BP920033 |
Clone id |
YMU001_000132_C07 |
Library |
YMU01 |
Length |
453 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000132_C07. |
Accession |
BP920033 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CAGTTCCCAGAGAGACCATAAGCAATAGTAGGCCAGAGACAAAAGCCATTCGCCCCAGCT GATCCTGCCAAGTTCGGCGAGGTAGAAACAAGATGGTGATAACTGACAAAAAAACCACGA GTCCCAAACGAACGGATATATGGGAACGAGATGGCAAAAACACCAAAACTAAGAGCCATG CCTGCTTGACGCGAGGATCCAGTGAGTGGAGGGGAGTGGATGGGGAGTAGATATATTGTG CAATGGGGGCAGAGCTAGCACCAGCAATGAGCCTCATAAGCTCCTCCCCAAACGAAAGGC CAGAGGACCTCTTTAATTTCTGCAACAGGTTGAGATGGGGCATTGCCGTTCCACCTTCGC TGGCAGAAACACCTGCAACCCATAGTCGTCGCTTGCTCTCTCCCCTCCTTCCCACCTTGT GAGGAGTCCAACTGGCCGCACGAGTCAACCGGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8YZH6 |
Definition |
sp|Q8YZH6|YC92L_ANASP Ycf92-like protein OS=Anabaena sp. (strain PCC 7120) |
Align length |
68 |
Score (bit) |
52.8 |
E-value |
7.0e-07 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RLG3 |
Definition |
tr|A9RLG3|A9RLG3_PHYPA ATP-binding cassette transporter, subfamily I, member 12, ABC component protein PpABCI12 OS=Physcomitrella patens subsp. patens |
Align length |
78 |
Score (bit) |
119.0 |
E-value |
8.0e-26 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920033|Adiantum capillus-veneris mRNA, clone: YMU001_000132_C07. (453 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RLG3|A9RLG3_PHYPA ATP-binding cassette transporter, subfami... 119 8e-26 tr|A7NWD6|A7NWD6_VITVI Chromosome chr5 scaffold_2, whole genome ... 103 3e-21 tr|B4FJJ6|B4FJJ6_MAIZE Putative uncharacterized protein OS=Zea m... 102 1e-20 tr|B8AY20|B8AY20_ORYSI Putative uncharacterized protein OS=Oryza... 98 2e-19 tr|Q6ATY7|Q6ATY7_ORYSJ Os05g0400600 protein OS=Oryza sativa subs... 97 3e-19 tr|A3B3U7|A3B3U7_ORYSJ Putative uncharacterized protein OS=Oryza... 97 3e-19 tr|Q944H2|Q944H2_ARATH AT3g21580/MIL23_14 (Putative uncharacteri... 92 1e-17 tr|A4S9Y7|A4S9Y7_OSTLU ABC(Membrane) family transporter: cobalt ... 65 2e-09 tr|P74129|P74129_SYNY3 Slr1978 protein OS=Synechocystis sp. (str... 63 6e-09 tr|Q00SK4|Q00SK4_OSTTA Homology to unknown gene OS=Ostreococcus ... 61 3e-08 tr|Q8DM39|Q8DM39_THEEB Tlr0284 protein OS=Thermosynechococcus el... 60 5e-08 tr|B4WRZ0|B4WRZ0_9SYNE Cobalt transport protein OS=Synechococcus... 