BP920035 |
Clone id |
YMU001_000132_C09 |
Library |
YMU01 |
Length |
413 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000132_C09. |
Accession |
BP920035 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
ATCCACCCAGCATGAACCTCACTATCATTGATTGTCCTCTTCCCTGCCAAACAGGGTGTA ACAAGTATCCCACAGCATGCAGCGGTGTGTGCATCATATTCCATCTGTCAACACACAAGT CCTTGATCTCTTGCATCCTTGCCGTATCAACACCTTGCATGTGTTGAACTTGCTCAACCA TGCAATCTGTAAGCTCATACACAAGCCCCATGGTGGCTCCTTCCCTATCAGCCAAACGAA GGATCTTTAAGATGGGGGCACAAATCTTCAAAATCAACTTGGCCTCTTGCCAAAAGGATG CATCAAATACAATGTCAGAGACCACTGTGGCCTTTACACTATTAGGAGGTCTTCATTCTC ACAAATTTTGGATCAATCATAAGCCTGCGCACACCTTGCATACATCTGTCATC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q83MZ5 |
Definition |
sp|Q83MZ5|LEPA_TROWT GTP-binding protein lepA OS=Tropheryma whipplei (strain Twist) |
Align length |
88 |
Score (bit) |
32.7 |
E-value |
0.58 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5BF00 |
Definition |
tr|A5BF00|A5BF00_VITVI Putative uncharacterized protein OS=Vitis vinifera |
Align length |
106 |
Score (bit) |
63.2 |
E-value |
6.0e-09 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920035|Adiantum capillus-veneris mRNA, clone: YMU001_000132_C09. (413 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5BF00|A5BF00_VITVI Putative uncharacterized protein OS=Vitis... 63 6e-09 tr|A5AYX3|A5AYX3_VITVI Putative uncharacterized protein OS=Vitis... 62 1e-08 tr|A5BVC8|A5BVC8_VITVI Putative uncharacterized protein OS=Vitis... 61 2e-08 tr|A5BFB8|A5BFB8_VITVI Putative uncharacterized protein OS=Vitis... 61 3e-08 tr|A5ALW2|A5ALW2_VITVI Putative uncharacterized protein OS=Vitis... 61 3e-08 tr|A7Q5G9|A7Q5G9_VITVI Chromosome undetermined scaffold_53, whol... 60 7e-08 tr|A5BXL1|A5BXL1_VITVI Putative uncharacterized protein OS=Vitis... 59 9e-08 tr|A7QJZ0|A7QJZ0_VITVI Chromosome undetermined scaffold_109, who... 59 1e-07 tr|A5C5L6|A5C5L6_VITVI Putative uncharacterized protein OS=Vitis... 59 2e-07 tr|A5B6K0|A5B6K0_VITVI Putative uncharacterized protein OS=Vitis... 58 2e-07 tr|A5B2A7|A5B2A7_VITVI Putative uncharacterized protein OS=Vitis... 58 2e-07 tr|A5BQ63|A5BQ63_VITVI Putative uncharacterized protein OS=Vitis... 58 3e-07 tr|A5B625|A5B625_VITVI Putative uncharacterized protein OS=Vitis... 58 3e-07 tr|Q9LDS0|Q9LDS0_ARATH Transposase-like protein (Putative unchar... 57 6e-07 tr|A5BJ34|A5BJ34_VITVI Putative uncharacterized protein OS=Vitis... 57 6e-07 tr|A7PAM2|A7PAM2_VITVI Chromosome chr14 scaffold_9, whole genome... 55 1e-06 tr|A7NYS1|A7NYS1_VITVI Chromosome chr6 scaffold_3, whole genome ... 55 1e-06 tr|A7QG01|A7QG01_VITVI Chromosome chr9 scaffold_90, whole genome... 55 2e-06 tr|A7NY53|A7NY53_VITVI Chromosome chr6 scaffold_3, whole genome ... 55 2e-06 tr|A5BAA6|A5BAA6_VITVI Putative uncharacterized protein OS=Vitis... 55 2e-06 tr|A5AYG3|A5AYG3_VITVI Putative uncharacterized protein OS=Vitis... 55 2e-06 tr|A3BRV8|A3BRV8_ORYSJ Putative uncharacterized protein OS=Oryza... 55 2e-06 tr|A7PQD9|A7PQD9_VITVI Chromosome chr18 scaffold_24, whole genom... 