| BP920075 |
| Clone id |
YMU001_000132_G02 |
| Library |
YMU01 |
| Length |
502 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000132_G02. |
| Accession |
BP920075 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
- |
| Sequence |
GGCAGAACTGGCCATGGAAGCAGAGAAGAAGAAGAATGGGGATGTTTTGTCTGGGCTTCA
ACAGGAGCTTGCTTTTCTGAGAGAGGAGGATAAGAGGCAGAGAACCATCATTTTCGACAG
AGCCGAGGAGAAGAGGGAGGCCATAAGGCAGCTGTGTGCCACGCTCGACTATATGCAGAC
CAAGAACAGGCGGTTGGAGGGAGTGATCAATTCTGTGAGAGACAAAATCCAGAGGAGGAT
TGCAGCTTCAGGCACTAGGAGGAGCTGAGCTCTCCAGAGCACAAGAAGAATGGCAAGTGT
TAATGGCTCCCCTTTCCTTTTCATTGTGTACATTCTGATGCTTTATTTGTATGAGTAGCC
CTAGCTAATTGGCCCTAATAAAATTAGAAATCAATGTATAGGGTGTACAAGCTATTGATT
TGTTCTTTAATTTTTTAGACGTAAAATGGGGATGCTATGTAAGAGTTAAAAAAAGAAGGG
CAAAAGTCTGTAGGAGCTCTCC |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q0U6Z7 |
| Definition |
sp|Q0U6Z7|MED7_PHANO Mediator of RNA polymerase II transcription subunit 7 OS=Phaeosphaeria nodorum |
| Align length |
50 |
| Score (bit) |
35.0 |
| E-value |
0.2 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
Q9SG93 |
| Definition |
tr|Q9SG93|Q9SG93_ARATH T7M13.4 protein OS=Arabidopsis thaliana |
| Align length |
56 |
| Score (bit) |
46.6 |
| E-value |
0.0007 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920075|Adiantum capillus-veneris mRNA, clone:
YMU001_000132_G02.
(502 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|Q9SG93|Q9SG93_ARATH T7M13.4 protein OS=Arabidopsis thaliana G... 47 7e-04
tr|Q58FW3|Q58FW3_ARATH Putative uncharacterized protein OS=Arabi... 47 7e-04
tr|A7Q3Z2|A7Q3Z2_VITVI Chromosome chr13 scaffold_48, whole genom... 46 0.001
tr|A5AL59|A5AL59_VITVI Putative uncharacterized protein OS=Vitis... 46 0.001
tr|Q9LVL8|Q9LVL8_ARATH Similarity to unknown protein OS=Arabidop... 44 0.006
tr|Q9C7V6|Q9C7V6_ARATH BZIP transcription factor, putative; 7463... 43 0.007
tr|B6SHI8|B6SHI8_MAIZE CENP-E like kinetochore protein OS=Zea ma... 42 0.016
tr|B4G282|B4G282_MAIZE Putative uncharacterized protein OS=Zea m... 42 0.016
tr|Q8L5E4|Q8L5E4_HORVU Putative CENP-E like kinetochore protein ... 41 0.037
tr|A8PC91|A8PC91_COPC7 Predicted protein OS=Coprinopsis cinerea ... 41 0.037
tr|Q84VY2|Q84VY2_ARATH At2g30500 (Putative uncharacterized prote... 40 0.048
tr|O04345|O04345_ARATH Putative uncharacterized protein At2g3050... 40 0.048
tr|A7NY02|A7NY02_VITVI Chromosome chr6 scaffold_3, whole genome ... 40 0.048
tr|A2WL43|A2WL43_ORYSI Putative uncharacterized protein OS=Oryza... 40 0.062
tr|Q9C7V7|Q9C7V7_ARATH Putative uncharacterized protein F15H21.4... 40 0.081
tr|Q9AS76|Q9AS76_ORYSJ P0028E10.16 protein (Os01g0168100 protein... 40 0.081
tr|A2ZPP4|A2ZPP4_ORYSJ Putative uncharacterized protein OS=Oryza... 40 0.081
