BP920059 |
Clone id |
YMU001_000132_E10 |
Library |
YMU01 |
Length |
367 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000132_E10. |
Accession |
BP920059 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TTTAGATGACCAAACTTTTGAAAACATGGCTTCTTTTCAGCTAGATACTTATGAAAATGG GTGCTCAATTATGAGCTGCTCATTCACAGATGACAACAATGTTTACTACTGTGTGGGGAC TGCCTATGCCATTCCTGAGGAGAGTGAGCCCACCAAGGGCCGCATTCTTGTGTTCCTTGT GGAGGATGGAAAGCTACAATTGATTGCTGAGAAAGAGACTAAAGGTGCTGTTTACAACTT AAATGCATTTAATGGAAAGCTCTTAGCAGGCATCAATCATAAAATTCACTTGTACAAGTG GACACTGCGAGAGGATGGTACAAGAGAGCTTCAATCTGAGTGTGGCCATCATGGACATAT ACTTGCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9M0V3 |
Definition |
sp|Q9M0V3|DDB1A_ARATH DNA damage-binding protein 1a OS=Arabidopsis thaliana |
Align length |
122 |
Score (bit) |
216.0 |
E-value |
2.0e-56 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B3H6I9 |
Definition |
tr|B3H6I9|B3H6I9_ARATH Uncharacterized protein At4g05420.2 OS=Arabidopsis thaliana |
Align length |
122 |
Score (bit) |
216.0 |
E-value |
3.0e-55 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920059|Adiantum capillus-veneris mRNA, clone: YMU001_000132_E10. (367 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B3H6I9|B3H6I9_ARATH Uncharacterized protein At4g05420.2 OS=Ar... 216 3e-55 tr|A7Q1B3|A7Q1B3_VITVI Chromosome chr10 scaffold_43, whole genom... 214 2e-54 tr|A9U358|A9U358_PHYPA Predicted protein OS=Physcomitrella paten... 213 5e-54 tr|Q9FS08|Q9FS08_ORYSJ UV-damaged DNA binding protein OS=Oryza s... 211 1e-53 tr|Q6L4S0|Q6L4S0_ORYSJ Os05g0592400 protein OS=Oryza sativa subs... 211 1e-53 tr|B8AXJ2|B8AXJ2_ORYSI Putative uncharacterized protein OS=Oryza... 211 1e-53 tr|A3B7E1|A3B7E1_ORYSJ Putative uncharacterized protein OS=Oryza... 211 1e-53 tr|B7ZY61|B7ZY61_MAIZE Putative uncharacterized protein OS=Zea m... 205 8e-52 tr|A9TCE5|A9TCE5_PHYPA Predicted protein OS=Physcomitrella paten... 203 3e-51 tr|Q00ZH9|Q00ZH9_OSTTA Putative UV-damaged DNA binding factor (I... 147 3e-34 tr|A4S467|A4S467_OSTLU Predicted protein OS=Ostreococcus lucimar... 147 3e-34 tr|A7S0J1|A7S0J1_NEMVE Predicted protein OS=Nematostella vectens... 125 1e-27 tr|Q91YC8|Q91YC8_MOUSE Damaged-DNA recognition protein 1 OS=Mus ... 122 1e-26 tr|B7Z2A1|B7Z2A1_HUMAN cDNA FLJ56068, highly similar to DNA dama... 122 1e-26 tr|B4DZP5|B4DZP5_HUMAN cDNA FLJ51165, highly similar to DNA dama... 122 1e-26 tr|B4DSA8|B4DSA8_HUMAN cDNA FLJ51067, highly similar to DNA dama... 122 1e-26 tr|B4DG00|B4DG00_HUMAN cDNA FLJ52436, highly similar to DNA dama... 122 1e-26 tr|Q3ULS8|Q3ULS8_MOUSE Putative uncharacterized protein (Fragmen... 