54 3e-06 tr|A5BCE9|A5BCE9_VITVI Putative uncharacterized protein OS=Vitis... 54 3e-06 tr|A7QZT9|A7QZT9_VITVI Chromosome undetermined scaffold_287, who... 54 4e-06 tr|A7P6V7|A7P6V7_VITVI Chromosome chr9 scaffold_7, whole genome ... 54 4e-06 tr|A7PR20|A7PR20_VITVI Chromosome chr6 scaffold_25, whole genome... 54 5e-06 tr|A7QKN8|A7QKN8_VITVI Chromosome chr2 scaffold_113, whole genom... 53 7e-06 tr|A5B3G6|A5B3G6_VITVI Putative uncharacterized protein OS=Vitis... 53 7e-06 tr|A5AEK8|A5AEK8_VITVI Putative uncharacterized protein OS=Vitis... 53 7e-06
>tr|A5BF00|A5BF00_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003006 PE=4 SV=1 Length = 635
Score = 63.2 bits (152), Expect = 6e-09 Identities = 34/106 (32%), Positives = 58/106 (54%) Frame = -2
Query: 322 VSDIVFDASFWQEAKLILKICAPILKILRLADREGATMGLVYELTDCMVEQVQHMQGVDT 143 V + +FW A +L+ P +++L D E + MG V+ +E V+ +GVD Sbjct: 373 VETAILGDNFWSRACSLLQFFEPFVRLLTTLDIEKSVMGDVFNWRVQALEAVKS-KGVDD 431
Query: 142 ARMQEIKDLCVDRWNMMHTPLHAVGYLLHPVWQGRGQSMIVRFMLG 5 + +++ L +W+M+ +PLHA GY+L+P + G+GQS M G Sbjct: 432 ILLNQLELLIESKWDMLFSPLHASGYILNPKYFGKGQSKDKTIMRG 477
>tr|A5AYX3|A5AYX3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005587 PE=4 SV=1 Length = 633
Score = 62.0 bits (149), Expect = 1e-08 Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 2/96 (2%) Frame = -2
Query: 334 KATVVSDIVFDASFWQEAKLILKICAPILKILRLADRE-GATMGLVYELTDCMVEQVQHM 158 K +++IV SFW LK+ +P++++LRL D E A MG +YE + + + Sbjct: 308 KGKTITNIVLMPSFWNTIVFCLKVSSPLVRVLRLVDGEKKAPMGYIYEAMNRAKDSIVRS 367
Query: 157 QGVDTARMQEIKDLCVDRWNM-MHTPLHAVGYLLHP 53 + + +EI ++ RW + +H PLHA GY L+P Sbjct: 368 FNGNEEKYKEILNIIDKRWEIQLHRPLHAAGYFLNP 403
>tr|A5BVC8|A5BVC8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018067 PE=4 SV=1 Length = 629
Score = 61.2 bits (147), Expect = 2e-08 Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 2/96 (2%) Frame = -2
Query: 334 KATVVSDIVFDASFWQEAKLILKICAPILKILRLADRE-GATMGLVYELTDCMVEQVQHM 158 K +++IV SFW LKI P++++LRL D E A MG +YE + + + Sbjct: 269 KGKTIANIVLMPSFWNTIVFCLKISGPLVRVLRLVDGEKKAPMGYIYEAMNRAKDAIVRS 328
Query: 157 QGVDTARMQEIKDLCVDRWNM-MHTPLHAVGYLLHP 53 + + +EI ++ RW + +H PLHA GY L+P Sbjct: 329 FNGNEEKYKEIFNIIDKRWEIQLHRPLHAAGYFLNP 364
>tr|A5BFB8|A5BFB8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020704 PE=4 SV=1 Length = 803
Score = 60.8 bits (146), Expect = 3e-08 Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 2/96 (2%) Frame = -2
Query: 334 KATVVSDIVFDASFWQEAKLILKICAPILKILRLADRE-GATMGLVYELTDCMVEQVQHM 158 K +++IV SFW LK+ P++++LRL D E A MG +YE + + + Sbjct: 443 KGKTIANIVLMPSFWNTIVFCLKVSGPLVRVLRLVDGEKKAPMGYIYEAMNRAKDAIVRS 502
Query: 157 QGVDTARMQEIKDLCVDRWNM-MHTPLHAVGYLLHP 53 + + +EI ++ RW + +H PLHA GY L+P Sbjct: 503 FNGNEEKYKEIFNIIDKRWEIQLHRPLHAAGYFLNP 538
>tr|A5ALW2|A5ALW2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000807 PE=4 SV=1 Length = 1137
Score = 60.8 bits (146), Expect = 3e-08 Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 2/96 (2%) Frame = -2
Query: 334 KATVVSDIVFDASFWQEAKLILKICAPILKILRLADRE-GATMGLVYELTDCMVEQVQHM 158 K +++IV SFW LK+ P++++LRL D E A MG +YE + + + Sbjct: 791 KGKTIANIVLMPSFWNTIVFCLKVSGPLVRVLRLVDGEKKAPMGYIYEAMNRAKDAIVRS 850
