BP920090
Clone id YMU001_000132_H05
Library
Length 423
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000132_H05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TCTCCCTCTTTAAGGGCCCGCGTCAGCTCCATGTGCACTGTATCCATTGTCCTTTTGCAG
AGCCTTCAATCTAGAAGCCAATAAACCCTTTTCTCCTTTCTGGGGAACCAACTTCTTCCA
CAAGCTAGCTTTCTCTCTTCTAATAGGCTTGTGATCTTATGGTGAAGATGCTCAAACCTG
CCAGAAATCATGCTCTTGGCATCCAAACTTCTCGATTGTGCACGAACGGGTAGCAAATTA
TTCTCCTTTACAGAAGTGACTGCTTCGTGAAGCTTAAACAACTCTGTCTCCAAGTTTGGC
CTCATGTCATTGCTATCCTGAAGCTGCATTTGCAGCTTCTCTTTCTGCTCTTCAAAACCT
TTCACAAGTGACACCCTGCCTTCCATACAATTACTGACTTGTCCTTCAAGTTCTAGTATT
CTA
■■Homology search results ■■ -
sp_hit_id Q803Q4
Definition sp|Q803Q4|DEP1A_DANRE DEP domain-containing protein 1A OS=Danio rerio
Align length 81
Score (bit) 32.0
E-value 1.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920090|Adiantum capillus-veneris mRNA, clone:
YMU001_000132_H05.
(423 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q803Q4|DEP1A_DANRE DEP domain-containing protein 1A OS=Danio ... 32 1.0
sp|Q5V883|CDC68_HALMA Cell division control protein 6 homolog 8 ... 30 3.9
sp|Q8BI79|CCD40_MOUSE Coiled-coil domain-containing protein 40 O... 30 5.0
sp|Q99PP2|ZN318_MOUSE Zinc finger protein 318 (Fragment) OS=Mus ... 29 6.6
sp|Q7Z7A1|CP110_HUMAN Centriolin OS=Homo sapiens GN=CEP110 PE=1 ... 29 6.6
sp|P44680|Y387_HAEIN Probable ATP-dependent helicase HI0387 OS=H... 29 8.6

>sp|Q803Q4|DEP1A_DANRE DEP domain-containing protein 1A OS=Danio
rerio GN=depdc1a PE=2 SV=1
Length = 800

Score = 32.0 bits (71), Expect = 1.0
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Frame = -2

Query: 422 RILELEGQVSNCMEGRVSLVKGFXXXXXXXXXXXQDSNDMRPNLETELFKLHEAVTSV-- 249
R LEG ++NC + R+ + + + PNL++ L ++ + +SV
Sbjct: 409 RSCSLEGNINNCAKSRLFRSSESLESCSSDKSNPETDSPLEPNLQSSLVSINTSGSSVSS 468

Query: 248 ------KENNLLPVRAQSRSL 204
+ NN P RA+ RS+
Sbjct: 469 QLSADLRRNNSRPARARPRSI 489


>sp|Q5V883|CDC68_HALMA Cell division control protein 6 homolog 8
OS=Haloarcula marismortui GN=cdc6-8 PE=3 SV=1
Length = 402

Score = 30.0 bits (66), Expect = 3.9
Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Frame = -2

Query: 266 EAVTSVKENNLLPVRAQSRSLDAKSMISGRFEHLHHKITSLLEERKLACGRSWFPRKEKR 87
E VKE++L RA + +ISG H H + +L K R WF R
Sbjct: 280 ENAERVKESHLTDARASAEVDRLLELISGLPPHSKHVLLALANLTKNHPDREWFRTVRVR 339

Query: 86 VYWLLD*RLCKRT-MDTVHMELTRAL 12
+L +C R+ D + E TR L
Sbjct: 340 EIYL---EVCDRSGADPLSAERTRQL 362


>sp|Q8BI79|CCD40_MOUSE Coiled-coil domain-containing protein 40 OS=Mus
musculus GN=Ccdc40 PE=2 SV=1
Length = 1192

Score = 29.6 bits (65), Expect = 5.0
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -2

Query: 293 LETELFKLHEAVTSVKENNLLP-VRAQSRSLDAKSMISGRFEHLHHKITSLLEERK 129
LE E+ +L T++K NLL V Q+R ++ I G++ LH S L ERK
Sbjct: 1097 LEEEINQL----TALKRQNLLEIVTLQTRGKHLQAAIEGKYVFLHRNSRSQLMERK 1148


