BP920078 |
Clone id |
YMU001_000132_G05 |
Library |
YMU01 |
Length |
445 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000132_G05. |
Accession |
BP920078 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CACCGCAATGTGTGGCATCAGGACAGAACCCATCCATAATTGCCCGTCCCTCTCCTCTAT CTCACTTATAAACTTCACTGTCTTTCCTGTTTGGTCCTCTAAAACCTCCAGAATTTTGCC GTCTTGATCCAGACGAATAGCTAGAGCGTGAGGATGTGAGCCTAGAAAGATGGTATTGAG CTGCTTGAAGGTAAGAGGAAGCTGCACAAGTGCTCGGCGCAACCACGGAAACCGCAAGAG AAGTCAAGCAGTCCTTGATTGCCGACAGTATATAGCAACCCAAAATTGCCCTTTACTATT CACTCTCACATTGTCTGGAAACCCAGGCAACTCCGCAAAAGTTTCCATGGAGCCAGCCTC TGCTCCTTTCAACCAAAACCGATTAAGCCTGCATTGACCCGTCTCTGCAAACACCAAAAA GGAACCATCTTTGCTCATCGTAATC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9HDC9 |
Definition |
sp|Q9HDC9|APMAP_HUMAN Adipocyte plasma membrane-associated protein OS=Homo sapiens |
Align length |
151 |
Score (bit) |
80.1 |
E-value |
4.0e-15 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920078|Adiantum capillus-veneris mRNA, clone: YMU001_000132_G05. (445 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9HDC9|APMAP_HUMAN Adipocyte plasma membrane-associated prote... 80 4e-15 sp|Q9D7N9|APMAP_MOUSE Adipocyte plasma membrane-associated prote... 79 1e-14 sp|P94111|STS1_ARATH Strictosidine synthase 1 OS=Arabidopsis tha... 65 1e-10 sp|P92976|STS3_ARATH Strictosidine synthase 3 OS=Arabidopsis tha... 62 8e-10 sp|P18417|STSY_CATRO Strictosidine synthase OS=Catharanthus rose... 55 2e-07 sp|P68175|STSY_RAUSE Strictosidine synthase OS=Rauvolfia serpent... 48 2e-05 sp|P68174|STSY_RAUMA Strictosidine synthase (Fragment) OS=Rauvol... 48 2e-05 sp|Q04183|TR120_YEAST Transport protein particle 120 kDa subunit... 32 1.6 sp|Q9NPR9|GP108_HUMAN Protein GPR108 OS=Homo sapiens GN=GPR108 P... 31 2.1 sp|P46218|Y1674_SULAC Uncharacterized protein Saci_1674 OS=Sulfo... 30 3.5 sp|P49584|PCY1A_CRIGR Choline-phosphate cytidylyltransferase A O... 30 6.0 sp|Q0P4Q0|F16B2_XENTR UPF0518 protein FAM160B2 OS=Xenopus tropic... 30 6.0
>sp|Q9HDC9|APMAP_HUMAN Adipocyte plasma membrane-associated protein OS=Homo sapiens GN=APMAP PE=1 SV=2 Length = 416
Score = 80.1 bits (196), Expect = 4e-15 Identities = 47/151 (31%), Positives = 75/151 (49%), Gaps = 5/151 (3%) Frame = -2
Query: 444 ITMSKDGSFLVFAETGQCRLNRFWLKGAEAGSMETFAE-LPGFPDNVRVNSKGQFWVAIY 268 + +S F++ AET R+ R ++ G G + F E +PGFPDN+R +S G +WV + Sbjct: 262 VQLSPAEDFVLVAETTMARIRRVYVSGLMKGGADLFVENMPGFPDNIRPSSSGGYWVGMS 321
Query: 267 CRQSRTA*LLLRF----PWLRRALVQLPLTFKQLNTIFLGSHPHALAIRLDQDGKILEVL 100 + +L F PW++R + +L F Q T+ ++L + L G L Sbjct: 322 TIRPNPGFSMLDFLSERPWIKRMIFKL---FSQ-ETVMKFVPRYSLVLELSDSGAFRRSL 377
Query: 99 EDQTGKTVKFISEIEERDGQLWMGSVLMPHI 7 D G +ISE+ E DG L++GS P + Sbjct: 378 HDPDGLVATYISEVHEHDGHLYLGSFRSPFL 408
>sp|Q9D7N9|APMAP_MOUSE Adipocyte plasma membrane-associated protein OS=Mus musculus GN=Apmap PE=1 SV=1 Length = 415