121 2e-26 tr|B6NP50|B6NP50_BRAFL Putative uncharacterized protein OS=Branc... 121 2e-26 tr|B6MGX7|B6MGX7_BRAFL Putative uncharacterized protein OS=Branc... 121 2e-26 tr|B7PIF3|B7PIF3_IXOSC DNA repair protein xp-E, putative OS=Ixod... 113 4e-24 tr|Q6PGT6|Q6PGT6_DANRE Zgc:63840 OS=Danio rerio GN=zgc:63840 PE=... 106 5e-22 tr|B3RLC6|B3RLC6_TRIAD Putative uncharacterized protein OS=Trich... 104 3e-21 tr|Q17I87|Q17I87_AEDAE DNA repair protein xp-e OS=Aedes aegypti ... 102 1e-20 tr|Q17I86|Q17I86_AEDAE DNA repair protein xp-e OS=Aedes aegypti ... 102 1e-20 tr|Q7QC66|Q7QC66_ANOGA AGAP002472-PA OS=Anopheles gambiae GN=AGA... 101 2e-20 tr|B0X4E5|B0X4E5_CULQU Putative uncharacterized protein OS=Culex... 98 2e-19 tr|Q299R6|Q299R6_DROPS GA20574 OS=Drosophila pseudoobscura pseud... 94 3e-18 tr|B4R1W6|B4R1W6_DROSI GD18880 OS=Drosophila simulans GN=GD18880... 94 3e-18 tr|B4HGB4|B4HGB4_DROSE GM24084 OS=Drosophila sechellia GN=GM2408... 94 3e-18
>tr|B3H6I9|B3H6I9_ARATH Uncharacterized protein At4g05420.2 OS=Arabidopsis thaliana GN=At4g05420 PE=4 SV=1 Length = 1067
Score = 216 bits (551), Expect = 3e-55 Identities = 100/122 (81%), Positives = 113/122 (92%) Frame = +2
Query: 2 LDDQTFENMASFQLDTYENGCSIMSCSFTDDNNVYYCVGTAYAIPEESEPTKGRILVFLV 181 LDDQTFE M+++ LD++E GCSI+SCSFT+D NVYYCVGTAY +PEE+EPTKGRILVF+V Sbjct: 728 LDDQTFEFMSTYPLDSFEYGCSILSCSFTEDKNVYYCVGTAYVLPEENEPTKGRILVFIV 787
Query: 182 EDGKLQLIAEKETKGAVYNLNAFNGKLLAGINHKIHLYKWTLREDGTRELQSECGHHGHI 361 EDG+LQLIAEKETKGAVY+LNAFNGKLLA IN KI LYKW LR+DGTRELQSECGHHGHI Sbjct: 788 EDGRLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSECGHHGHI 847
Query: 362 LA 367 LA Sbjct: 848 LA 849
>tr|A7Q1B3|A7Q1B3_VITVI Chromosome chr10 scaffold_43, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028385001 PE=4 SV=1 Length = 1089
Score = 214 bits (545), Expect = 2e-54 Identities = 100/122 (81%), Positives = 113/122 (92%) Frame = +2
Query: 2 LDDQTFENMASFQLDTYENGCSIMSCSFTDDNNVYYCVGTAYAIPEESEPTKGRILVFLV 181 LDDQTFE ++++ LDT+E GCSI+SCSF+DD+NVYYCVGTAY +PEE+EPTKGRILVF+V Sbjct: 750 LDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTAYVLPEENEPTKGRILVFIV 809
Query: 182 EDGKLQLIAEKETKGAVYNLNAFNGKLLAGINHKIHLYKWTLREDGTRELQSECGHHGHI 361 EDGKLQLIAEKETKGAVY+LNAFNGKLLA IN KI LYKW LR+DGTRELQSE GHHGHI Sbjct: 810 EDGKLQLIAEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLRDDGTRELQSESGHHGHI 869
Query: 362 LA 367 LA Sbjct: 870 LA 871
>tr|A9U358|A9U358_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_101177 PE=4 SV=1 Length = 1090
Score = 213 bits (541), Expect = 5e-54 Identities = 99/122 (81%), Positives = 111/122 (90%) Frame = +2