>sp|Q99PP2|ZN318_MOUSE Zinc finger protein 318 (Fragment) OS=Mus
musculus GN=Znf318 PE=1 SV=2
Length = 2064

Score = 29.3 bits (64), Expect = 6.6
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2

Query: 215 IVHERVANYSPLQK*LLREA*TTLSPS-LASCHCYPEAAFAASLSALQNLSQVTPCLP 385
++ E V SPLQK LLR TT+SPS L C P+ ++ + + PC P
Sbjct: 1913 MLSEDVKETSPLQKDLLRMESTTVSPSGLGPSPCLPD--LVDFVTRTPGVPKQKPCSP 1968


>sp|Q7Z7A1|CP110_HUMAN Centriolin OS=Homo sapiens GN=CEP110 PE=1 SV=2
Length = 2325

Score = 29.3 bits (64), Expect = 6.6
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = -2

Query: 296 NLETELFKLHEAVTSVKENNLLPVRAQSRSLDAKSMISGRFEHLHHKITSLLEERK 129
NLE E+ +L + + +K R + +K E LHH I LL+E+K
Sbjct: 1320 NLENEVSRLEDIMQHLKSKK----REERWMRASKRQSEKEMEELHHNIDDLLQEKK 1371


>sp|P44680|Y387_HAEIN Probable ATP-dependent helicase HI0387
OS=Haemophilus influenzae GN=HI0387 PE=3 SV=1
Length = 640

Score = 28.9 bits (63), Expect = 8.6
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = -2

Query: 227 VRAQSRSLDAKSMISGRFEHLHHKITSLLEERKLACGRS 111
VR R L +S + FE L KI L E KLA GRS
Sbjct: 298 VRGNWRELYTQSAVKKAFELLQEKIDFLSEVIKLALGRS 336


tr_hit_id Q7RBK8
Definition tr|Q7RBK8|Q7RBK8_PLAYO Similar to macrophage erythroblast attacher, putative OS=Plasmodium yoelii yoelii
Align length 86
Score (bit) 33.5
E-value 5.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920090|Adiantum capillus-veneris mRNA, clone:
YMU001_000132_H05.
(423 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q7RBK8|Q7RBK8_PLAYO Similar to macrophage erythroblast attach... 33 5.4
tr|Q4YU00|Q4YU00_PLABE Putative uncharacterized protein OS=Plasm... 33 5.4

>tr|Q7RBK8|Q7RBK8_PLAYO Similar to macrophage erythroblast attacher,
putative OS=Plasmodium yoelii yoelii GN=PY06135 PE=4
SV=1
Length = 556

Score = 33.5 bits (75), Expect = 5.4
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Frame = -2

Query: 293 LETELFKLHEAVTSVKENNLLPV--RAQSRSLDAKSMISGRFEHLHHKITSLLEERKL-- 126
+E +L L+E + K N ++ + + +++K M+S + LH ++ + EE +
Sbjct: 213 IEKKLLNLNEKMQLTKINTIIEKLNALKKKVINSKKMVSQVIKKLHSRLEYIYEEEDIQV 272

Query: 125 -ACGRSW-FPRKEKRVYWLLD*RLCK 54
+ R++ F +KR+ WL+D C+
Sbjct: 273 ESLKRNFNFDSYDKRINWLIDGYFCR 298


>tr|Q4YU00|Q4YU00_PLABE Putative uncharacterized protein
OS=Plasmodium berghei GN=PB001128.02.0 PE=4 SV=1
Length = 400

Score = 33.5 bits (75), Expect = 5.4
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Frame = -2

Query: 293 LETELFKLHEAVTSVKENNLLPV--RAQSRSLDAKSMISGRFEHLHHKITSLLEERKL-- 126
+E +L L+E + K N ++ + + +++K M+S + LH ++ + EE +
Sbjct: 57 IEKKLLNLNEQMQLTKINTIIEKLNALKKKVINSKKMLSQFIKKLHSRLEYIYEEEDIQV 116

Query: 125 -ACGRSW-FPRKEKRVYWLLD*RLCK 54
+ R++ F EKR+ WL+D C+
Sbjct: 117 ESLKRNFNFYSYEKRINWLIDGYFCR 142