Score = 78.6 bits (192), Expect = 1e-14 Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 5/151 (3%) Frame = -2
Query: 444 ITMSKDGSFLVFAETGQCRLNRFWLKGAEAGSMETFAE-LPGFPDNVRVNSKGQFWVAIY 268 + +S + F++ AET R+ R ++ G G + F E +PGFPDN+R +S G +WVA Sbjct: 261 VQLSPEEDFVLVAETTMARIRRVYVSGLMKGGADMFVENMPGFPDNIRPSSSGGYWVAAA 320
Query: 267 CRQSRTA*LLLRF----PWLRRALVQLPLTFKQLNTIFLGSHPHALAIRLDQDGKILEVL 100 ++ +L F P+++R + ++ F Q T+ ++L + + G L Sbjct: 321 TIRANPGFSMLDFLSDKPFIKRMIFKM---FSQ-ETVMKFVPRYSLVLEVSDSGAFRRSL 376
Query: 99 EDQTGKTVKFISEIEERDGQLWMGSVLMPHI 7 D G+ V ++SE E DG L++GS P I Sbjct: 377 HDPDGQVVTYVSEAHEHDGYLYLGSFRSPFI 407
>sp|P94111|STS1_ARATH Strictosidine synthase 1 OS=Arabidopsis thaliana GN=SS1 PE=2 SV=2 Length = 335
Score = 65.1 bits (157), Expect = 1e-10 Identities = 41/149 (27%), Positives = 76/149 (51%), Gaps = 3/149 (2%) Frame = -2
Query: 438 MSKDGSFLVFAETGQCRLNRFWLKGAEAGSMETFAELPGFPDNV-RVNSKGQFWVAIYCR 262 +S DGSF++ ++ + + R+W+KG +AGS E F PDN+ R+ S G FWVA Sbjct: 209 VSSDGSFVLVSQFTKSNIKRYWIKGPKAGSSEDFTNSVSNPDNIKRIGSTGNFWVA---- 264
Query: 261 QSRTA*LLLRFPWLRRALVQLPLTFKQLNTIFLGSHPHALAIRLDQDGKILEV--LEDQT 88 +N I + ++P A++++ +G++L+ L+D+ Sbjct: 265 -------------------------SVVNKIIVPTNPS--AVKVNSNGEVLQTIPLKDKF 297
Query: 87 GKTVKFISEIEERDGQLWMGSVLMPHIAV 1 G T+ +SE+ E +G L++G++ P + Sbjct: 298 GDTL--LSEVNEFEGNLYIGTLTGPFAGI 324
>sp|P92976|STS3_ARATH Strictosidine synthase 3 OS=Arabidopsis thaliana GN=SS3 PE=2 SV=2 Length = 329
Score = 62.4 bits (150), Expect = 8e-10 Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 3/149 (2%) Frame = -2
Query: 438 MSKDGSFLVFAETGQCRLNRFWLKGAEAGSMETFAELPGFPDNV-RVNSKGQFWVAIYCR 262 +S DGSF++ + + + R+W+KG++AG+ E F PDN+ R+ S G FWVA Sbjct: 211 VSSDGSFVLVGQFTKSNIKRYWIKGSKAGTSEDFTNSVSNPDNIKRIGSTGNFWVA---- 266
Query: 261 QSRTA*LLLRFPWLRRALVQLPLTFKQLNTIFLGSHPHALAIRLDQDGKILEV--LEDQT 88 +N+ ++P A+++ GK+L+ L+D+ Sbjct: 267 -------------------------SVVNSATGPTNPS--AVKVSSAGKVLQTIPLKDKF 299
Query: 87 GKTVKFISEIEERDGQLWMGSVLMPHIAV 1 G T+ +SE+ E GQL++G++ P + Sbjct: 300 GDTL--VSEVNEYKGQLYIGALFGPFAGI 326
>sp|P18417|STSY_CATRO Strictosidine synthase OS=Catharanthus roseus GN=STR1 PE=1 SV=2 Length = 352
Score = 54.7 bits (130), Expect = 2e-07 Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 2/148 (1%) Frame = -2
Query: 438 MSKDGSFLVFAETGQCRLNRFWLKGAEAGSMETFAELPGFPDNVRVNSKGQFWVAIYCRQ 259 +S DGSF+V AE R+ ++WL+G + GS E +P P N++ NS G FWV+ Sbjct: 220 ISADGSFVVVAEFLSNRIVKYWLEGPKKGSAEFLVTIPN-PGNIKRNSDGHFWVS----- 273
Query: 258 SRTA*LLLRFPWLRRALVQLPLTFKQLNTIFLGSHPHALA--IRLDQDGKILEVLEDQTG 85 + ++L+ G H ++ I+ D G IL+V+ Sbjct: 274 ----------------------SSEELDG---GQHGRVVSRGIKFDGFGNILQVIPLPPP 308
Query: 84 KTVKFISEIEERDGQLWMGSVLMPHIAV 1 + +I+E DG L++GS+ + + Sbjct: 309 YEGEHFEQIQEHDGLLYIGSLFHSSVGI 336
>sp|P68175|STSY_RAUSE Strictosidine synthase OS=Rauvolfia serpentina GN=STR1 PE=1 SV=1 Length = 344
