BP920005 |
Clone id |
YMU001_000131_H07 |
Library |
YMU01 |
Length |
540 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000131_H07. |
Accession |
BP920005 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL654Contig1 |
Sequence |
CAGCCAATAAACTCCTTTTCATTCATCTCAAATATCTCAACAAGAGCCAGTCTTGATCAT CCAGCCAAACGGTAACAGCCGCATTGACATATAAACAGAACAGCCGTGGAAACCTTGATA TGGATCCATGCCTATATCAGAATTTTTCGAGGCAATGTGTCCGGTGATCCATACAAAGCC CTTCAAAATCCAGCACCAGTTATCTTGGGCCCGGCTTCTTTCCTTCTGAGGAGAAACTAA AATGCTGAACAATAAATATCACACACATAACCACAATGAGGCAACCAACAAGCGAGCTGG AAAACAGTGCCCCTGGTTGTTGCACTTGCATAAACCCATACACACCATTCGATGCAACTA CAATAATATCATTCAAGCCATCACCAGAAAAGTCGGCAACGACTAGTTCATGTGTAGGTG CAGATGGCAGGAAGAAGCTTCTGAGCTGCCTTCCACTAGATGATAAAATTGCTGCTTCAC TCTCACCAGCCACGAGGATCAACTGTGGTGGCCCATGAGCCCTCAACGAGATCACCTTCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P28930 |
Definition |
sp|P28930|TEGP_EHV1B Envelope protein Us9 OS=Equine herpesvirus 1 (strain Ab4p) |
Align length |
74 |
Score (bit) |
32.0 |
E-value |
2.0 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QE42 |
Definition |
tr|A7QE42|A7QE42_VITVI Chromosome chr4 scaffold_83, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
115 |
Score (bit) |
125.0 |
E-value |
2.0e-27 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920005|Adiantum capillus-veneris mRNA, clone: YMU001_000131_H07. (540 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QE42|A7QE42_VITVI Chromosome chr4 scaffold_83, whole genome... 125 2e-27 tr|A9PIE0|A9PIE0_POPTR Putative uncharacterized protein OS=Popul... 124 2e-27 tr|Q6YU98|Q6YU98_ORYSJ Os02g0100700 protein OS=Oryza sativa subs... 123 5e-27 tr|B8AGU5|B8AGU5_ORYSI Putative uncharacterized protein OS=Oryza... 123 5e-27 tr|Q9SD41|Q9SD41_ARATH Putative uncharacterized protein F24M12.9... 120 3e-26 tr|Q8W0Z8|Q8W0Z8_ARATH AT3g51050/F24M12_90 OS=Arabidopsis thalia... 120 3e-26 tr|A9RII4|A9RII4_PHYPA Predicted protein OS=Physcomitrella paten... 104 3e-21 tr|A9RAT3|A9RAT3_PHYPA Predicted protein (Fragment) OS=Physcomit... 99 2e-19 tr|A9RAX4|A9RAX4_PHYPA Predicted protein OS=Physcomitrella paten... 96 2e-18 tr|A8JCI7|A8JCI7_CHLRE Predicted protein (Fragment) OS=Chlamydom... 88 3e-16 tr|Q4E258|Q4E258_TRYCR Putative uncharacterized protein OS=Trypa... 67 5e-10 tr|Q4DCS8|Q4DCS8_TRYCR Putative uncharacterized protein OS=Trypa... 67 5e-10 tr|A3A244|A3A244_ORYSJ Putative uncharacterized protein OS=Oryza... 