BP920038 |
Clone id |
YMU001_000132_C12 |
Library |
YMU01 |
Length |
569 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000132_C12. |
Accession |
BP920038 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3685Contig1 |
Sequence |
CCTCTCGTGTCGGCCATATTGTGAATGTTGATGTTGCACCTTTCTATGTAAACCTTGATT GGAGAGCAGAAACAAACACCCTTGATAAAGAAAAAACATCAAGAGACTCGCATATGTACA AACGTGCCCACCTGGTCCTTCCGCTCTCTTTAAGAAGCTTTTGCAGGTGACTACTGCTTT TGCAGGTGACTACTGCTTTTAAATTAGGTCACTTGTGATGTGACAATCGGAGTGCTACCC TTTGATTGCAGTAAGTTGCTGTTCATATGCATCACAATATGCACCAACTTCTTTGAAAGC CGCAATAAGCCTGGGAATAATCTTTGCAAGCATTAGCCTGAACCCAACAGTCGACTGCTC CATATCTTTGCCACTTGCAGCAGAAACAATGCCATCCTCTGCCAAGGAACCCACAGGAGC TCCTTGCATATACACAAGGCAAGCTCGAAGGATCAAAGGCCCCCGCTTTTTGAAATGTTC TTTCACAAATTCCTCAAAATGCAATGGTGGCCGCCGGAGAAGATAAGGCATGGACTTGCA GGACAGTAAGAATGAATTTTCTACATATG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9ZVX1 |
Definition |
sp|Q9ZVX1|UBC23_ARATH Probable ubiquitin carrier protein E2 23 OS=Arabidopsis thaliana |
Align length |
102 |
Score (bit) |
107.0 |
E-value |
3.0e-23 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9AWU5 |
Definition |
tr|Q9AWU5|Q9AWU5_ORYSJ P0044F08.17 protein OS=Oryza sativa subsp. japonica |
Align length |
102 |
Score (bit) |
117.0 |
E-value |
6.0e-25 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920038|Adiantum capillus-veneris mRNA, clone: YMU001_000132_C12. (569 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9AWU5|Q9AWU5_ORYSJ P0044F08.17 protein OS=Oryza sativa subsp... 117 6e-25 tr|Q5ZCB9|Q5ZCB9_ORYSJ Ubiquitin-conjugating enzyme-like (Os01g0... 117 6e-25 tr|A2ZNS8|A2ZNS8_ORYSJ Putative uncharacterized protein OS=Oryza... 117 6e-25 tr|A2WK64|A2WK64_ORYSI Putative uncharacterized protein OS=Oryza... 117 6e-25 tr|A7P8D5|A7P8D5_VITVI Chromosome chr3 scaffold_8, whole genome ... 107 5e-22 tr|A9SVT6|A9SVT6_PHYPA Predicted protein (Fragment) OS=Physcomit... 105 2e-21 tr|Q6I601|Q6I601_ORYSJ Putative uncharacterized protein OJ1214_E... 97 8e-19 tr|Q0DG18|Q0DG18_ORYSJ Os05g0557700 protein OS=Oryza sativa subs... 97 8e-19 tr|B8AWH8|B8AWH8_ORYSI Putative uncharacterized protein OS=Oryza... 97 8e-19 tr|B7F902|B7F902_ORYSJ cDNA, clone: J065202E18, full insert sequ... 97 8e-19 tr|A9SIU9|A9SIU9_PHYPA Predicted protein OS=Physcomitrella paten... 96 2e-18 tr|B2L1Z0|B2L1Z0_NICBE PHO2 OS=Nicotiana benthamiana PE=2 SV=1 93 1e-17 tr|A9P2M6|A9P2M6_PICSI Putative uncharacterized protein OS=Picea... 