tr|Q60DT8|Q60DT8_ORYSJ Os05g0168800 protein OS=Oryza sativa subs... 39 0.11
tr|A2Y0T2|A2Y0T2_ORYSI Putative uncharacterized protein OS=Oryza... 39 0.11
tr|Q9FJ35|Q9FJ35_ARATH Myosin heavy chain-like protein OS=Arabid... 39 0.14
tr|A8J1V4|A8J1V4_CHLRE Flagellar associated protein OS=Chlamydom... 38 0.24
tr|B0TGY0|B0TGY0_HELMI Peptidase m23, putative OS=Heliobacterium... 38 0.31
tr|Q8VZA9|Q8VZA9_ARATH Putative uncharacterized protein At2g4792... 38 0.31
tr|O82259|O82259_ARATH Putative uncharacterized protein At2g4792... 38 0.31
tr|A7QNA8|A7QNA8_VITVI Chromosome chr2 scaffold_132, whole genom... 38 0.31
tr|Q9FHK5|Q9FHK5_ARATH Gb|AAF19561.1 OS=Arabidopsis thaliana GN=... 37 0.40
tr|Q3E9L5|Q3E9L5_ARATH Uncharacterized protein At5g05180.2 OS=Ar... 37 0.40
tr|Q0WPI1|Q0WPI1_ARATH Putative uncharacterized protein At5g0518... 37 0.40
tr|Q2PEP6|Q2PEP6_TRIPR Putative myosin heavy chain-like protein ... 37 0.53
tr|A7PTZ5|A7PTZ5_VITVI Chromosome chr7 scaffold_31, whole genome... 37 0.53
>tr|Q9SG93|Q9SG93_ARATH T7M13.4 protein OS=Arabidopsis thaliana
GN=T7M13.4 PE=4 SV=1
Length = 278
Score = 46.6 bits (109), Expect = 7e-04
Identities = 24/56 (42%), Positives = 38/56 (67%)
Frame = +2
Query: 5 ELAMEAEKKKNGDVLSGLQQELAFLREEDKRQRTIIFDRAEEKREAIRQLCATLDY 172
E+ E+E KN ++ L+ ++ L ++ + QR +I +R EEKREAIRQLC +LD+
Sbjct: 222 EIKSESETDKN--IVEELRAKVEVLEKQVELQRNVITEREEEKREAIRQLCFSLDH 275
>tr|Q58FW3|Q58FW3_ARATH Putative uncharacterized protein
OS=Arabidopsis thaliana GN=At3g10880 PE=2 SV=1
Length = 319
Score = 46.6 bits (109), Expect = 7e-04
Identities = 24/56 (42%), Positives = 38/56 (67%)
Frame = +2
Query: 5 ELAMEAEKKKNGDVLSGLQQELAFLREEDKRQRTIIFDRAEEKREAIRQLCATLDY 172
E+ E+E KN ++ L+ ++ L ++ + QR +I +R EEKREAIRQLC +LD+
Sbjct: 263 EIKSESETDKN--IVEELRAKVEVLEKQVELQRNVITEREEEKREAIRQLCFSLDH 316
>tr|A7Q3Z2|A7Q3Z2_VITVI Chromosome chr13 scaffold_48, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00029476001
PE=4 SV=1
Length = 539
Score = 45.8 bits (107), Expect = 0.001
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = +2
Query: 77 LREEDKRQRTIIFDRAEEKREAIRQLCATLDYMQTKNRRL 196
L E +RQR +I DRAEEKREAIRQLC +L++ ++ + L
Sbjct: 485 LEREVERQRVVISDRAEEKREAIRQLCFSLEHYRSGYQEL 524
>tr|A5AL59|A5AL59_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_017533 PE=4 SV=1
Length = 317
Score = 45.8 bits (107), Expect = 0.001
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = +2
Query: 77 LREEDKRQRTIIFDRAEEKREAIRQLCATLDYMQTKNRRL 196
L E +RQR +I DRAEEKREAIRQLC +L++ ++ + L
Sbjct: 263 LEREVERQRVVISDRAEEKREAIRQLCFSLEHYRSGYQEL 302
>tr|Q9LVL8|Q9LVL8_ARATH Similarity to unknown protein OS=Arabidopsis
thaliana PE=4 SV=1
Length = 589
Score = 43.5 bits (101), Expect = 0.006