60 5e-08 tr|B0CBR8|B0CBR8_ACAM1 Cobalt transport protein, putative OS=Aca... 58 2e-07 tr|B5W8Z7|B5W8Z7_SPIMA Cobalt transport protein OS=Arthrospira m... 58 2e-07 tr|B1XIM8|B1XIM8_SYNP2 Putative cobalt transport protein OS=Syne... 57 4e-07 tr|B1WTP8|B1WTP8_CYAA5 Putative cobalt ABC transporter permease ... 57 4e-07 tr|A3IWK3|A3IWK3_9CHRO Putative uncharacterized protein OS=Cyano... 57 4e-07 tr|Q2JLI6|Q2JLI6_SYNJB Putative transporter OS=Synechococcus sp.... 57 6e-07 tr|Q4C386|Q4C386_CROWT Cobalt transport protein OS=Crocosphaera ... 56 8e-07 tr|B7JV14|B7JV14_SYNP8 Cobalt transport protein OS=Synechococcus... 56 1e-06 tr|B4C3S9|B4C3S9_9CHRO Cobalt transport protein OS=Cyanothece sp... 56 1e-06 tr|A8IVQ4|A8IVQ4_CHLRE Cobalt transport protein (Fragment) OS=Ch... 55 2e-06 tr|Q2JUF6|Q2JUF6_SYNJA Putative transporter OS=Synechococcus sp.... 55 2e-06 tr|Q5N168|Q5N168_SYNP6 Putative uncharacterized protein OS=Synec... 54 3e-06 tr|P72549|P72549_SYNE7 Cobalt transport system permease protein ... 54 3e-06 tr|Q10V99|Q10V99_TRIEI Cobalt transport protein OS=Trichodesmium... 54 4e-06 tr|B2J1L1|B2J1L1_NOSP7 Cobalt transport protein OS=Nostoc puncti... 54 5e-06 tr|B4AYE7|B4AYE7_9CHRO Cobalt transport protein OS=Cyanothece sp... 53 7e-06 tr|A0ZLA8|A0ZLA8_NODSP Cobalt transport protein (Fragment) OS=No... 53 7e-06 tr|Q3M928|Q3M928_ANAVT Cobalt transport protein OS=Anabaena vari... 53 9e-06
>tr|A9RLG3|A9RLG3_PHYPA ATP-binding cassette transporter, subfamily I, member 12, ABC component protein PpABCI12 OS=Physcomitrella patens subsp. patens GN=ppabci12 PE=4 SV=1 Length = 303
Score = 119 bits (298), Expect = 8e-26 Identities = 56/78 (71%), Positives = 67/78 (85%) Frame = -3
Query: 277 MRLIAGASSAPIAQYIYSPSTPLHSLDPRVKQAWLLVLVFLPSRSHISVRLGLVVFLSVI 98 MR++AGASSAPIAQYI P TPLH+LDPRVKQAWLL LV LP+RSH+++R+ +V FL+V Sbjct: 1 MRMVAGASSAPIAQYIPFPVTPLHTLDPRVKQAWLLALVVLPARSHMAIRISMVAFLAVA 60
Query: 97 TILFLPRRTWQDQLGRMA 44 T+ LPRR WQDQLGRMA Sbjct: 61 TMCTLPRRIWQDQLGRMA 78
>tr|A7NWD6|A7NWD6_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019879001 PE=4 SV=1 Length = 348
Score = 103 bits (258), Expect = 3e-21 Identities = 46/87 (52%), Positives = 68/87 (78%) Frame = -3
Query: 301 GLSFGEELMRLIAGASSAPIAQYIYSPSTPLHSLDPRVKQAWLLVLVFLPSRSHISVRLG 122 G+ + ++RLI+ A+S+PI+Q+I SP+T LHS+DPR+K WLL LV LP+RSHI +R G Sbjct: 81 GVVAADRILRLISSATSSPISQFISSPTTFLHSVDPRIKLVWLLALVLLPARSHIIMRFG 140
Query: 121 LVVFLSVITILFLPRRTWQDQLGRMAF 41 LVV+L+ +++ LP + W DQLGR++F Sbjct: 141 LVVYLACLSVWILPTQVWMDQLGRVSF 167
>tr|B4FJJ6|B4FJJ6_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 394