Score = 48.1 bits (113), Expect = 2e-05 Identities = 34/146 (23%), Positives = 66/146 (45%) Frame = -2
Query: 438 MSKDGSFLVFAETGQCRLNRFWLKGAEAGSMETFAELPGFPDNVRVNSKGQFWVAIYCRQ 259 +S D SF++ AE ++ ++WL+G + G+ E ++P P N++ N+ G FWV+ Sbjct: 214 VSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVS----- 267
Query: 258 SRTA*LLLRFPWLRRALVQLPLTFKQLNTIFLGSHPHALAIRLDQDGKILEVLEDQTGKT 79 + ++L+ G I+ D+ G ILEV+ Sbjct: 268 ----------------------SSEELDGNMHG-RVDPKGIKFDEFGNILEVIPLPPPFA 304
Query: 78 VKFISEIEERDGQLWMGSVLMPHIAV 1 + +I+E DG L++G++ + + Sbjct: 305 GEHFEQIQEHDGLLYIGTLFHGSVGI 330
>sp|P68174|STSY_RAUMA Strictosidine synthase (Fragment) OS=Rauvolfia mannii GN=STR1 PE=3 SV=1 Length = 342
Score = 48.1 bits (113), Expect = 2e-05 Identities = 34/146 (23%), Positives = 66/146 (45%) Frame = -2
Query: 438 MSKDGSFLVFAETGQCRLNRFWLKGAEAGSMETFAELPGFPDNVRVNSKGQFWVAIYCRQ 259 +S D SF++ AE ++ ++WL+G + G+ E ++P P N++ N+ G FWV+ Sbjct: 212 VSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVS----- 265
Query: 258 SRTA*LLLRFPWLRRALVQLPLTFKQLNTIFLGSHPHALAIRLDQDGKILEVLEDQTGKT 79 + ++L+ G I+ D+ G ILEV+ Sbjct: 266 ----------------------SSEELDGNMHG-RVDPKGIKFDEFGNILEVIPLPPPFA 302
Query: 78 VKFISEIEERDGQLWMGSVLMPHIAV 1 + +I+E DG L++G++ + + Sbjct: 303 GEHFEQIQEHDGLLYIGTLFHGSVGI 328
>sp|Q04183|TR120_YEAST Transport protein particle 120 kDa subunit OS=Saccharomyces cerevisiae GN=TRS120 PE=1 SV=1 Length = 1289
Score = 31.6 bits (70), Expect = 1.6 Identities = 18/41 (43%), Positives = 24/41 (58%) Frame = +2
Query: 17 IRTEPIHNCPSLSSISLINFTVFPVWSSKTSRILPS*SRRI 139 I TEP C + S +NF ++ SKTS+ILP +RRI Sbjct: 1192 IITEPTSTCRRKQN-STVNFLDIVIFDSKTSKILPRSNRRI 1231
>sp|Q9NPR9|GP108_HUMAN Protein GPR108 OS=Homo sapiens GN=GPR108 PE=2 SV=2 Length = 543
Score = 31.2 bits (69), Expect = 2.1 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%) Frame = -2
Query: 291 GQFWVAIYCRQSRTA*LLLRFPWLRRALV---QLPLTFKQLNTIFLGSHPHAL 142 G FWV+I CR + + + + WL AL + L F +N F+ S H + Sbjct: 275 GIFWVSILCRNTYS---VFKIHWLMAALAFTKSISLLFHSINYYFINSQGHPI 324
>sp|P46218|Y1674_SULAC Uncharacterized protein Saci_1674 OS=Sulfolobus acidocaldarius GN=Saci_1674 PE=3 SV=2 Length = 275
Score = 30.4 bits (67), Expect = 3.5 Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 8/116 (6%) Frame = -2
Query: 444 ITMSKDGSFLVFAETGQCRLNRFW--LKGAEAGSMETFAELP---GFPDNVRVNSKGQFW 280 + S D +L + ++ ++ +F L+ + E +L G PD + ++S+G W Sbjct: 142 LAWSLDNKYLYYIDSPTRKIFKFKFDLERGDISQREVLIDLKEYEGVPDGMTIDSEGNLW 201
Query: 279 VAIYCRQSRTA*LLLRFPWLRRALVQ---LPLTFKQLNTIFLGSHPHALAIRLDQD 121 VA+Y + +LR +R ++Q LP + + IF GS+ L I D Sbjct: 202 VALYGGGA-----VLRIDVEKRKVIQELRLPAP-RVTSVIFGGSNMDTLFITTAND 251
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9M1J5 |
Definition |
tr|Q9M1J5|Q9M1J5_ARATH Putative uncharacterized protein F24I3.110 OS=Arabidopsis thaliana |
Align length |
148 |
Score (bit) |
167.0 |
E-value |
2.0e-40 |
Report |
|