BP920034
Clone id YMU001_000132_C08
Library
Length 429
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000132_C08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CCACCAACAGACAGGTGCCTACCTTACATTGGAGATTCGTCACCACGATATGTAAGCAAT
ACGTCTAAATACACTTGGCACAGCCAAGGCCATTATGTCAATGTGTACACCTATTCCTTT
AGGGGTCCCATACCAATGCATCCCAGTAGTGCTCTCCCCCTTTGTCTAAAATCCTAGACC
TAATATTCGAGAGGCTTCTGATTATTGAGTTGTCGATCTTCACTGCCAAATAGGAGCCTT
TGCCTTGCTTCCGACTATCGAAGCGCAATTCTTCGCAACAACCCACACACCCGTGGGTAG
CTTTCCTTACCCATTAGTCGCCGTGCTATTAAGCCAATCAACATATGCCATCACATTTTG
TCTTTCGTTGACGGGAGAAATTGCAACAAGACCACCTTTGATTACATCATCCAAGAGTCT
GATTTGCTT
■■Homology search results ■■ -
sp_hit_id Q5XD24
Definition sp|Q5XD24|Y554_STRP6 Uncharacterized protein M6_Spy0554 OS=Streptococcus pyogenes serotype M6
Align length 41
Score (bit) 32.0
E-value 1.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920034|Adiantum capillus-veneris mRNA, clone:
YMU001_000132_C08.
(429 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5XD24|Y554_STRP6 Uncharacterized protein M6_Spy0554 OS=Strep... 32 1.1
sp|P49955|SF3B1_YEAST U2 snRNP component HSH155 OS=Saccharomyces... 31 2.4
sp|Q13183|S13A2_HUMAN Solute carrier family 13 member 2 OS=Homo ... 30 3.1
sp|Q02505|MUC3A_HUMAN Mucin-3A OS=Homo sapiens GN=MUC3A PE=2 SV=2 30 3.1
sp|A1WAM6|COBQ_ACISJ Cobyric acid synthase OS=Acidovorax sp. (st... 29 7.1
sp|P39584|YWBA_BACSU Putative permease IIC component ywbA OS=Bac... 29 9.1
sp|Q3J517|PUR5_RHOS4 Phosphoribosylformylglycinamidine cyclo-lig... 29 9.3

>sp|Q5XD24|Y554_STRP6 Uncharacterized protein M6_Spy0554
OS=Streptococcus pyogenes serotype M6 GN=M6_Spy0554 PE=1
SV=1
Length = 232

Score = 32.0 bits (71), Expect = 1.1
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2

Query: 293 VGSFPYPLVAVLLSQSTYAITFCLSLTGEIATRPPLITSSK 415
+ SF PLVA+LL+ + Y F L L + PP+ S K
Sbjct: 61 IKSFEKPLVAILLTHTHYDHIFSLDLVRDAFDHPPVYVSEK 101


>sp|P49955|SF3B1_YEAST U2 snRNP component HSH155 OS=Saccharomyces
cerevisiae GN=HSH155 PE=1 SV=1
Length = 971

Score = 30.8 bits (68), Expect = 2.4
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Frame = +2

Query: 11 TGAYLTLEIRHHDM*AIRLNTLGTAKAIMSMCTPIPLGV------PYQCIPVVLSPFV*N 172
T ++ I HD+ LN L + + +CT + +G+ PY +PV+++ +
Sbjct: 749 TFGFIAEAIGPHDVLVALLNNLKVQERQLRVCTAVAIGIVAKVCGPYNVLPVIMNEYT-T 807

Query: 173 PRPNIR 190
P N++
Sbjct: 808 PETNVQ 813


>sp|Q13183|S13A2_HUMAN Solute carrier family 13 member 2 OS=Homo
sapiens GN=SLC13A2 PE=2 SV=1
Length = 592

Score = 30.4 bits (67), Expect = 3.1
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Frame = +2

Query: 233 GAFALLPTIE----AQFFATTHTPVGSFPYPLVAVLLSQSTYAITFCLSLTGEIATRPPL 400
G +AL E +++ TP+ S P P +A++LS T C S P+
Sbjct: 427 GGYALAKGSERSGLSEWLGNKLTPLQSVPAPAIAIILSLLVATFTECTSNVATTTIFLPI 486

Query: 401 ITSSKSLIC 427
+ S IC
Sbjct: 487 LASMAQAIC 495


>sp|Q02505|MUC3A_HUMAN Mucin-3A OS=Homo sapiens GN=MUC3A PE=2 SV=2
Length = 2541

Score = 30.4 bits (67), Expect = 3.1
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2

Query: 278 TTHTPVGSFPYPLVAV-LLSQSTYAITFCLSLTGEIATRPPLITSSKSL 421
T TP YP ++S ST IT+ S+TG ++T L +S SL
Sbjct: 425 TRSTPTSETTYPTSPTSIVSDSTTEITYSTSITGTLSTATTLPPTSSSL 473


