BP920053
Clone id YMU001_000132_E04
Library
Length 141
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000132_E04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
ATGAGATATTACCTGCAGGTACTCATTCGATTCTCTTACCTTGGCAGGCAAGCGAGTGGC
CAAAGGCCCACAAAAGGCCAAGCTTTACCGCCATCTTGGAGGTAATACACCTAAAGCACA
ATGGGTTGTTGCGGACAAAGC
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920053|Adiantum capillus-veneris mRNA, clone:
YMU001_000132_E04.
(141 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id Q9LJK5
Definition tr|Q9LJK5|Q9LJK5_ARATH Dem protein OS=Arabidopsis thaliana
Align length 20
Score (bit) 43.5
E-value 0.005
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920053|Adiantum capillus-veneris mRNA, clone:
YMU001_000132_E04.
(141 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9LJK5|Q9LJK5_ARATH Dem protein OS=Arabidopsis thaliana GN=At... 44 0.005
tr|A7NTV6|A7NTV6_VITVI Chromosome chr18 scaffold_1, whole genome... 38 0.22
tr|A5AH24|A5AH24_VITVI Putative uncharacterized protein OS=Vitis... 38 0.22
tr|Q6VVW8|Q6VVW8_SOLLC DEM2 OS=Solanum lycopersicum GN=Dem2 PE=4... 38 0.28
tr|Q6VVW7|Q6VVW7_SOLLC DEM2 OS=Solanum lycopersicum GN=Dem2 PE=2... 38 0.28
tr|B7FFC8|B7FFC8_MEDTR Putative uncharacterized protein (Fragmen... 37 0.63
tr|Q9SZB7|Q9SZB7_ARATH Dem-like protein OS=Arabidopsis thaliana ... 36 0.82
tr|O04394|O04394_SOLLC Dem protein OS=Solanum lycopersicum GN=de... 35 2.4
tr|B6UCN7|B6UCN7_MAIZE Protein CYPRO4 OS=Zea mays PE=2 SV=1 34 3.1
tr|Q6ETM2|Q6ETM2_ORYSJ Os02g0178500 protein OS=Oryza sativa subs... 34 4.1
tr|B6UDP8|B6UDP8_MAIZE Protein CYPRO4 OS=Zea mays PE=2 SV=1 34 4.1
tr|B6UBL0|B6UBL0_MAIZE Protein CYPRO4 OS=Zea mays PE=2 SV=1 34 4.1
tr|A9TTW4|A9TTW4_PHYPA Predicted protein OS=Physcomitrella paten... 34 4.1

>tr|Q9LJK5|Q9LJK5_ARATH Dem protein OS=Arabidopsis thaliana
GN=At3g19240 PE=4 SV=1
Length = 648

Score = 43.5 bits (101), Expect = 0.005
Identities = 16/20 (80%), Positives = 20/20 (100%)
Frame = +2

Query: 80 KLYRHLGGNTPKAQWVVADK 139
KLYRH+GGNTPKA+W+V+DK
Sbjct: 90 KLYRHIGGNTPKAKWIVSDK 109


>tr|A7NTV6|A7NTV6_VITVI Chromosome chr18 scaffold_1, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00014814001
PE=4 SV=1
Length = 632

Score = 38.1 bits (87), Expect = 0.22
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +2

Query: 68 PQKAKLYRHLGGNTPKAQWVVADK 139
P KLY ++GGNTPKA+WV ++K
Sbjct: 70 PNAVKLYLYIGGNTPKAKWVTSEK 93


>tr|A5AH24|A5AH24_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_043502 PE=4 SV=1
Length = 632

Score = 38.1 bits (87), Expect = 0.22
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +2

Query: 68 PQKAKLYRHLGGNTPKAQWVVADK 139
P KLY ++GGNTPKA+WV ++K
Sbjct: 70 PNAVKLYLYIGGNTPKAKWVTSEK 93


>tr|Q6VVW8|Q6VVW8_SOLLC DEM2 OS=Solanum lycopersicum GN=Dem2 PE=4
SV=1
Length = 639

Score = 37.7 bits (86), Expect = 0.28
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = +2

Query: 80 KLYRHLGGNTPKAQWVVADK 139
KLY H+GGNTPKA+W+++ K
Sbjct: 81 KLYLHVGGNTPKAKWIISQK 100


>tr|Q6VVW7|Q6VVW7_SOLLC DEM2 OS=Solanum lycopersicum GN=Dem2 PE=2
SV=1
Length = 639

Score = 37.7 bits (86), Expect = 0.28
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = +2

Query: 80 KLYRHLGGNTPKAQWVVADK 139
KLY H+GGNTPKA+W+++ K
Sbjct: 81 KLYLHVGGNTPKAKWIISQK 100


>tr|B7FFC8|B7FFC8_MEDTR Putative uncharacterized protein (Fragment)
OS=Medicago truncatula PE=2 SV=1
Length = 237

Score = 36.6 bits (83), Expect = 0.63
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +2

Query: 62 KGPQKAKLYRHLGGNTPKAQWVVADK 139
+ P KL+ H+GGN+P A+WV+++K
Sbjct: 66 QNPNAVKLHLHIGGNSPNAKWVISEK 91


>tr|Q9SZB7|Q9SZB7_ARATH Dem-like protein OS=Arabidopsis thaliana
GN=F17M5.160 PE=2 SV=1
Length = 645

Score = 36.2 bits (82), Expect = 0.82
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +2

Query: 77 AKLYRHLGGNTPKAQWVVADK 139
A+L+R++ GNTPKA+WV A+K
Sbjct: 90 ARLFRYINGNTPKAKWVTAEK 110


>tr|O04394|O04394_SOLLC Dem protein OS=Solanum lycopersicum GN=dem
PE=2 SV=1
Length = 644

Score = 34.7 bits (78), Expect = 2.4
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2

Query: 80 KLYRHLGGNTPKAQWVVADK 139
KLY H+GGNT ++WVV+DK
Sbjct: 87 KLYLHVGGNTANSKWVVSDK 106


>tr|B6UCN7|B6UCN7_MAIZE Protein CYPRO4 OS=Zea mays PE=2 SV=1
Length = 655

Score = 34.3 bits (77), Expect = 3.1
Identities = 11/20 (55%), Positives = 18/20 (90%)
Frame = +2

Query: 80 KLYRHLGGNTPKAQWVVADK 139
KLY H+GG++P A+W+V+D+
Sbjct: 95 KLYLHIGGSSPSAKWIVSDR 114


>tr|Q6ETM2|Q6ETM2_ORYSJ Os02g0178500 protein OS=Oryza sativa subsp.
japonica GN=P0544B02.5 PE=2 SV=1
Length = 649

Score = 33.9 bits (76), Expect = 4.1
Identities = 10/20 (50%), Positives = 18/20 (90%)
Frame = +2

Query: 80 KLYRHLGGNTPKAQWVVADK 139
KLY H+GG++P A+W+++D+
Sbjct: 96 KLYLHIGGSSPSARWIISDR 115