Score = 102 bits (253), Expect = 1e-20 Identities = 63/148 (42%), Positives = 90/148 (60%), Gaps = 17/148 (11%) Frame = -3
Query: 439 AASWTPHKV---GRRGESKRRLWVAGVSA----------SEGGTAMPHLNLLQKLKRSS- 302 A SW P + RR S+ L V SA +G TA ++ + R++ Sbjct: 23 APSWLPLQAKPGARRTGSRVALLVPSASAPAPASPSPSGKDGTTASAATKWVEWIPRAAA 82
Query: 301 --GLSFG-EELMRLIAGASSAPIAQYIYSPSTPLHSLDPRVKQAWLLVLVFLPSRSHISV 131 G + G E+++RLI+GA++ PI Q++ SP T LHS+DPRVK WLL LV LP+RS+I + Sbjct: 83 GAGSAVGPEQVLRLISGAAATPICQFVDSPRTFLHSVDPRVKLVWLLSLVVLPARSNIYM 142
Query: 130 RLGLVVFLSVITILFLPRRTWQDQLGRM 47 R GLVVFL++I++ LP W+DQLGR+ Sbjct: 143 RFGLVVFLALISMWVLPNHVWKDQLGRV 170
>tr|B8AY20|B8AY20_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_19892 PE=4 SV=1 Length = 388
Score = 97.8 bits (242), Expect = 2e-19 Identities = 53/133 (39%), Positives = 80/133 (60%), Gaps = 2/133 (1%) Frame = -3
Query: 436 ASWTPHKVGRRGESKRRL--WVAGVSASEGGTAMPHLNLLQKLKRSSGLSFGEELMRLIA 263 A+ P K +GE+ + W A + + G A P E+++RLI+ Sbjct: 50 AASDPSKAAGKGEAGDAVARWAAWIPRAAVGGAGP-----------------EQVLRLIS 92
Query: 262 GASSAPIAQYIYSPSTPLHSLDPRVKQAWLLVLVFLPSRSHISVRLGLVVFLSVITILFL 83 GA++ PI Q++ SP T LH++DPRVK WLL LV LP+RS+I +R GLV +L+++++ L Sbjct: 93 GAAATPICQFVDSPRTFLHAIDPRVKLVWLLALVVLPARSNIYLRFGLVAYLTLLSMWVL 152
Query: 82 PRRTWQDQLGRMA 44 P W+DQLGR+A Sbjct: 153 PNHVWKDQLGRVA 165
>tr|Q6ATY7|Q6ATY7_ORYSJ Os05g0400600 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0035J16.6 PE=2 SV=1 Length = 388
Score = 97.4 bits (241), Expect = 3e-19 Identities = 53/133 (39%), Positives = 80/133 (60%), Gaps = 2/133 (1%) Frame = -3
Query: 436 ASWTPHKVGRRGESKRRL--WVAGVSASEGGTAMPHLNLLQKLKRSSGLSFGEELMRLIA 263 A+ P K +GE+ + W A + + G A P E+++RLI+ Sbjct: 50 AASDPSKAAGKGEAGDAVARWAAWIPRAAVGGAGP-----------------EQVLRLIS 92
Query: 262 GASSAPIAQYIYSPSTPLHSLDPRVKQAWLLVLVFLPSRSHISVRLGLVVFLSVITILFL 83 GA++ PI Q++ SP T LH++DPRVK WLL LV LP+RS+I +R GLV +L+++++ L Sbjct: 93 GAAATPICQFVDSPRTFLHAIDPRVKLVWLLALVVLPARSNIYLRFGLVAYLTLLSMWVL 152
Query: 82 PRRTWQDQLGRMA 44 P W+DQLGR+A Sbjct: 153 PNHIWKDQLGRVA 165
>tr|A3B3U7|A3B3U7_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_017719 PE=4 SV=1 Length = 433
Score = 97.4 bits (241), Expect = 3e-19 Identities = 53/133 (39%), Positives = 80/133 (60%), Gaps = 2/133 (1%) Frame = -3
Query: 436 ASWTPHKVGRRGESKRRL--WVAGVSASEGGTAMPHLNLLQKLKRSSGLSFGEELMRLIA 263 A+ P K +GE+ + W A + + G A P E+++RLI+ Sbjct: 50 AASDPSKAAGKGEAGDAVARWAAWIPRAAVGGAGP-----------------EQVLRLIS 92