67 6e-10 tr|A4HKT4|A4HKT4_LEIBR Putative uncharacterized protein OS=Leish... 59 2e-07 tr|B5YMV2|B5YMV2_THAPS Predicted protein OS=Thalassiosira pseudo... 57 5e-07 tr|Q381H5|Q381H5_9TRYP FG-GAP repeat protein, putative OS=Trypan... 57 5e-07 tr|Q9U1E4|Q9U1E4_LEIMA Putative uncharacterized protein L1648.04... 52 3e-05 tr|A4I8B3|A4I8B3_LEIIN Putative uncharacterized protein OS=Leish... 50 8e-05 tr|B7FS65|B7FS65_PHATR Predicted protein OS=Phaeodactylum tricor... 50 1e-04 tr|A4S9R2|A4S9R2_OSTLU Predicted protein (Fragment) OS=Ostreococ... 50 1e-04 tr|A7SHV6|A7SHV6_NEMVE Predicted protein OS=Nematostella vectens... 39 0.23 tr|Q1CVL1|Q1CVL1_MYXXD FG-GAP repeat/fibronectin type III domain... 36 1.5 tr|A8BJT8|A8BJT8_GIALA VSP OS=Giardia lamblia ATCC 50803 GN=GL50... 36 1.5 tr|A3I014|A3I014_9SPHI Putative uncharacterized protein OS=Algor... 35 1.9 tr|Q86H53|Q86H53_DICDI Putative uncharacterized protein OS=Dicty... 35 2.5 tr|Q553M8|Q553M8_DICDI Putative uncharacterized protein OS=Dicty... 35 2.5 tr|B6BVU1|B6BVU1_9PROT Putative uncharacterized protein OS=beta ... 35 3.3 tr|Q0CV33|Q0CV33_ASPTN Ubiquitin-activating enzyme E1 1 OS=Asper... 35 3.3 tr|Q21ML9|Q21ML9_SACD2 Putative uncharacterized protein OS=Sacch... 34 4.3 tr|B2FIP7|B2FIP7_STRMK Putative glycosyltransferase family prote... 34 5.6
>tr|A7QE42|A7QE42_VITVI Chromosome chr4 scaffold_83, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00036853001 PE=4 SV=1 Length = 688
Score = 125 bits (313), Expect = 2e-27 Identities = 67/115 (58%), Positives = 82/115 (71%), Gaps = 3/115 (2%) Frame = -3
Query: 538 KVISLRAHGPPQLILVAGESEAAILSSSGRQLRSFFLPSAPTHELVVADFSGDGLNDIIV 359 K SLRAH +LIL AG+ EA ++S G L S LP+APTH L+ DFS DGL D+I+ Sbjct: 575 KAFSLRAHDNRELILAAGDQEAIMMSPGGSLLTSVELPAAPTHALICEDFSNDGLTDLIL 634
Query: 358 VASNGVYGFMQVQQPGALFSSSLVGCLIVVMCVIFIVQHFSFSSEGK---KPGPR 203 V SNGVYGF+Q +QPGALF S+LVGCLIVVM VIF+ Q+ + S +GK GPR Sbjct: 635 VTSNGVYGFVQTRQPGALFFSTLVGCLIVVMGVIFVTQYLN-SMKGKPRASSGPR 688
>tr|A9PIE0|A9PIE0_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 242
Score = 124 bits (312), Expect = 2e-27 Identities = 62/107 (57%), Positives = 78/107 (72%) Frame = -3
Query: 538 KVISLRAHGPPQLILVAGESEAAILSSSGRQLRSFFLPSAPTHELVVADFSGDGLNDIIV 359 K SLRAH Q+IL AG+ EAA++S G SF LP+ PTH L+ DF+ DGL D+IV Sbjct: 129 KAFSLRAHDNQQMILAAGDQEAAVISPGGSVQTSFDLPAPPTHALICEDFTNDGLTDLIV 188
Query: 358 VASNGVYGFMQVQQPGALFSSSLVGCLIVVMCVIFIVQHFSFSSEGK 218 V SNGVYGF+Q + PGALF S+LVGCL++VM VIF+ QH + S +GK Sbjct: 189 VTSNGVYGFVQTRSPGALFFSTLVGCLLIVMGVIFVTQHIN-SIKGK 234
