: 342 ATVLREITECAKEYPKAFIRVLGFDAKRQVQVAGFLVQKP 223
           + VL+E+ EC K YP AFIR++GFD KRQVQ+  F+  KP
Sbjct: 140 SQVLKELEECKKAYPSAFIRIIGFDNKRQVQIISFIAYKP 179


>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  141 bits (355), Expect = 2e-33
 Identities = 62/100 (62%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
 Frame = -1

Query: 519 LSSEQIAKQVDYMVRQNFTACIEFD-NIGSVYREHFHGSGYYDGRYWVMWKLPMFGCTDS 343
           LS E ++K++DY++R  +  C+EF+   G VYREH H  GYYDGRYW MWKLPMFGCTDS
Sbjct: 78  LSDEALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDS 137

Query: 342 ATVLREITECAKEYPKAFIRVLGFDAKRQVQVAGFLVQKP 223
           A V++E+ EC KEYP AFIRV+GFD  RQVQ   F+V KP
Sbjct: 138 AQVMKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKP 177


>sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small chain
           2, chloroplastic OS=Spinacia oleracea GN=RBCS2 PE=1 SV=1
          Length = 180

 Score =  137 bits (345), Expect = 3e-32
 Identities = 59/100 (59%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
 Frame = -1

Query: 519 LSSEQIAKQVDYMVRQNFTACIEFD-NIGSVYREHFHGSGYYDGRYWVMWKLPMFGCTDS 343
           L+++Q+A+QVDY++   +  C+EF+ + G VYREH +  GYYDGRYW MWKLPMFGCTD 
Sbjct: 78  LTTDQLARQVDYLLNNKWVPCLEFETDHGFVYREHHNSPGYYDGRYWTMWKLPMFGCTDP 137

Query: 342 ATVLREITECAKEYPKAFIRVLGFDAKRQVQVAGFLVQKP 223
           A VL E+ EC KEYP AFIR++GFD+ RQVQ   F+  KP
Sbjct: 138 AQVLNELEECKKEYPNAFIRIIGFDSNRQVQCVSFIAYKP 177


>sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small chain
           1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A
           PE=1 SV=2
          Length = 180

 Score =  136 bits (343), Expect = 5e-32
 Identities = 59/100 (59%), Positives = 75/100 (75%), Gaps = 1/100 (1%)
 Frame = -1

Query: 519 LSSEQIAKQVDYMVRQNFTACIEFD-NIGSVYREHFHGSGYYDGRYWVMWKLPMFGCTDS 343
           L+  ++AK+VDY++R  +  C+EF+   G VYREH +  GYYDGRYW MWKLP+FGCTDS
Sbjct: 76  LTDSELAKEVDYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDGRYWTMWKLPLFGCTDS 135

Query: 342 ATVLREITECAKEYPKAFIRVLGFDAKRQVQVAGFLVQKP 223
           A VL+E+ EC KEYP AFIR++GFD  RQVQ   F+  KP
Sbjct: 136 AQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFIAYKP 175


>sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1
          Length = 171

 Score =  135 bits (341), Expect = 9e-32
 Identities = 58/99 (58%), Positives = 76/99 (76%)
 Frame = -1

Query: 519 LSSEQIAKQVDYMVRQNFTACIEFDNIGSVYREHFHGSGYYDGRYWVMWKLPMFGCTDSA 340
           L+ EQ+ K+V+Y++R  +  C+EFD  GS+ R++    GYYDGRYWVMWKLPMFGCT+++
Sbjct: 72  LTEEQLVKEVEYLLRNKWVPCLEFDLEGSISRKYNRSPGYYDGRYWVMWKLPMFGCTEAS 131

Query: 339 TVLREITECAKEYPKAFIRVLGFDAKRQVQVAGFLVQKP 223
            V+ E+ ECAK YPKAFIRV+GFD  RQVQ   F+V KP
Sbjct: 132 QVINEVRECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 170


>sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small chain
           3B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-3B
           PE=1 SV=2
          Length = 181

 Score =  134 bits (338), Expect = 2e-31
 Identities = 60/100 (60%), Positives = 75/100 (75%), Gaps = 1/100 (1%)
 Frame = -1

Query: 519 LSSEQIAKQVDYMVRQNFTACIEFD-NIGSVYREHFHGSGYYDGRYWVMWKLPMFGCTDS 343
           LS  ++AK+VDY++R  +  C+EF+   G VYREH +  GYYDGRYW MWKLP+FGCTDS
Sbjct: 76  LSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDS 135

