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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920025
Clone id YMU001_000132_B11
Library
Length 486
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000132_B11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTGACAGATGCACATGTTTTTCAAAAGAACAGAGCGCCACATTTTACTAAAACCTACGGT
TTTAGTCCTAGCCTTCACTAACTTGATCATAATGACTTACACTAAGTATTTCAAGTTTAA
GTATCAAAGCATTAACTATTGCTTTCCAGAGCACAGCATGAATTTGGCTAATCATAAGAA
GAAGAGAAAGTGCACACATATTCCAATTATTATGTCTATTTCTTTAGACAGCGGGCAAAT
TACAGAGAACAACTTGCAGGCTTAAAGAGAATTCTCTTTATCAAGAAATGCCGGCTTAGC
TTTCTGTTTGTCCTAGCCTTTCAGCTCTTCGCTTTTTGGTCACATCATAAACCTGATAGC
AGCACCCTGCACTCACGATGATAACAAGGACATCCCCAAACAGCTTTACTTTCTGAGCAG
TTCCCTTGGTTGATTTGTAATGTTTTAAAGCAGGATCCTCTTCTAAGAGAGCTTTCTCAC
GTTCAC
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920025|Adiantum capillus-veneris mRNA, clone:
YMU001_000132_B11.
         (486 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done

 ***** No hits found ******
tr_hit_id A9NLG7
Definition tr|A9NLG7|A9NLG7_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 55
Score (bit) 65.9
E-value 1.0e-09
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920025|Adiantum capillus-veneris mRNA, clone:
YMU001_000132_B11.
         (486 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NLG7|A9NLG7_PICSI Putative uncharacterized protein OS=Picea...    66   1e-09
tr|A9PJS2|A9PJS2_POPJC Putative uncharacterized protein OS=Popul...    65   2e-09
tr|A9P9R2|A9P9R2_POPTR Putative uncharacterized protein OS=Popul...    65   2e-09
tr|Q8LBU0|Q8LBU0_ARATH Putative uncharacterized protein OS=Arabi...    61   2e-08
tr|Q3E870|Q3E870_ARATH Uncharacterized protein At5g62575.2 (At5g...    61   2e-08
tr|Q9STT0|Q9STT0_ARATH Putative uncharacterized protein T23J7.16...    58   2e-07
tr|Q9C5E8|Q9C5E8_ARATH Putative uncharacterized protein At3g4783...    58   2e-07
tr|A7PD60|A7PD60_VITVI Chromosome chr17 scaffold_12, whole genom...    58   3e-07
tr|B6T2U7|B6T2U7_MAIZE Putative uncharacterized protein OS=Zea m...    49   2e-04
tr|B6T2I9|B6T2I9_MAIZE Putative uncharacterized protein OS=Zea m...    49   2e-04
tr|Q6H611|Q6H611_ORYSJ Os09g0382500 protein OS=Oryza sativa subs...    46   8e-04
tr|A2XWZ5|A2XWZ5_ORYSI Putative uncharacterized protein OS=Oryza...    46   8e-04
tr|B6TM38|B6TM38_MAIZE Putative uncharacterized protein OS=Zea m...    45   0.002
tr|B4FHU9|B4FHU9_MAIZE Putative uncharacterized protein OS=Zea m...    45   0.002
tr|A3BYE2|A3BYE2_ORYSJ Putative uncharacterized protein OS=Oryza...    39   0.13 
tr|B6AK00|B6AK00_9CRYT Putative uncharacterized protein OS=Crypt...    35   2.4  
tr|B2G2P3|B2G2P3_PRORE Conjugal transfer protein OS=Providencia ...    33   7.0  
tr|A8R757|A8R757_SALDU TrwF protein OS=Salmonella dublin GN=trwF...    33   7.0  
tr|A7KZU8|A7KZU8_SALDU TrwF OS=Salmonella dublin GN=trwF PE=4 SV=1     33   7.0  
tr|B2UZ56|B2UZ56_CLOBA Alginate O-acetylation protein OS=Clostri...    33   9.1  

>tr|A9NLG7|A9NLG7_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=4 SV=1
          Length = 102

 Score = 65.9 bits (159), Expect = 1e-09
 Identities = 30/55 (54%), Positives = 42/55 (76%)
 Frame = -3

Query: 481 REKALLEEDPALKHYKSTKGTAQKVKLFGDVLVIIVSAGCCYQVYDVTKKRRAER 317
           REKALLEEDPALK +KS K + ++++   D+L I+V +GCCY++Y  T  R+AER
Sbjct: 40  REKALLEEDPALKKFKSYKKSIRRMQTARDILTIVVISGCCYEIYYRTMMRKAER 94


>tr|A9PJS2|A9PJS2_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=4 SV=1
          Length = 100

 Score = 64.7 bits (156), Expect = 2e-09
 Identities = 31/61 (50%), Positives = 41/61 (67%)
 Frame = -3

Query: 481 REKALLEEDPALKHYKSTKGTAQKVKLFGDVLVIIVSAGCCYQVYDVTKKRRAERLGQTE 302
           RE+ALL EDP+LK +KS K +  ++K FGDVL ++V AGCCY++Y  T  R   R    E
Sbjct: 39  REQALLAEDPSLKRFKSHKKSVWRLKRFGDVLTLVVVAGCCYEIYVKTVMREEARKQAKE 98