>tr|Q6YU98|Q6YU98_ORYSJ Os02g0100700 protein OS=Oryza sativa subsp. japonica GN=B1370C05.8 PE=2 SV=1 Length = 701
Score = 123 bits (309), Expect = 5e-27 Identities = 61/107 (57%), Positives = 78/107 (72%) Frame = -3
Query: 538 KVISLRAHGPPQLILVAGESEAAILSSSGRQLRSFFLPSAPTHELVVADFSGDGLNDIIV 359 K SLRA+ P Q+I+ G+ EA ++S SG L S LP+ PTH LV+ DF+GDGL DII+ Sbjct: 587 KAFSLRAYDPKQVIIAGGDLEAVVISPSGGLLASIELPAPPTHALVLEDFNGDGLTDIIL 646
Query: 358 VASNGVYGFMQVQQPGALFSSSLVGCLIVVMCVIFIVQHFSFSSEGK 218 V S GVYGF+Q + PGALF S+LVGCLIVV+ VIF+ H + S+ GK Sbjct: 647 VTSGGVYGFVQTRHPGALFFSTLVGCLIVVIGVIFVSLHLNSSNSGK 693
>tr|B8AGU5|B8AGU5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_05449 PE=4 SV=1 Length = 701
Score = 123 bits (309), Expect = 5e-27 Identities = 61/107 (57%), Positives = 78/107 (72%) Frame = -3
Query: 538 KVISLRAHGPPQLILVAGESEAAILSSSGRQLRSFFLPSAPTHELVVADFSGDGLNDIIV 359 K SLRA+ P Q+I+ G+ EA ++S SG L S LP+ PTH LV+ DF+GDGL DII+ Sbjct: 587 KAFSLRAYDPKQVIIAGGDLEAVVISPSGGLLASIELPAPPTHALVLEDFNGDGLTDIIL 646
Query: 358 VASNGVYGFMQVQQPGALFSSSLVGCLIVVMCVIFIVQHFSFSSEGK 218 V S GVYGF+Q + PGALF S+LVGCLIVV+ VIF+ H + S+ GK Sbjct: 647 VTSGGVYGFVQTRHPGALFFSTLVGCLIVVIGVIFVSLHLNSSNSGK 693
>tr|Q9SD41|Q9SD41_ARATH Putative uncharacterized protein F24M12.90 OS=Arabidopsis thaliana GN=F24M12.90 PE=4 SV=1 Length = 680
Score = 120 bits (302), Expect = 3e-26 Identities = 62/107 (57%), Positives = 74/107 (69%) Frame = -3
Query: 538 KVISLRAHGPPQLILVAGESEAAILSSSGRQLRSFFLPSAPTHELVVADFSGDGLNDIIV 359 K SLR H +IL G+ A I+S G L S LPS PTH L+ DFS DGL D+IV Sbjct: 568 KPFSLRIHDNQPMILAGGDQAAVIISPGGSILASIELPSQPTHALITDDFSNDGLTDVIV 627
Query: 358 VASNGVYGFMQVQQPGALFSSSLVGCLIVVMCVIFIVQHFSFSSEGK 218 + SNGVYGF+Q +QPGALF SSLVGCL+VVM VIF+ QH + S +GK Sbjct: 628 MTSNGVYGFVQTRQPGALFFSSLVGCLLVVMAVIFVTQHLN-SIQGK 673
>tr|Q8W0Z8|Q8W0Z8_ARATH AT3g51050/F24M12_90 OS=Arabidopsis thaliana PE=2 SV=1 Length = 698
Score = 120 bits (302), Expect = 3e-26 Identities = 62/107 (57%), Positives = 74/107 (69%) Frame = -3
Query: 538 KVISLRAHGPPQLILVAGESEAAILSSSGRQLRSFFLPSAPTHELVVADFSGDGLNDIIV 359 K SLR H +IL G+ A I+S G L S LPS PTH L+ DFS DGL D+IV Sbjct: 586 KPFSLRIHDNQPMILAGGDQAAVIISPGGSILASIELPSQPTHALITDDFSNDGLTDVIV 645
Query: 358 VASNGVYGFMQVQQPGALFSSSLVGCLIVVMCVIFIVQHFSFSSEGK 218 + SNGVYGF+Q +QPGALF SSLVGCL+VVM VIF+ QH + S +GK Sbjct: 646 MTSNGVYGFVQTRQPGALFFSSLVGCLLVVMAVIFVTQHLN-SIQGK 691
