BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920097|Adiantum capillus-veneris mRNA, clone:
YMU001_000133_A01.
         (604 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q86BS6|METL_DROME Methyltransferase-like protein OS=Drosophil...    31   5.6  
sp|Q1KXX0|RPOC2_HELAN DNA-directed RNA polymerase subunit beta''...    30   9.5  
sp|Q90WV2|PRI1B_XENLA Prickle-like protein 1-B OS=Xenopus laevis...    30   9.5  

>sp|Q86BS6|METL_DROME Methyltransferase-like protein OS=Drosophila
           melanogaster GN=metl PE=1 SV=2
          Length = 325

 Score = 30.8 bits (68), Expect = 5.6
 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 6/62 (9%)
 Frame = -2

Query: 501 LNAKWSEEDLADTPRIWNF------TLTFFN*HWLFQEFP*VSGLNLVQAGLHKREITPL 340
           + A+  E    D P+ W+          F + HWLF EFP ++ L    A L  R I  L
Sbjct: 80  MEAEQKERFQTDAPKFWDSFYGIHDNRFFKDRHWLFTEFPELAPLAADSAVLQPRSIFEL 139

Query: 339 LC 334
            C
Sbjct: 140 GC 141


>sp|Q1KXX0|RPOC2_HELAN DNA-directed RNA polymerase subunit beta''
            OS=Helianthus annuus GN=rpoC2 PE=3 SV=1
          Length = 1362

 Score = 30.0 bits (66), Expect = 9.5
 Identities = 32/145 (22%), Positives = 62/145 (42%), Gaps = 28/145 (19%)
 Frame = +1

Query: 205  NHFQESHFEVLLS*SH-----PTEYCQHINILEVQRETSDFIPSR*SMTKERSNFP---- 357
            N  +ES   ++LS S+     P    ++ N+++   +    IP R S+    + FP    
Sbjct: 931  NRNKESQSLIILSSSNCSRIGPFNDVKYPNVIKDSIKKDPLIPIRNSLGPLGTGFPIYHF 990

Query: 358  ------------LMQSRLHQIQPADLWELLE*PMLVKKRQGKVPNPRSIC*VLLRPFRIQ 501
                        L+ + L       ++++L+  +L     GK+ NP S   ++L PF++ 
Sbjct: 991  DLFSHLITHNQILVTNYLQLDNLKQIFQILKYYLL--DENGKIYNPYSCSNIILNPFKLN 1048

Query: 502  CRMVHF-------TFLFLLEYLCRN 555
               +H+       T + L ++LC N
Sbjct: 1049 WYFLHYNYCEETSTIVSLGQFLCEN 1073


>sp|Q90WV2|PRI1B_XENLA Prickle-like protein 1-B OS=Xenopus laevis
           GN=prickle1-B PE=2 SV=2
          Length = 832

 Score = 30.0 bits (66), Expect = 9.5
 Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
 Frame = +1

Query: 127 HVYRDSRPKCCSHFVNHSTQALSCASNHFQESHFEVLLS*S--HPTEYCQHINILEVQRE 300
           ++ +D RP CC  F +H  +      +H    H ++       H TE C      +V   
Sbjct: 230 YIMKDGRPFCCGCFESHYAEYCESCGDHIGVDHAQMTYDGQHWHATETCFSCAQCKVSLL 289

Query: 301 TSDFIPSR 324
              F+P +
Sbjct: 290 GCPFLPKK 297

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920097|Adiantum capillus-veneris mRNA, clone:
YMU001_000133_A01.
         (604 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******