>sp|A1WAM6|COBQ_ACISJ Cobyric acid synthase OS=Acidovorax sp.
(strain JS42) GN=cobQ PE=3 SV=1
Length = 493

Score = 29.3 bits (64), Expect = 7.1
Identities = 18/44 (40%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = -1

Query: 153 STTGMHW-YGTPKGIGVHIDIMALAVPSVFRRIAYISW*RISNV 25
+T M W +G P+ GV D+ + AV +V RIA +++ RISN+
Sbjct: 233 ATIPMQWNHGLPEEDGV-FDMRSTAVGAVHTRIAVVAYPRISNL 275


>sp|P39584|YWBA_BACSU Putative permease IIC component ywbA
OS=Bacillus subtilis GN=ywbA PE=3 SV=1
Length = 444

Score = 28.9 bits (63), Expect = 9.1
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2

Query: 23 LTLEIRHHDM*AIRLNTLGTAKAIMSMCTPIPLGVPYQCIPVVLSPFV*NP 175
LT+ +R +L LG A+ ++ PI G+P P+++ PF+ P
Sbjct: 309 LTMLVRSRSKQMKQLGRLGIGPALFNINEPIIFGMPIVMNPLLIVPFIIAP 359


>sp|Q3J517|PUR5_RHOS4 Phosphoribosylformylglycinamidine cyclo-ligase
OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 /
NCIB 8253 / DSM 158) GN=purM PE=3 SV=1
Length = 348

Score = 28.9 bits (63), Expect = 9.3
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1

Query: 123 PKGIGVHIDIMALAVPSVFRRIA 55
PKG+G ID+ A +P VFR +A
Sbjct: 264 PKGLGARIDLSAWELPPVFRWLA 286


tr_hit_id Q5DB40
Definition tr|Q5DB40|Q5DB40_SCHJA Putative uncharacterized protein OS=Schistosoma japonicum
Align length 50
Score (bit) 33.9
E-value 4.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920034|Adiantum capillus-veneris mRNA, clone:
YMU001_000132_C08.
(429 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q5DB40|Q5DB40_SCHJA Putative uncharacterized protein OS=Schis... 34 4.2
tr|Q5BZV4|Q5BZV4_SCHJA SJCHGC01027 protein (Fragment) OS=Schisto... 34 4.2
tr|Q4P6L1|Q4P6L1_USTMA Putative uncharacterized protein OS=Ustil... 34 4.2
tr|Q13PC9|Q13PC9_BURXL Putative uncharacterized protein OS=Burkh... 33 7.2

>tr|Q5DB40|Q5DB40_SCHJA Putative uncharacterized protein
OS=Schistosoma japonicum PE=2 SV=1
Length = 152

Score = 33.9 bits (76), Expect = 4.2
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1

Query: 1 PPTDRCLPYIGDSSPRYVSNTSKYTWHSQGHYVNVYTYSFRGPIPMHPSS 150
PPT P++GD+S + V+ S+ + H + YVN Y I H S+
Sbjct: 15 PPTPIRRPWLGDNSEQMVTGRSRSSGHKRSVYVNASIYPIPEMIRNHDSN 64


>tr|Q5BZV4|Q5BZV4_SCHJA SJCHGC01027 protein (Fragment)
OS=Schistosoma japonicum PE=2 SV=2
Length = 381

Score = 33.9 bits (76), Expect = 4.2
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1

Query: 1 PPTDRCLPYIGDSSPRYVSNTSKYTWHSQGHYVNVYTYSFRGPIPMHPSS 150
PPT P++GD+S + V+ S+ + H + YVN Y I H S+
Sbjct: 24 PPTPIRRPWLGDNSEQMVTGRSRSSGHKRSVYVNASIYPIPEMIRNHDSN 73


>tr|Q4P6L1|Q4P6L1_USTMA Putative uncharacterized protein OS=Ustilago
maydis GN=UM04252.1 PE=4 SV=1
Length = 3893

Score = 33.9 bits (76), Expect = 4.2
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2

Query: 275 ATTHTPVGSFPYPLVAVLLSQSTYAITFCLSLTGEIATRPP 397
AT H PVG PYP + LL S+ +++ LSL+ PP
Sbjct: 299 ATIHPPVGVSPYPKITDLLLHSSLSLSLSLSLSLSPIAFPP 339


>tr|Q13PC9|Q13PC9_BURXL Putative uncharacterized protein
OS=Burkholderia xenovorans (strain LB400) GN=Bxeno_B1092
PE=4 SV=1
Length = 187

Score = 33.1 bits (74), Expect = 7.2
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2

Query: 200 DY*VVDLHCQIGAFALLPTIEAQFFATTHTPVGSFPYPLVAVLLSQSTYAITFCLSLTGE 379
DY L C IGA A+ I F + TH G FP L A+L+ A+ F + T +
Sbjct: 38 DYYGGALMCLIGAGAVTQGITYNFGSLTHMGPGFFPTCLGAILI-----ALGFAIVCTAK 92

Query: 380 -IATRPPL 400
ATRPP+
Sbjct: 93 RPATRPPI 100