Query: 2 LDDQTFENMASFQLDTYENGCSIMSCSFTDDNNVYYCVGTAYAIPEESEPTKGRILVFLV 181 ++DQTFE ++ F LD YENGCSI++CSFTDD+NVYYCVGTAYA+PEESEP+KGRILVF V Sbjct: 751 IEDQTFEIISGFPLDPYENGCSIITCSFTDDSNVYYCVGTAYALPEESEPSKGRILVFSV 810
Query: 182 EDGKLQLIAEKETKGAVYNLNAFNGKLLAGINHKIHLYKWTLREDGTRELQSECGHHGHI 361 EDGK+QL+AEKE KGAVYNLNAFNGKLLAGIN KI LYKWTLR+DGTRELQ E HHGHI Sbjct: 811 EDGKIQLVAEKEVKGAVYNLNAFNGKLLAGINQKIALYKWTLRDDGTRELQYESSHHGHI 870
Query: 362 LA 367 LA Sbjct: 871 LA 872
>tr|Q9FS08|Q9FS08_ORYSJ UV-damaged DNA binding protein OS=Oryza sativa subsp. japonica GN=OsUV-DDB PE=2 SV=1 Length = 1090
Score = 211 bits (537), Expect = 1e-53 Identities = 98/122 (80%), Positives = 110/122 (90%) Frame = +2
Query: 2 LDDQTFENMASFQLDTYENGCSIMSCSFTDDNNVYYCVGTAYAIPEESEPTKGRILVFLV 181 LD QTFE ++ +QLD YE+GCSI+SCSF+DDNNVYYCVGTAY +PEE+EP+KGRILVF V Sbjct: 751 LDHQTFEFLSIYQLDQYEHGCSIISCSFSDDNNVYYCVGTAYVLPEENEPSKGRILVFAV 810
Query: 182 EDGKLQLIAEKETKGAVYNLNAFNGKLLAGINHKIHLYKWTLREDGTRELQSECGHHGHI 361 EDG+LQLI EKETKGAVY+LNAFNGKLLA IN KI LYKW LREDG+ ELQSECGHHGHI Sbjct: 811 EDGRLQLIVEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLREDGSHELQSECGHHGHI 870
Query: 362 LA 367 LA Sbjct: 871 LA 872
>tr|Q6L4S0|Q6L4S0_ORYSJ Os05g0592400 protein OS=Oryza sativa subsp. japonica GN=P0663C08.8 PE=2 SV=1 Length = 1090
Score = 211 bits (537), Expect = 1e-53 Identities = 98/122 (80%), Positives = 110/122 (90%) Frame = +2
Query: 2 LDDQTFENMASFQLDTYENGCSIMSCSFTDDNNVYYCVGTAYAIPEESEPTKGRILVFLV 181 LD QTFE ++ +QLD YE+GCSI+SCSF+DDNNVYYCVGTAY +PEE+EP+KGRILVF V Sbjct: 751 LDHQTFEFLSIYQLDQYEHGCSIISCSFSDDNNVYYCVGTAYVLPEENEPSKGRILVFAV 810
Query: 182 EDGKLQLIAEKETKGAVYNLNAFNGKLLAGINHKIHLYKWTLREDGTRELQSECGHHGHI 361 EDG+LQLI EKETKGAVY+LNAFNGKLLA IN KI LYKW LREDG+ ELQSECGHHGHI Sbjct: 811 EDGRLQLIVEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLREDGSHELQSECGHHGHI 870
Query: 362 LA 367 LA Sbjct: 871 LA 872
>tr|B8AXJ2|B8AXJ2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_21216 PE=4 SV=1 Length = 1089
Score = 211 bits (537), Expect = 1e-53 Identities = 98/122 (80%), Positives = 110/122 (90%) Frame = +2
Query: 2 LDDQTFENMASFQLDTYENGCSIMSCSFTDDNNVYYCVGTAYAIPEESEPTKGRILVFLV 181 LD QTFE ++ +QLD YE+GCSI+SCSF+DDNNVYYCVGTAY +PEE+EP+KGRILVF V Sbjct: 750 LDHQTFEFLSIYQLDQYEHGCSIISCSFSDDNNVYYCVGTAYVLPEENEPSKGRILVFAV 809
Query: 182 EDGKLQLIAEKETKGAVYNLNAFNGKLLAGINHKIHLYKWTLREDGTRELQSECGHHGHI 361 EDG+LQLI EKETKGAVY+LNAFNGKLLA IN KI LYKW LREDG+ ELQSECGHHGHI Sbjct: 810 EDGRLQLIVEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLREDGSHELQSECGHHGHI 869
Query: 362 LA 367 LA Sbjct: 870 LA 871
>tr|A3B7E1|A3B7E1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_018963 PE=4 SV=1 Length = 2046