87 8e-16 tr|Q69LG5|Q69LG5_ORYSJ Os09g0294300 protein OS=Oryza sativa subs... 82 2e-14 tr|B8BE02|B8BE02_ORYSI Putative uncharacterized protein OS=Oryza... 82 2e-14 tr|A3BX19|A3BX19_ORYSJ Putative uncharacterized protein OS=Oryza... 82 2e-14 tr|Q6I602|Q6I602_ORYSJ Os05g0557600 protein OS=Oryza sativa subs... 82 2e-14 tr|A2Y7C1|A2Y7C1_ORYSI Putative uncharacterized protein OS=Oryza... 82 2e-14 tr|Q65XP5|Q65XP5_ORYSJ Putative ubiquitin-conjugating enzyme OS=... 72 2e-11 tr|A2Y0I3|A2Y0I3_ORYSI Putative uncharacterized protein OS=Oryza... 72 2e-11 tr|Q9C918|Q9C918_ARATH Putative ubiquitin-conjugating enzyme; 12... 70 8e-11 tr|B8A7K2|B8A7K2_ORYSI Putative uncharacterized protein OS=Oryza... 70 8e-11 tr|A2ZWI0|A2ZWI0_ORYSJ Putative uncharacterized protein OS=Oryza... 70 8e-11 tr|A7P1M3|A7P1M3_VITVI Chromosome chr19 scaffold_4, whole genome... 69 1e-10 tr|A7PJ43|A7PJ43_VITVI Chromosome chr12 scaffold_18, whole genom... 68 3e-10 tr|A5BM02|A5BM02_VITVI Putative uncharacterized protein OS=Vitis... 68 3e-10 tr|Q5NAY5|Q5NAY5_ORYSJ Ubiquitin-conjugating enzyme-like (Os01g0... 67 9e-10 tr|A2ZR04|A2ZR04_ORYSJ Putative uncharacterized protein OS=Oryza... 67 9e-10 tr|A2WMG0|A2WMG0_ORYSI Putative uncharacterized protein OS=Oryza... 67 9e-10 tr|A9PH42|A9PH42_POPTR Putative uncharacterized protein OS=Popul... 65 2e-09
>tr|Q9AWU5|Q9AWU5_ORYSJ P0044F08.17 protein OS=Oryza sativa subsp. japonica GN=P0044F08.17 PE=3 SV=1 Length = 1067
Score = 117 bits (292), Expect = 6e-25 Identities = 57/102 (55%), Positives = 73/102 (71%) Frame = -3
Query: 567 YVENSFLLSCKSMPYLLRRPPLHFEEFVKEHFKKRGPLILRACLVYMQGAPVGSLAEDGI 388 Y EN++LLS KSM Y+LRRPP+HFE+F K HF KRG IL+AC Y+QG VG+L +D Sbjct: 957 YNENTYLLSLKSMLYILRRPPMHFEDFAKSHFSKRGKYILKACEAYLQGNGVGTLTDDAC 1016
Query: 387 VSAASGKDMEQSTVGFRLMLAKIIPRLIAAFKEVGAYCDAYE 262 + S + + +VGF+L LAKI+PRLI A K+ GA CD YE Sbjct: 1017 TTERSKE--QPCSVGFKLALAKIMPRLITALKDAGANCDQYE 1056
>tr|Q5ZCB9|Q5ZCB9_ORYSJ Ubiquitin-conjugating enzyme-like (Os01g0125900 protein) OS=Oryza sativa subsp. japonica GN=P0037C04.36 PE=3 SV=1 Length = 1063
Score = 117 bits (292), Expect = 6e-25 Identities = 57/102 (55%), Positives = 73/102 (71%) Frame = -3
Query: 567 YVENSFLLSCKSMPYLLRRPPLHFEEFVKEHFKKRGPLILRACLVYMQGAPVGSLAEDGI 388 Y EN++LLS KSM Y+LRRPP+HFE+F K HF KRG IL+AC Y+QG VG+L +D Sbjct: 953 YNENTYLLSLKSMLYILRRPPMHFEDFAKSHFSKRGKYILKACEAYLQGNGVGTLTDDAC 1012