Query: 342 ATVLREITECAKEYPKAFIRVLGFDAKRQVQVAGFLVQKP 223
           A VL+E+ EC KEYP AFIR++GFD  RQVQ   F+  KP
Sbjct: 136 AQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKP 175


>sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small chain
           2B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-2B
           PE=2 SV=2
          Length = 181

 Score =  134 bits (338), Expect = 2e-31
 Identities = 60/100 (60%), Positives = 75/100 (75%), Gaps = 1/100 (1%)
 Frame = -1

Query: 519 LSSEQIAKQVDYMVRQNFTACIEFD-NIGSVYREHFHGSGYYDGRYWVMWKLPMFGCTDS 343
           LS  ++AK+VDY++R  +  C+EF+   G VYREH +  GYYDGRYW MWKLP+FGCTDS
Sbjct: 76  LSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDS 135

Query: 342 ATVLREITECAKEYPKAFIRVLGFDAKRQVQVAGFLVQKP 223
           A VL+E+ EC KEYP AFIR++GFD  RQVQ   F+  KP
Sbjct: 136 AQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKP 175


>sp|Q39743|RBS1_FLAPR Ribulose bisphosphate carboxylase small chain
           1, chloroplastic OS=Flaveria pringlei GN=RBCS1 PE=2 SV=1
          Length = 173

 Score =  134 bits (337), Expect = 3e-31
 Identities = 59/101 (58%), Positives = 76/101 (75%), Gaps = 1/101 (0%)
 Frame = -1

Query: 519 LSSEQIAKQVDYMVRQNFTACIEFD-NIGSVYREHFHGSGYYDGRYWVMWKLPMFGCTDS 343
           L+  Q+AK+VDY++R  +  C+EF+   G VYRE+    GYYDGRYW MWKLPMFGCTDS
Sbjct: 71  LTEVQLAKEVDYLLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDS 130

Query: 342 ATVLREITECAKEYPKAFIRVLGFDAKRQVQVAGFLVQKPG 220
           A V++E+ EC KEYP+A+IR++GFD  RQVQ   F+  KPG
Sbjct: 131 AQVMKELQECKKEYPQAWIRIIGFDNVRQVQCISFIASKPG 171


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  134 bits (336), Expect = 3e-31
 Identities = 57/99 (57%), Positives = 73/99 (73%)
 Frame = -1

Query: 519 LSSEQIAKQVDYMVRQNFTACIEFDNIGSVYREHFHGSGYYDGRYWVMWKLPMFGCTDSA 340
           L+ EQ+ ++VDY++R  +  CIEF  +G VYRE+ +  GYYDGRYW MWKLPMFGCTDS+
Sbjct: 77  LTREQLGQEVDYLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSS 136

Query: 339 TVLREITECAKEYPKAFIRVLGFDAKRQVQVAGFLVQKP 223
            VL+E+ EC+K YP  F R++GFD  RQVQ   FL  KP
Sbjct: 137 QVLKEVDECSKAYPDYFNRIIGFDNTRQVQCISFLTYKP 175


>sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1
          Length = 183

 Score =  133 bits (335), Expect = 4e-31
 Identities = 59/100 (59%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
 Frame = -1

Query: 519 LSSEQIAKQVDYMVRQNFTACIEFD-NIGSVYREHFHGSGYYDGRYWVMWKLPMFGCTDS 343
           LSSE +AK+VDY++R+N+  C+EF+   G VYRE+    GYYDGRYW MWKLPMFGCTDS
Sbjct: 81  LSSESLAKEVDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDS 140

Query: 342 ATVLREITECAKEYPKAFIRVLGFDAKRQVQVAGFLVQKP 223
           + VL+E+ E  K YP++FIR++GFD  RQVQ   F+  KP
Sbjct: 141 SQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKP 180
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 101
Score (bit) 187.0
E-value 3.0e-46
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919982|Adiantum capillus-veneris mRNA, clone:
YMU001_000131_E10.
         (522 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   187   3e-46
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   150   4e-35
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   150   4e-35
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   149   8e-35
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   149   8e-35
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   149   8e-35
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   149   1e-34
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   143   5e-33
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   140   3e-32
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   137   2e-31
tr|O20253|O20253_SPIOL Ribulose bisphosphate carboxylase small c...   137   3e-31
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c...   137   4e-31
tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c...   136   6e-31
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c...   136   7e-31
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c...   135   9e-31
tr|A5PJI4|A5PJI4_BOVIN Putative uncharacterized protein OS=Bos t...   135   1e-30
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c...   135   2e-30
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   134   2e-30
tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c...   134   2e-30
tr|A9NNZ8|A9NNZ8_PICSI Ribulose bisphosphate carboxylase small c...   134   2e-30
tr|A9NML5|A9NML5_PICSI Ribulose bisphosphate carboxylase small c...   134   2e-30
tr|A9NMJ1|A9NMJ1_PICSI Ribulose bisphosphate carboxylase small c...   134   2e-30
tr|A9NL36|A9NL36_PICSI Ribulose bisphosphate carboxylase small c...   134   2e-30
tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small c...   134   3e-30
tr|Q9AQX3|Q9AQX3_FLAPA Ribulose bisphosphate carboxylase small c...   134   4e-30
tr|Q84NG5|Q84NG5_FLABI Ribulose bisphosphate carboxylase small c...   134   4e-30
tr|Q84NG4|Q84NG4_FLABI Ribulose bisphosphate carboxylase small c...   134   4e-30
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c...   134   4e-30
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c...   134   4e-30
tr|Q9ZRS6|Q9ZRS6_SECCE Ribulose bisphosphate carboxylase small c...   133   5e-30