Score = 211 bits (537), Expect = 1e-53 Identities = 98/122 (80%), Positives = 110/122 (90%) Frame = +2
Query: 2 LDDQTFENMASFQLDTYENGCSIMSCSFTDDNNVYYCVGTAYAIPEESEPTKGRILVFLV 181 LD QTFE ++ +QLD YE+GCSI+SCSF+DDNNVYYCVGTAY +PEE+EP+KGRILVF V Sbjct: 970 LDHQTFEFLSIYQLDQYEHGCSIISCSFSDDNNVYYCVGTAYVLPEENEPSKGRILVFAV 1029
Query: 182 EDGKLQLIAEKETKGAVYNLNAFNGKLLAGINHKIHLYKWTLREDGTRELQSECGHHGHI 361 EDG+LQLI EKETKGAVY+LNAFNGKLLA IN KI LYKW LREDG+ ELQSECGHHGHI Sbjct: 1030 EDGRLQLIVEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMLREDGSHELQSECGHHGHI 1089
Query: 362 LA 367 LA Sbjct: 1090 LA 1091
>tr|B7ZY61|B7ZY61_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 416
Score = 205 bits (522), Expect = 8e-52 Identities = 97/122 (79%), Positives = 105/122 (86%) Frame = +2
Query: 2 LDDQTFENMASFQLDTYENGCSIMSCSFTDDNNVYYCVGTAYAIPEESEPTKGRILVFLV 181 LD QTFE++ + LD YE GCSI+SCSF DD+NVYYCVGTAY IPEE+EPTKGRILVF V Sbjct: 77 LDHQTFESLCVYPLDQYECGCSIISCSFADDSNVYYCVGTAYVIPEENEPTKGRILVFAV 136
Query: 182 EDGKLQLIAEKETKGAVYNLNAFNGKLLAGINHKIHLYKWTLREDGTRELQSECGHHGHI 361 EDG LQLI EKETKGAVY+LNAFNGKLLA IN KI LYKW REDG+ ELQSECGHHGHI Sbjct: 137 EDGSLQLIVEKETKGAVYSLNAFNGKLLAAINQKIQLYKWMSREDGSHELQSECGHHGHI 196
Query: 362 LA 367 LA Sbjct: 197 LA 198
>tr|A9TCE5|A9TCE5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_220946 PE=4 SV=1 Length = 1089
Score = 203 bits (517), Expect = 3e-51 Identities = 99/122 (81%), Positives = 108/122 (88%) Frame = +2
Query: 2 LDDQTFENMASFQLDTYENGCSIMSCSFTDDNNVYYCVGTAYAIPEESEPTKGRILVFLV 181 ++DQTFE + F LD YE GCSI++CSFTDD+NVYYCVGTAYA+PEESEPTKGRILVFLV Sbjct: 751 IEDQTFEITSGFALDLYEIGCSIITCSFTDDSNVYYCVGTAYALPEESEPTKGRILVFLV 810
Query: 182 EDGKLQLIAEKETKGAVYNLNAFNGKLLAGINHKIHLYKWTLREDGTRELQSECGHHGHI 361 EDGKLQL+AEKE KGAVYNLNAFNGKLLAGIN KI LYKWTLR DGTR L+ E HHGHI Sbjct: 811 EDGKLQLVAEKEMKGAVYNLNAFNGKLLAGINQKIALYKWTLR-DGTRVLEIESSHHGHI 869
Query: 362 LA 367 LA Sbjct: 870 LA 871
>tr|Q00ZH9|Q00ZH9_OSTTA Putative UV-damaged DNA binding factor (ISS) OS=Ostreococcus tauri GN=Ot10g03450 PE=4 SV=1 Length = 1282
Score = 147 bits (371), Expect = 3e-34 Identities = 69/121 (57%), Positives = 88/121 (72%) Frame = +2
Query: 2 LDDQTFENMASFQLDTYENGCSIMSCSFTDDNNVYYCVGTAYAIPEESEPTKGRILVFLV 181 +DD +FE ++ FQL+ E S+ SC+F D+ YY VGT A+ E EP++GRILVF V Sbjct: 938 VDDGSFETLSQFQLEDQELTSSLTSCTFAGDSTTYYVVGTGIALETEDEPSRGRILVFKV 997
Query: 182 EDGKLQLIAEKETKGAVYNLNAFNGKLLAGINHKIHLYKWTLREDGTRELQSECGHHGHI 361 +D +L L++EKE +GAVYNLNAF GKLLAGIN K+ L+KWT RED EL SEC HHG I Sbjct: 998 DDDQLVLVSEKEVRGAVYNLNAFKGKLLAGINSKLELFKWTPREDEVHELVSECSHHGQI 1057
Query: 362 L 364 + Sbjct: 1058 V 1058
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