Query: 387 VSAASGKDMEQSTVGFRLMLAKIIPRLIAAFKEVGAYCDAYE 262 + S + + +VGF+L LAKI+PRLI A K+ GA CD YE Sbjct: 1013 TTERSKE--QPCSVGFKLALAKIMPRLITALKDAGANCDQYE 1052
>tr|A2ZNS8|A2ZNS8_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_000200 PE=3 SV=1 Length = 1056
Score = 117 bits (292), Expect = 6e-25 Identities = 57/102 (55%), Positives = 73/102 (71%) Frame = -3
Query: 567 YVENSFLLSCKSMPYLLRRPPLHFEEFVKEHFKKRGPLILRACLVYMQGAPVGSLAEDGI 388 Y EN++LLS KSM Y+LRRPP+HFE+F K HF KRG IL+AC Y+QG VG+L +D Sbjct: 946 YNENTYLLSLKSMLYILRRPPMHFEDFAKSHFSKRGKYILKACEAYLQGNGVGTLTDDAC 1005
Query: 387 VSAASGKDMEQSTVGFRLMLAKIIPRLIAAFKEVGAYCDAYE 262 + S + + +VGF+L LAKI+PRLI A K+ GA CD YE Sbjct: 1006 TTERSKE--QPCSVGFKLALAKIMPRLITALKDAGANCDQYE 1045
>tr|A2WK64|A2WK64_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_00213 PE=3 SV=1 Length = 1056
Score = 117 bits (292), Expect = 6e-25 Identities = 57/102 (55%), Positives = 73/102 (71%) Frame = -3
Query: 567 YVENSFLLSCKSMPYLLRRPPLHFEEFVKEHFKKRGPLILRACLVYMQGAPVGSLAEDGI 388 Y EN++LLS KSM Y+LRRPP+HFE+F K HF KRG IL+AC Y+QG VG+L +D Sbjct: 946 YNENTYLLSLKSMLYILRRPPMHFEDFAKSHFSKRGKYILKACEAYLQGNGVGTLTDDAC 1005
Query: 387 VSAASGKDMEQSTVGFRLMLAKIIPRLIAAFKEVGAYCDAYE 262 + S + + +VGF+L LAKI+PRLI A K+ GA CD YE Sbjct: 1006 TTERSKE--QPCSVGFKLALAKIMPRLITALKDAGANCDQYE 1045
>tr|A7P8D5|A7P8D5_VITVI Chromosome chr3 scaffold_8, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00036139001 PE=3 SV=1 Length = 967
Score = 107 bits (267), Expect = 5e-22 Identities = 52/102 (50%), Positives = 72/102 (70%) Frame = -3
Query: 567 YVENSFLLSCKSMPYLLRRPPLHFEEFVKEHFKKRGPLILRACLVYMQGAPVGSLAEDGI 388 Y EN+FLL+CK+M YL+R+PP FEE VK+HFK++G IL+AC YM+G +GSL++D Sbjct: 863 YNENTFLLNCKTMMYLMRKPPKDFEELVKDHFKRQGYYILKACDAYMKGYLIGSLSKD-- 920
Query: 387 VSAASGKDMEQSTVGFRLMLAKIIPRLIAAFKEVGAYCDAYE 262 S + + ++VGF+LML KI PRL A EVGA C ++ Sbjct: 921 ASTSDRSNTNSTSVGFKLMLTKIAPRLFLALNEVGADCQEFK 962
>tr|A9SVT6|A9SVT6_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_40312 PE=3 SV=1 Length = 950
Score = 105 bits (261), Expect = 2e-21 Identities = 51/102 (50%), Positives = 74/102 (72%), Gaps = 3/102 (2%) Frame = -3
Query: 567 YVENSFLLSCKSMPYLLRRPPLHFEEFVKEHFKKRGPLILRACLVYMQGAPVGSLAEDGI 388 Y ENSFLLS KSM YL+RRPP+HFE+ ++++FK +G +LR+C Y+QGAPVGSL E+ Sbjct: 848 YNENSFLLSLKSMLYLIRRPPMHFEDLIRKNFKLKGASLLRSCEAYLQGAPVGSLVENKN 907