Query: 262 GASSAPIAQYIYSPSTPLHSLDPRVKQAWLLVLVFLPSRSHISVRLGLVVFLSVITILFL 83 GA++ PI Q++ SP T LH++DPRVK WLL LV LP+RS+I +R GLV +L+++++ L Sbjct: 93 GAAATPICQFVDSPRTFLHAIDPRVKLVWLLALVVLPARSNIYLRFGLVAYLTLLSMWVL 152
Query: 82 PRRTWQDQLGRMA 44 P W+DQLGR+A Sbjct: 153 PNHIWKDQLGRVA 165
>tr|Q944H2|Q944H2_ARATH AT3g21580/MIL23_14 (Putative uncharacterized protein At3g21580/MIL23_14) OS=Arabidopsis thaliana GN=At3g21580/MIL23_14 PE=2 SV=1 Length = 391
Score = 92.0 bits (227), Expect = 1e-17 Identities = 43/81 (53%), Positives = 62/81 (76%) Frame = -3
Query: 286 EELMRLIAGASSAPIAQYIYSPSTPLHSLDPRVKQAWLLVLVFLPSRSHISVRLGLVVFL 107 E + RLI+ A+ +PI Q+I SP T LHS+DPR+K WLL LV LP+R+++ VRLGLV+ Sbjct: 87 ENVFRLISSATGSPIGQFISSPVTFLHSVDPRIKLVWLLTLVVLPARANLVVRLGLVLCT 146
Query: 106 SVITILFLPRRTWQDQLGRMA 44 ++++IL LPR+ W DQL R++ Sbjct: 147 ALLSILVLPRQVWIDQLARVS 167
>tr|A4S9Y7|A4S9Y7_OSTLU ABC(Membrane) family transporter: cobalt ion (Fragment) OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_4931 PE=4 SV=1 Length = 257
Score = 65.1 bits (157), Expect = 2e-09 Identities = 27/64 (42%), Positives = 40/64 (62%) Frame = -3
Query: 247 PIAQYIYSPSTPLHSLDPRVKQAWLLVLVFLPSRSHISVRLGLVVFLSVITILFLPRRTW 68 PI ++ SP++PLH +D RVKQAWL L+ LP+ + ++ L+ T+ LPRR W Sbjct: 1 PIGSFVSSPTSPLHRMDARVKQAWLAALLLLPASGSVDDKIATCALLTATTVAALPRRVW 60
Query: 67 QDQL 56 + QL Sbjct: 61 RPQL 64
>tr|P74129|P74129_SYNY3 Slr1978 protein OS=Synechocystis sp. (strain PCC 6803) GN=slr1978 PE=4 SV=1 Length = 291
Score = 63.2 bits (152), Expect = 6e-09 Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 1/72 (1%) Frame = -3
Query: 253 SAPIAQYIYSPSTPLHSLDPRVKQAWLLVLVFLPSRSHISVRLGLVVFLSVITI-LFLPR 77 S PI Y+ +P T LH LDPRVK AWL+ + P ++ RLG+V+FL ++T + +P Sbjct: 6 SLPIGLYLENPVTWLHRLDPRVKLAWLMSFLLAPVLANAIWRLGIVIFLILLTFAVRIPW 65
Query: 76 RTWQDQLGRMAF 41 R W+ Q+G + F Sbjct: 66 RVWKQQMGLLVF 77
>tr|Q00SK4|Q00SK4_OSTTA Homology to unknown gene OS=Ostreococcus tauri GN=Ot18g01630 PE=4 SV=1 Length = 1170
Score = 60.8 bits (146), Expect = 3e-08 Identities = 27/66 (40%), Positives = 41/66 (62%) Frame = -3
Query: 253 SAPIAQYIYSPSTPLHSLDPRVKQAWLLVLVFLPSRSHISVRLGLVVFLSVITILFLPRR 74 + PI ++ SP++PLH +D RVKQAWL L+ LP+ +L ++ +T+ LPRR Sbjct: 866 AVPIGSFVSSPTSPLHRMDARVKQAWLGALLVLPASGSSEDKLFTCSVVAAVTVAALPRR 925
Query: 73 TWQDQL 56 W+ QL Sbjct: 926 VWRPQL 931
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