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  187 bits (475), Expect = 3e-46
 Identities = 85/101 (84%), Positives = 94/101 (93%)
 Frame = -1

Query: 519 LSSEQIAKQVDYMVRQNFTACIEFDNIGSVYREHFHGSGYYDGRYWVMWKLPMFGCTDSA 340
           L+++QIAKQV+YMVR+ +T CIEFD IGSVYREHFHGSGYYDGRYW+MWKLPMFGCTDS 
Sbjct: 74  LTNDQIAKQVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSG 133

Query: 339 TVLREITECAKEYPKAFIRVLGFDAKRQVQVAGFLVQKPGQ 217
           +VLREI ECAKEYP AFIRVLGFDAKRQVQVAGFLV+KP Q
Sbjct: 134 SVLREIAECAKEYPTAFIRVLGFDAKRQVQVAGFLVKKPSQ 174


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  150 bits (379), Expect = 4e-35
 Identities = 67/102 (65%), Positives = 82/102 (80%), Gaps = 3/102 (2%)
 Frame = -1

Query: 519 LSSEQIAKQVDYMVRQNFTACIEFDNIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCT 349
           L+ +QIAKQVDYM++QN   CIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGCT
Sbjct: 112 LTDDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCT 171

Query: 348 DSATVLREITECAKEYPKAFIRVLGFDAKRQVQVAGFLVQKP 223
           DS+ VLREI EC  ++P  ++RVLGFD+K+QVQ+ GFLV +P
Sbjct: 172 DSSQVLREIQECKSQFPSCWVRVLGFDSKKQVQICGFLVSRP 213


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  150 bits (379), Expect = 4e-35
 Identities = 67/102 (65%), Positives = 82/102 (80%), Gaps = 3/102 (2%)
 Frame = -1

Query: 519 LSSEQIAKQVDYMVRQNFTACIEFDNIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCT 349
           L+ +QIAKQVDYM++QN   CIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGCT
Sbjct: 82  LTDDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCT 141

Query: 348 DSATVLREITECAKEYPKAFIRVLGFDAKRQVQVAGFLVQKP 223
           DS+ VLREI EC  ++P  ++RVLGFD+K+QVQ+ GFLV +P
Sbjct: 142 DSSQVLREIQECKSQFPSCWVRVLGFDSKKQVQICGFLVSRP 183


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  149 bits (376), Expect = 8e-35
 Identities = 67/102 (65%), Positives = 81/102 (79%), Gaps = 3/102 (2%)
 Frame = -1

Query: 519 LSSEQIAKQVDYMVRQNFTACIEFDNIGSVYREHFHGSG---YYDGRYWVMWKLPMFGCT 349
           LS +QIA+QVDYM++QN   CIEFD +G+V R +F GSG   YYDGRYW MWKLPMFGCT
Sbjct: 82  LSDDQIARQVDYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCT 141

Query: 348 DSATVLREITECAKEYPKAFIRVLGFDAKRQVQVAGFLVQKP 223
           DS+ VLREI EC   YP  ++RVLGFD+K+QVQ+ GFLV +P
Sbjct: 142 DSSQVLREIQECKTSYPSCWVRVLGFDSKKQVQICGFLVARP 183


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  149 bits (376), Expect = 8e-35
 Identities = 67/102 (65%), Positives = 82/102 (80%), Gaps = 3/102 (2%)
 Frame = -1

Query: 519 LSSEQIAKQVDYMVRQNFTACIEFDNIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCT 349
           L+ +QIAKQVD+M++QN   CIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGCT
Sbjct: 77  LTDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCT 136