Query: 387 VSAASGKDM---EQSTVGFRLMLAKIIPRLIAAFKEVGAYCD 271 S + ++ ++S+ GF+LML K++ +L AFKE+G D Sbjct: 908 TSTLADTELVGADKSSAGFKLMLKKLVVKLEEAFKELGVEYD 949
>tr|Q6I601|Q6I601_ORYSJ Putative uncharacterized protein OJ1214_E03.18 (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=OJ1214_E03.18 PE=3 SV=1 Length = 993
Score = 96.7 bits (239), Expect = 8e-19 Identities = 48/98 (48%), Positives = 62/98 (63%) Frame = -3
Query: 567 YVENSFLLSCKSMPYLLRRPPLHFEEFVKEHFKKRGPLILRACLVYMQGAPVGSLAEDGI 388 Y EN+FLLSCKSM Y+L +PP HFE FVKEHF P IL AC Y+ G VG + Sbjct: 897 YNENAFLLSCKSMTYILHKPPKHFENFVKEHFTCCAPHILDACKAYLGGDLVGHARDSAY 956
Query: 387 VSAASGKDMEQSTVGFRLMLAKIIPRLIAAFKEVGAYC 274 +S K+ S+ GF++MLAK++P+L+ F E G C Sbjct: 957 ISDDGCKN---SSTGFKIMLAKLLPKLVTTFSEAGIPC 991
>tr|Q0DG18|Q0DG18_ORYSJ Os05g0557700 protein OS=Oryza sativa subsp. japonica GN=Os05g0557700 PE=3 SV=1 Length = 1029
Score = 96.7 bits (239), Expect = 8e-19 Identities = 48/98 (48%), Positives = 62/98 (63%) Frame = -3
Query: 567 YVENSFLLSCKSMPYLLRRPPLHFEEFVKEHFKKRGPLILRACLVYMQGAPVGSLAEDGI 388 Y EN+FLLSCKSM Y+L +PP HFE FVKEHF P IL AC Y+ G VG + Sbjct: 933 YNENAFLLSCKSMTYILHKPPKHFENFVKEHFTCCAPHILDACKAYLGGDLVGHARDSAY 992
Query: 387 VSAASGKDMEQSTVGFRLMLAKIIPRLIAAFKEVGAYC 274 +S K+ S+ GF++MLAK++P+L+ F E G C Sbjct: 993 ISDDGCKN---SSTGFKIMLAKLLPKLVTTFSEAGIPC 1027
>tr|B8AWH8|B8AWH8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_20940 PE=4 SV=1 Length = 876
Score = 96.7 bits (239), Expect = 8e-19 Identities = 48/98 (48%), Positives = 62/98 (63%) Frame = -3
Query: 567 YVENSFLLSCKSMPYLLRRPPLHFEEFVKEHFKKRGPLILRACLVYMQGAPVGSLAEDGI 388 Y EN+FLLSCKSM Y+L +PP HFE FVKEHF P IL AC Y+ G VG + Sbjct: 780 YNENAFLLSCKSMTYILHKPPKHFENFVKEHFTCCAPHILDACKAYLGGDLVGHARDSAY 839
Query: 387 VSAASGKDMEQSTVGFRLMLAKIIPRLIAAFKEVGAYC 274 +S K+ S+ GF++MLAK++P+L+ F E G C Sbjct: 840 ISDDGCKN---SSTGFKIMLAKLLPKLVTTFSEAGIPC 874
>tr|B7F902|B7F902_ORYSJ cDNA, clone: J065202E18, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 876
Score = 96.7 bits (239), Expect = 8e-19 Identities = 48/98 (48%), Positives = 62/98 (63%) Frame = -3
Query: 567 YVENSFLLSCKSMPYLLRRPPLHFEEFVKEHFKKRGPLILRACLVYMQGAPVGSLAEDGI 388 Y EN+FLLSCKSM Y+L +PP HFE FVKEHF P IL AC Y+ G VG + Sbjct: 780 YNENAFLLSCKSMTYILHKPPKHFENFVKEHFTCCAPHILDACKAYLGGDLVGHARDSAY 839
Query: 387 VSAASGKDMEQSTVGFRLMLAKIIPRLIAAFKEVGAYC 274 +S K+ S+ GF++MLAK++P+L+ F E G C Sbjct: 840 ISDDGCKN---SSTGFKIMLAKLLPKLVTTFSEAGIPC 874
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