NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920030
Clone id YMU001_000132_C04
Library
Length 474
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000132_C04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTGGCATTGAAGCTTTTGCTGATAACACATCAATATCTACCAGCTTACATAGTAAATAGG
AAAAAAGAGCATCACAACGATACTTCTCGGCCTACCTCTGCACTGGCAGAATGAGCCAAG
CAGTTAGCTGATTGGATTTGCCCATTGATAAAAGAAGGGCACAGTGGAGACATATCACCA
TGCTGAAAGCGGATGGTAGCGGGAAACTTCGCTCAAATCCACAGAGCGATGCTAACAAAA
GAAACAAAATACTACACGTAACTATGTATGCTTGACCACATCTGCTCCTGAAGGTTTGAT
TTTATGGAGTGTGCTGGGAAGTGTGCTAAAGCTTCTCTAATAGAGTACCAAGCCTGACGA
GCAAAGTTGTCTTTTGCTTCTTGGTGGGAACAGATATCATTTCATCGTAAAGAGATGCGT
CATCCCTCACGACACTTTCATCCTTCTCAGAGTAGTCCTCTCTCCTCAATGATA
■■Homology search results ■■ -
sp_hit_id Q6BQK9
Definition sp|Q6BQK9|NTE1_DEBHA Lysophospholipase NTE1 OS=Debaryomyces hansenii
Align length 47
Score (bit) 29.6
E-value 7.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920030|Adiantum capillus-veneris mRNA, clone:
YMU001_000132_C04.
         (474 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6BQK9|NTE1_DEBHA Lysophospholipase NTE1 OS=Debaryomyces hans...    30   7.1  
sp|Q80T74|KLH29_MOUSE Kelch-like protein 29 OS=Mus musculus GN=K...    29   9.3  
sp|Q96CT2|KLH29_HUMAN Kelch-like protein 29 OS=Homo sapiens GN=K...    29   9.3  

>sp|Q6BQK9|NTE1_DEBHA Lysophospholipase NTE1 OS=Debaryomyces
           hansenii GN=NTE1 PE=3 SV=2
          Length = 1544

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 14/47 (29%), Positives = 31/47 (65%)
 Frame = +3

Query: 246 KILHVTMYA*PHLLLKV*FYGVCWEVC*SFSNRVPSLTSKVVFCFLV 386
           KI+++ +Y  P++++ +  + V +++  S S+ V +LT  + FCFL+
Sbjct: 52  KIMNIFLYYIPNIIVNL--FSVNFQITLSLSSIVITLTGIISFCFLI 96


>sp|Q80T74|KLH29_MOUSE Kelch-like protein 29 OS=Mus musculus
           GN=Klhl29 PE=2 SV=2
          Length = 655

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 21/70 (30%), Positives = 32/70 (45%)
 Frame = -2

Query: 305 IKSNLQEQMWSSIHSYV*YFVSFVSIALWI*AKFPATIRFQHGDMSPLCPSFINGQIQSA 126
           + SNLQ  +   +  +V Y  S V  +        A  +FQ      +C SF+  Q+ ++
Sbjct: 156 VLSNLQADVLELLLEFV-YTGSLVIDSANAKTLLEAASKFQFHTFCKVCVSFLEKQLTAS 214

Query: 125 NCLAHSASAE 96
           NCL   A AE
Sbjct: 215 NCLGVLAMAE 224


>sp|Q96CT2|KLH29_HUMAN Kelch-like protein 29 OS=Homo sapiens
           GN=KLHL29 PE=2 SV=2
          Length = 655

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 21/70 (30%), Positives = 32/70 (45%)
 Frame = -2

Query: 305 IKSNLQEQMWSSIHSYV*YFVSFVSIALWI*AKFPATIRFQHGDMSPLCPSFINGQIQSA 126
           + SNLQ  +   +  +V Y  S V  +        A  +FQ      +C SF+  Q+ ++
Sbjct: 156 VLSNLQADVLELLLEFV-YTGSLVIDSANAKTLLEAASKFQFHTFCKVCVSFLEKQLTAS 214

Query: 125 NCLAHSASAE 96
           NCL   A AE
Sbjct: 215 NCLGVLAMAE 224
tr_hit_id B4LE53
Definition tr|B4LE53|B4LE53_DROVI GJ13009 OS=Drosophila virilis
Align length 56
Score (bit) 36.6
E-value 0.64
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920030|Adiantum capillus-veneris mRNA, clone:
YMU001_000132_C04.
         (474 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4LE53|B4LE53_DROVI GJ13009 OS=Drosophila virilis GN=GJ13009 ...    37   0.64 
tr|B4KYR7|B4KYR7_DROMO GI12867 OS=Drosophila mojavensis GN=GI128...    33   7.1  

>tr|B4LE53|B4LE53_DROVI GJ13009 OS=Drosophila virilis GN=GJ13009
           PE=4 SV=1
          Length = 495

 Score = 36.6 bits (83), Expect = 0.64
 Identities = 19/56 (33%), Positives = 33/56 (58%)
 Frame = -3

Query: 262 VTCSILFLLLASLCGFERSFPLPSAFSMVICLHCALLLSMGKSNQLTAWLILPVQR 95
           V+ ++L L+LA+ CG + S     AF+ +I ++    LS+  +N+ T WL  P+ R
Sbjct: 170 VSGNVLDLMLATSCGMQPSEQYKQAFTDLIEIYRKRFLSIKSANRFTFWLASPLMR 225


>tr|B4KYR7|B4KYR7_DROMO GI12867 OS=Drosophila mojavensis GN=GI12867
           PE=4 SV=1
          Length = 488

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 18/57 (31%), Positives = 31/57 (54%)
 Frame = -3

Query: 265 IVTCSILFLLLASLCGFERSFPLPSAFSMVICLHCALLLSMGKSNQLTAWLILPVQR 95
           +V+ ++L L+L   CG + S     AF  +  L+    LS+  +N+LT W+  P+ R
Sbjct: 169 LVSDNVLDLMLCISCGMQPSEHYKQAFKELTELYRKRFLSVRSANRLTFWVCSPLTR 225