Query: 157 QGVDTARMQEIKDLCVDRWNM-MHTPLHAVGYLLHP 53 + + +EI ++ RW + +H PLHA GY L+P Sbjct: 851 FNGNEEKYKEIFNIIDKRWEIQLHRPLHAAGYFLNP 886
>tr|A7Q5G9|A7Q5G9_VITVI Chromosome undetermined scaffold_53, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00030936001 PE=4 SV=1 Length = 248
Score = 59.7 bits (143), Expect = 7e-08 Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 2/96 (2%) Frame = -2
Query: 334 KATVVSDIVFDASFWQEAKLILKICAPILKILRLADRE-GATMGLVYELTDCMVEQVQHM 158 K +++IV SFW LK+ P++ +LRL D E A MG +YE + + + Sbjct: 88 KGKTIANIVLMPSFWNTIVFCLKVSGPLVHVLRLVDGEKKAPMGYIYEAMNRAKDAIVRS 147
Query: 157 QGVDTARMQEIKDLCVDRWNM-MHTPLHAVGYLLHP 53 + + +EI ++ RW + +H PLHA GY L+P Sbjct: 148 FNGNEEKYKEIFNIIDKRWEIQLHRPLHAAGYFLNP 183
>tr|A5BXL1|A5BXL1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023184 PE=4 SV=1 Length = 728
Score = 59.3 bits (142), Expect = 9e-08 Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 3/98 (3%) Frame = -2
Query: 334 KATVVSDIVFDASFWQEAKLILKICAPILKILRLADRE-GATMGLVYELTDCMVEQVQHM 158 K VS+IV +SFW ILK+ P++K+L+L D E MG +Y+ D E ++ Sbjct: 432 KGKQVSEIVLMSSFWNHVVYILKVMGPLVKVLQLVDNERKPAMGYIYKAMDRCKETIKKS 491
Query: 157 QGVDTARMQEIKDLCVDRW--NMMHTPLHAVGYLLHPV 50 D + +EI + RW + H PLHAV L+ + Sbjct: 492 FNEDEDKYKEIFSIIDKRWECQLHHRPLHAVDRLVSDI 529
>tr|A7QJZ0|A7QJZ0_VITVI Chromosome undetermined scaffold_109, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00000858001 PE=4 SV=1 Length = 644
Score = 58.9 bits (141), Expect = 1e-07 Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 2/91 (2%) Frame = -2
Query: 319 SDIVFDASFWQEAKLILKICAPILKILRLAD-REGATMGLVYELTDCMVEQVQHMQGVDT 143 S ++FD +FW +K P++ +LR D E TMG +YEL D E++ G Sbjct: 290 STVLFDPNFWPHVAFCIKTTVPLVSVLREVDSEERPTMGYIYELMDSAKEKIAFNCGGME 349
Query: 142 ARMQEIKDLCVDRWN-MMHTPLHAVGYLLHP 53 + I RW +H PLHAVGY L+P Sbjct: 350 RKYGPIWRKIDARWTPQLHRPLHAVGYYLNP 380
>tr|A5C5L6|A5C5L6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011011 PE=4 SV=1 Length = 540
Score = 58.5 bits (140), Expect = 2e-07 Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 2/96 (2%) Frame = -2
Query: 334 KATVVSDIVFDASFWQEAKLILKICAPILKILRLADRE-GATMGLVYELTDCMVEQVQHM 158 K +++IV +SFW LK+ P++++LRL D E A M +YE + + + Sbjct: 183 KGKTIANIVLMSSFWNTIVFCLKVSGPLVRVLRLVDGEKKAPMEYIYEAMNRAKDTIVRS 242
Query: 157 QGVDTARMQEIKDLCVDRWNM-MHTPLHAVGYLLHP 53 + + +EI ++ RW + +H PLHA GY L+P Sbjct: 243 FNGNEEKYKEIFNIIDKRWEIQLHRPLHAAGYFLNP 278
>tr|A5B6K0|A5B6K0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031313 PE=4 SV=1 Length = 803
Score = 58.2 bits (139), Expect = 2e-07 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 2/95 (2%) Frame = -2
Query: 334 KATVVSDIVFDASFWQEAKLILKICAPILKILRLADRE-GATMGLVYELTDCMVEQVQHM 158 K +++IV SFW LK+ P++++LRL D E A MG +YE + + + Sbjct: 443 KGKTIANIVLMPSFWNTIVFCLKVSGPLVRVLRLVDGEKKAPMGYIYEAMNRAKDAIVRS 502
Query: 157 QGVDTARMQEIKDLCVDRWNM-MHTPLHAVGYLLH 56 + + +EI ++ RW + +H PLHA GY L+ Sbjct: 503 FNGNEEKYKEIFNIIDKRWEIQLHRPLHAAGYFLN 537
|