Query: 348 DSATVLREITECAKEYPKAFIRVLGFDAKRQVQVAGFLVQKP 223
           DSA VLREI EC + +P  ++RVLGFD+K+QVQ+ GFLV +P
Sbjct: 137 DSAQVLREIQECKQSFPSCWVRVLGFDSKKQVQICGFLVARP 178


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  149 bits (376), Expect = 8e-35
 Identities = 67/102 (65%), Positives = 82/102 (80%), Gaps = 3/102 (2%)
 Frame = -1

Query: 519 LSSEQIAKQVDYMVRQNFTACIEFDNIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCT 349
           L+ +QIAKQVD+M++QN   CIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGCT
Sbjct: 77  LTDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCT 136

Query: 348 DSATVLREITECAKEYPKAFIRVLGFDAKRQVQVAGFLVQKP 223
           DSA VLREI EC + +P  ++RVLGFD+K+QVQ+ GFLV +P
Sbjct: 137 DSAQVLREIQECKQSFPSCWVRVLGFDSKKQVQICGFLVARP 178


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score =  149 bits (375), Expect = 1e-34
 Identities = 66/102 (64%), Positives = 82/102 (80%), Gaps = 3/102 (2%)
 Frame = -1

Query: 519 LSSEQIAKQVDYMVRQNFTACIEFDNIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCT 349
           L+ ++IAKQVDYM++QN   CIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGCT
Sbjct: 81  LTDDEIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCT 140

Query: 348 DSATVLREITECAKEYPKAFIRVLGFDAKRQVQVAGFLVQKP 223
           DS+ VLREI EC  ++P  ++RVLGFD+K+QVQ+ GFLV +P
Sbjct: 141 DSSQVLREIQECKTQFPSCWVRVLGFDSKKQVQICGFLVSRP 182


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
           chain OS=Lactuca sativa PE=2 SV=1
          Length = 181

 Score =  143 bits (361), Expect = 5e-33
 Identities = 62/100 (62%), Positives = 77/100 (77%), Gaps = 1/100 (1%)
 Frame = -1

Query: 519 LSSEQIAKQVDYMVRQNFTACIEFD-NIGSVYREHFHGSGYYDGRYWVMWKLPMFGCTDS 343
           LS E ++K++DY++R  +  C+EF+   G VYREH H  GYYDGRYW MWKLPMFGCTDS
Sbjct: 78  LSDEALSKEIDYLIRNKWVPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDS 137

Query: 342 ATVLREITECAKEYPKAFIRVLGFDAKRQVQVAGFLVQKP 223
           A V++E+ EC KEYP AFIRV+GFD+ RQVQ   F+V KP
Sbjct: 138 AQVMKEVGECKKEYPNAFIRVIGFDSVRQVQCISFIVSKP 177


>tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small
           chain OS=Panax ginseng PE=2 SV=1
          Length = 183

 Score =  140 bits (354), Expect = 3e-32
 Identities = 61/101 (60%), Positives = 77/101 (76%), Gaps = 1/101 (0%)
 Frame = -1

Query: 522 QLSSEQIAKQVDYMVRQNFTACIEFD-NIGSVYREHFHGSGYYDGRYWVMWKLPMFGCTD 346
           QL+ EQ++K+VDY++R  +  C+EF+   G VYREH H  GYYDGRYW MWKLPMFGCTD
Sbjct: 78  QLTQEQLSKEVDYLLRSGWVPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTD 137

Query: 345 SATVLREITECAKEYPKAFIRVLGFDAKRQVQVAGFLVQKP 223
           S+ VL+E+ EC KEYP A+IR++GFD  RQVQ   F+  KP
Sbjct: 138 SSQVLKEVEECKKEYPNAYIRIIGFDNVRQVQCISFIAFKP 178


>tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small
           chain OS=Populus trichocarpa PE=2 SV=1
          Length = 170

 Score =  137 bits (346), Expect = 2e-31
 Identities = 60/100 (60%), Positives = 74/100 (74%)
 Frame = -1

Query: 519 LSSEQIAKQVDYMVRQNFTACIEFDNIGSVYREHFHGSGYYDGRYWVMWKLPMFGCTDSA 340
           LS + IAK++DYM+++ +  C+EFD +GSV REH    GYYDGRYW +WKLPMFGCTDS+
Sbjct: 70  LSEDSIAKEIDYMMKKGWIPCLEFDEVGSVRREHSRMPGYYDGRYWTLWKLPMFGCTDSS 129

Query: 339 TVLREITECAKEYPKAFIRVLGFDAKRQVQVAGFLVQKPG 220
            VL EI EC K YP A+IR L FD K Q Q   F++QKPG
Sbjct: 130 QVLEEIHECKKAYPDAYIRCLAFDNKHQGQCMAFVIQKPG 169