Identities = 22/61 (36%), Positives = 36/61 (59%)
Frame = +2
Query: 14 MEAEKKKNGDVLSGLQQELAFLREEDKRQRTIIFDRAEEKREAIRQLCATLDYMQTKNRR 193
+E+E + G + + +E ++QR + + AEEKRE IRQLC +LDY + + +R
Sbjct: 511 LESEISRLGSEIKARDDRTMEMEKEVEKQRRELEEVAEEKREVIRQLCFSLDYSRDEYKR 570
Query: 194 L 196
L
Sbjct: 571 L 571
>tr|Q9C7V6|Q9C7V6_ARATH BZIP transcription factor, putative;
74638-73126 OS=Arabidopsis thaliana GN=At1g64320 PE=4
SV=1
Length = 476
Score = 43.1 bits (100), Expect = 0.007
Identities = 26/67 (38%), Positives = 35/67 (52%)
Frame = +2
Query: 23 EKKKNGDVLSGLQQELAFLREEDKRQRTIIFDRAEEKREAIRQLCATLDYMQTKNRRLEG 202
EK K VLS + + L + K + + EEKREAIRQLC +DY Q + +L+
Sbjct: 407 EKLKLAKVLSKFETRIKELEVKVKGREVELLSLGEEKREAIRQLCILVDYHQDRYNQLKK 466
Query: 203 VINSVRD 223
I V D
Sbjct: 467 SILKVDD 473
>tr|B6SHI8|B6SHI8_MAIZE CENP-E like kinetochore protein OS=Zea mays
PE=2 SV=1
Length = 614
Score = 42.0 bits (97), Expect = 0.016
Identities = 20/58 (34%), Positives = 39/58 (67%)
Frame = +2
Query: 47 LSGLQQELAFLREEDKRQRTIIFDRAEEKREAIRQLCATLDYMQTKNRRLEGVINSVR 220
LS L +++ L +E ++Q+ +I + AE KREAIRQLC ++++ ++ ++L ++ R
Sbjct: 550 LSELHAQVSELEDEVEKQKLVISESAEGKREAIRQLCFSIEHYRSGYQQLRQLLQGHR 607
>tr|B4G282|B4G282_MAIZE Putative uncharacterized protein OS=Zea mays
PE=4 SV=1
Length = 90
Score = 42.0 bits (97), Expect = 0.016
Identities = 21/58 (36%), Positives = 39/58 (67%)
Frame = +2
Query: 47 LSGLQQELAFLREEDKRQRTIIFDRAEEKREAIRQLCATLDYMQTKNRRLEGVINSVR 220
LS L +++ L EE ++Q+ +I + AE KREAIRQLC ++++ ++ ++L ++ R
Sbjct: 26 LSELCAQVSELEEEVEKQKLVISETAEGKREAIRQLCFSIEHYRSGYQQLRQLLQGHR 83
>tr|Q8L5E4|Q8L5E4_HORVU Putative CENP-E like kinetochore protein
OS=Hordeum vulgare GN=cpel1 PE=2 SV=1
Length = 581
Score = 40.8 bits (94), Expect = 0.037
Identities = 25/78 (32%), Positives = 44/78 (56%)
Frame = +2
Query: 14 MEAEKKKNGDVLSGLQQELAFLREEDKRQRTIIFDRAEEKREAIRQLCATLDYMQTKNRR 193
+ AE + L L+ +++ L E ++Q I + AE KREAIRQLC TL++ +++ +
Sbjct: 504 ISAESAIVHESLLELRAQVSELEELVEKQNLAISESAEGKREAIRQLCFTLEHYRSRYQE 563
Query: 194 LEGVINSVRDKIQRRIAA 247
L ++ + Q +AA
Sbjct: 564 LREMLQQGHRRPQMLMAA 581
>tr|A8PC91|A8PC91_COPC7 Predicted protein OS=Coprinopsis cinerea
(strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_05230 PE=4
SV=1
Length = 1898
Score = 40.8 bits (94), Expect = 0.037
Identities = 27/79 (34%), Positives = 43/79 (54%)
Frame = +2
Query: 5 ELAMEAEKKKNGDVLSGLQQELAFLREEDKRQRTIIFDRAEEKREAIRQLCATLDYMQTK 184
EL M+ EK+ ++ L Q LA EE K+Q+ + A E+ EA R+ + + K
Sbjct: 1097 ELEMQREKEAI-EMEKQLLQRLA--EEERKKQQERAMELAREREEAEREEARRREEQERK 1153
Query: 185 NRRLEGVINSVRDKIQRRI 241
NR E ++N +RDK +R +
Sbjct: 1154 NRETEEMLNDLRDKAERAL 1172
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