>tr|A9RII4|A9RII4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_159278 PE=4 SV=1 Length = 721
Score = 104 bits (260), Expect = 3e-21 Identities = 49/110 (44%), Positives = 72/110 (65%) Frame = -3
Query: 532 ISLRAHGPPQLILVAGESEAAILSSSGRQLRSFFLPSAPTHELVVADFSGDGLNDIIVVA 353 + LR +G P+ IL GE E ++S G + F LP++ + ++ ADFSGDGLND+I+V Sbjct: 606 LPLRKNGEPEAILAIGEIEGVVISPKGSPVTEFPLPASASAPIIYADFSGDGLNDLILVT 665
Query: 352 SNGVYGFMQVQQPGALFSSSLVGCLIVVMCVIFIVQHFSFSSEGKKPGPR 203 +G+YGF+Q ++PGA+ S+LVG LI+VM VIF+ QH +P R Sbjct: 666 HDGIYGFVQARRPGAILFSTLVGVLILVMGVIFVTQHLGTGKGKSRPAER 715
>tr|A9RAT3|A9RAT3_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_110752 PE=4 SV=1 Length = 549
Score = 98.6 bits (244), Expect = 2e-19 Identities = 49/105 (46%), Positives = 71/105 (67%) Frame = -3
Query: 532 ISLRAHGPPQLILVAGESEAAILSSSGRQLRSFFLPSAPTHELVVADFSGDGLNDIIVVA 353 + LR +G IL GE+EA +LS G + FLP+ + ++ DFSGD LND+I+V+ Sbjct: 434 LPLRKNGEADAILAVGEAEAVVLSPKGSYVTQVFLPTPGSAPMIYDDFSGDKLNDLILVS 493
Query: 352 SNGVYGFMQVQQPGALFSSSLVGCLIVVMCVIFIVQHFSFSSEGK 218 +G+YGF+Q +QPGA+ SLVG LI+VM VIF+ QH+ + +GK Sbjct: 494 EDGIYGFVQTRQPGAILFVSLVGVLILVMGVIFVTQHWG-TGKGK 537
>tr|A9RAX4|A9RAX4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_110865 PE=4 SV=1 Length = 706
Score = 95.5 bits (236), Expect = 2e-18 Identities = 48/110 (43%), Positives = 67/110 (60%) Frame = -3
Query: 532 ISLRAHGPPQLILVAGESEAAILSSSGRQLRSFFLPSAPTHELVVADFSGDGLNDIIVVA 353 + LR +G IL GE EA +LS G + LPSA + ++ DFSGD LND+I+V Sbjct: 591 LPLRKNGEVDAILAVGELEAVVLSPKGSHVAQVPLPSAGSAPIIYDDFSGDNLNDLILVT 650
Query: 352 SNGVYGFMQVQQPGALFSSSLVGCLIVVMCVIFIVQHFSFSSEGKKPGPR 203 +G++GF+Q +QPGA+ +L+G LI+VM VIF+ QH K G R Sbjct: 651 KDGIFGFVQTRQPGAILFLTLMGVLILVMGVIFVTQHLGSGKGKSKAGER 700
>tr|A8JCI7|A8JCI7_CHLRE Predicted protein (Fragment) OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_152723 PE=4 SV=1 Length = 786
Score = 87.8 bits (216), Expect = 3e-16 Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 1/99 (1%) Frame = -3
Query: 532 ISLRAHGPPQLILVAGESEAAILSSSGRQLRSFFLPSAPTHELVVADFSGDGLNDIIVVA 353 ++L H P +L AG A I+S G L LP+APT LVV+DF+GDGLNDIIVV Sbjct: 651 MALYTHAVPTTVLAAGTDHAVIVSEHGHVLAELELPAAPTQPLVVSDFNGDGLNDIIVVT 710
Query: 352 SNGVYGFMQVQQ-PGALFSSSLVGCLIVVMCVIFIVQHF 239 + G+YG++QVQ G + S+L+ L++ + +++ QH+ Sbjct: 711 NKGLYGYVQVQHLAGGMSLSALLLTLLIALGLVYFTQHY 749
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