Query: 301 S 299
           S
Sbjct: 99  S 99


>tr|A9P9R2|A9P9R2_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=4 SV=1
          Length = 100

 Score = 64.7 bits (156), Expect = 2e-09
 Identities = 31/61 (50%), Positives = 41/61 (67%)
 Frame = -3

Query: 481 REKALLEEDPALKHYKSTKGTAQKVKLFGDVLVIIVSAGCCYQVYDVTKKRRAERLGQTE 302
           RE+ALL EDP+LK +KS K +  ++K FGDVL ++V AGCCY++Y  T  R   R    E
Sbjct: 39  REQALLAEDPSLKRFKSHKKSVWRLKRFGDVLTLVVVAGCCYEIYVKTVMREEARKQAKE 98

Query: 301 S 299
           S
Sbjct: 99  S 99


>tr|Q8LBU0|Q8LBU0_ARATH Putative uncharacterized protein
           OS=Arabidopsis thaliana PE=4 SV=1
          Length = 99

 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 27/45 (60%), Positives = 34/45 (75%)
 Frame = -3

Query: 481 REKALLEEDPALKHYKSTKGTAQKVKLFGDVLVIIVSAGCCYQVY 347
           REKALL ED ALK +KS K +  K+K  GDVL ++V AGCCY++Y
Sbjct: 39  REKALLAEDSALKRFKSHKKSVHKLKRIGDVLTVVVVAGCCYEIY 83


>tr|Q3E870|Q3E870_ARATH Uncharacterized protein At5g62575.2
           (At5g62575) OS=Arabidopsis thaliana GN=At5g62575 PE=4
           SV=1
          Length = 100

 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 27/45 (60%), Positives = 34/45 (75%)
 Frame = -3

Query: 481 REKALLEEDPALKHYKSTKGTAQKVKLFGDVLVIIVSAGCCYQVY 347
           REKALL ED ALK +KS K +  K+K  GDVL ++V AGCCY++Y
Sbjct: 40  REKALLAEDSALKRFKSHKKSVHKLKRIGDVLTVVVVAGCCYEIY 84


>tr|Q9STT0|Q9STT0_ARATH Putative uncharacterized protein T23J7.160
           OS=Arabidopsis thaliana GN=T23J7.160 PE=4 SV=1
          Length = 334

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 25/54 (46%), Positives = 37/54 (68%)
 Frame = -3

Query: 481 REKALLEEDPALKHYKSTKGTAQKVKLFGDVLVIIVSAGCCYQVYDVTKKRRAE 320
           REKALL ED +L+ +KS K    ++K  GDVL ++V AGCCY++Y    ++ A+
Sbjct: 279 REKALLAEDASLRRFKSHKKGVHRLKRIGDVLTVVVVAGCCYEIYARVMRKEAQ 332


>tr|Q9C5E8|Q9C5E8_ARATH Putative uncharacterized protein At3g47833
           (Putative uncharacterized protein) OS=Arabidopsis
           thaliana GN=At3g47833 PE=2 SV=1
          Length = 93

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 25/54 (46%), Positives = 37/54 (68%)
 Frame = -3

Query: 481 REKALLEEDPALKHYKSTKGTAQKVKLFGDVLVIIVSAGCCYQVYDVTKKRRAE 320
           REKALL ED +L+ +KS K    ++K  GDVL ++V AGCCY++Y    ++ A+
Sbjct: 38  REKALLAEDASLRRFKSHKKGVHRLKRIGDVLTVVVVAGCCYEIYARVMRKEAQ 91


>tr|A7PD60|A7PD60_VITVI Chromosome chr17 scaffold_12, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00016151001
           PE=4 SV=1
          Length = 102

 Score = 57.8 bits (138), Expect = 3e-07
 Identities = 25/45 (55%), Positives = 34/45 (75%)
 Frame = -3

Query: 481 REKALLEEDPALKHYKSTKGTAQKVKLFGDVLVIIVSAGCCYQVY 347
           REKALL ++P+LK +KS K    ++K  GDVL I+V AGCCY++Y
Sbjct: 39  REKALLADNPSLKRFKSHKRNVWRLKRVGDVLTIVVVAGCCYEIY 83


>tr|B6T2U7|B6T2U7_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=4 SV=1
          Length = 89

 Score = 48.5 bits (114), Expect = 2e-04
 Identities = 23/44 (52%), Positives = 31/44 (70%)
 Frame = -3

Query: 481 REKALLEEDPALKHYKSTKGTAQKVKLFGDVLVIIVSAGCCYQV 350
           REKALLEED ALK +KS K + ++V   G+VL + V  GC Y++
Sbjct: 38  REKALLEEDVALKRFKSYKNSVKQVSKIGNVLTLAVVFGCSYEL 81


>tr|B6T2I9|B6T2I9_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=4 SV=1
          Length = 89

 Score = 48.5 bits (114), Expect = 2e-04
 Identities = 23/44 (52%), Positives = 31/44 (70%)
 Frame = -3

Query: 481 REKALLEEDPALKHYKSTKGTAQKVKLFGDVLVIIVSAGCCYQV 350
           REKALLEED ALK +KS K + ++V   G+VL + V  GC Y++
Sbjct: 38  REKALLEEDVALKRFKSYKNSVKQVSKIGNVLTLAVVFGCSYEL 81