BP920118
Clone id YMU001_000133_C03
Library
Length 517
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000133_C03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TGGCAGAGGTTTTGGACTGTTTTTCCTTCTCCAACATCTCAGAGCAACGCGCGAGACAAT
GGGATCTTGTCTTTGGGACGAACACACATAAGATAGCGCTTTCTCTGGTCAGGAGTGCTG
CCTTGATAACCTTGATTGAGGATGTCAGGNAGCTGTAAGGTTGTAATTGTAAGCTGTTTA
TTGTAGTGGTGCATTTTAGCCCTTGGCTAGTGGTTTTTCCCCTTTTGAGTTACTTAGAGT
CGATAGTGTGTCTAGTTCCTGGCCTTTTTAGACCTTACAAAGCGGCTTCTTACTTATTTG
ACTGAACTTTGGGCATGTAGAACAATCCTCCACATTCTTTTACTGATCTGTAAGCCATTG
GTTGACTTGGCTTTTTACAGCATTCAATTGTGCAGTTGCTTTCCTTGTACTAACCTCAAA
AGAGGCCCACAAGCAATATGTAGCTTGAGAGACCCAATGTGTATCTTGAAGCAAATTAAG
AAAATCTTAAAGTTTTGATAGACATCAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q8VZS9
Definition sp|Q8VZS9|FZR1_ARATH Protein FIZZY-RELATED 1 OS=Arabidopsis thaliana
Align length 29
Score (bit) 41.2
E-value 0.003
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920118|Adiantum capillus-veneris mRNA, clone:
YMU001_000133_C03.
(506 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8VZS9|FZR1_ARATH Protein FIZZY-RELATED 1 OS=Arabidopsis thal... 41 0.003
sp|Q8LPL5|FZR3_ARATH Protein FIZZY-RELATED 3 OS=Arabidopsis thal... 39 0.011
sp|Q8L3Z8|FZR2_ARATH Protein FIZZY-RELATED 2 OS=Arabidopsis thal... 35 0.26
sp|P10033|SPIKE_FIPV Spike glycoprotein OS=Feline coronavirus (s... 31 3.8
sp|Q7T6T3|SPIKE_CVCBG Spike glycoprotein OS=Canine coronavirus (... 30 4.9
sp|Q8CRA8|HSSS_STAES Heme sensor protein hssS OS=Staphylococcus ... 30 8.4

>sp|Q8VZS9|FZR1_ARATH Protein FIZZY-RELATED 1 OS=Arabidopsis
thaliana GN=FZR1 PE=1 SV=1
Length = 475

Score = 41.2 bits (95), Expect = 0.003
Identities = 19/29 (65%), Positives = 20/29 (68%)
Frame = +1

Query: 7 RFWTVFPSPTSQSNARDNGILSLGRTHIR 93
RFW VFPSP SQS + G LS GRT IR
Sbjct: 447 RFWNVFPSPKSQSRESEIGALSFGRTTIR 475


>sp|Q8LPL5|FZR3_ARATH Protein FIZZY-RELATED 3 OS=Arabidopsis
thaliana GN=FZR3 PE=1 SV=1
Length = 481

Score = 39.3 bits (90), Expect = 0.011
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +1

Query: 7 RFWTVFPSPTSQSNARDNGILSLGRTHIR 93
RFW VFPS Q+ +D G+ SLGRT IR
Sbjct: 453 RFWNVFPSVKMQTPVKDTGLWSLGRTQIR 481


>sp|Q8L3Z8|FZR2_ARATH Protein FIZZY-RELATED 2 OS=Arabidopsis
thaliana GN=FZR2 PE=1 SV=1
Length = 483

Score = 34.7 bits (78), Expect = 0.26
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +1

Query: 7 RFWTVFPSPTSQSNARDNGILSLGRTHIR 93
RFW VFPSP SQ+ + G GRT IR
Sbjct: 455 RFWNVFPSPKSQNTDSEIGSSFFGRTTIR 483


>sp|P10033|SPIKE_FIPV Spike glycoprotein OS=Feline coronavirus (strain
FIPV WSU-79/1146) GN=S PE=1 SV=1
Length = 1452

Score = 30.8 bits (68), Expect = 3.8
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +1

Query: 259 LAFLDLTKRLLTYLTELWACRTILHILLLICKPLVDLAFYSIQLCSCFPCTNLKRGPQAI 438
L L+ R+ TY+ W ++ ++++ C PL+ +S C C C L +I
Sbjct: 1377 LVNLEWLNRIETYVKWPWYVWLLIGLVVVFCIPLLLFCCFSTGCCGCIGC--LGSCCHSI 1434

Query: 439 CSLR 450
CS R
Sbjct: 1435 CSRR 1438


>sp|Q7T6T3|SPIKE_CVCBG Spike glycoprotein OS=Canine coronavirus
(strain BGF10) GN=S PE=3 SV=1
Length = 1453

Score = 30.4 bits (67), Expect = 4.9
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1

Query: 259 LAFLDLTKRLLTYLTELWACRTILHILLLICKPLVDLAFYSIQLCSCFPC 408
L L+ R+ TY+ W ++ ++++ C PL+ S C CF C
Sbjct: 1378 LVNLEWLNRIETYVKWPWYVWLLIGLVVIFCIPLLLFCCCSTGCCGCFGC 1427


>sp|Q8CRA8|HSSS_STAES Heme sensor protein hssS OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=hssS PE=3 SV=1
Length = 451

Score = 29.6 bits (65), Expect = 8.4
Identities = 20/55 (36%), Positives = 25/55 (45%)
Frame = +2

Query: 272 TLQSGFLLI*LNFGHVEQSSTFFY*SVSHWLTWLFTAFNCAVAFLVLTSKEAHKQ 436
TLQS F + N G V+Q F +VSH + T + L LT E KQ
Sbjct: 221 TLQSRFNTMRQNLGQVDQMRQHFVQNVSHEIKTPLTHLQRLLTQLELTQNEEEKQ 275


tr_hit_id A9STT8
Definition tr|A9STT8|A9STT8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 29
Score (bit) 50.4
E-value 5.0e-05
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920118|Adiantum capillus-veneris mRNA, clone:
YMU001_000133_C03.
(506 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9STT8|A9STT8_PHYPA Predicted protein OS=Physcomitrella paten... 50 5e-05
tr|A9SS69|A9SS69_PHYPA Predicted protein OS=Physcomitrella paten... 50 5e-05
tr|A9T3S5|A9T3S5_PHYPA Predicted protein OS=Physcomitrella paten... 47 5e-04
tr|B8LPX8|B8LPX8_PICSI Putative uncharacterized protein OS=Picea... 45 0.002
tr|A9T839|A9T839_PHYPA Predicted protein OS=Physcomitrella paten... 43 0.010
tr|Q9XED5|Q9XED5_MEDVA Cell cycle switch protein OS=Medicago var... 42 0.022
tr|Q9M7I2|Q9M7I2_MEDTR WD-repeat cell cycle regulatory protein O... 42 0.022
tr|Q4TU47|Q4TU47_PEA Cell cycle switch protein CCS52A OS=Pisum s... 42 0.022
tr|A7PIS7|A7PIS7_VITVI Chromosome chr13 scaffold_17, whole genom... 40 0.064
tr|A5BRF9|A5BRF9_VITVI Putative uncharacterized protein OS=Vitis... 40 0.064
tr|A7QKC9|A7QKC9_VITVI Chromosome chr2 scaffold_112, whole genom... 40 0.083
tr|A5BAG1|A5BAG1_VITVI Putative uncharacterized protein OS=Vitis... 40 0.083
tr|Q6V5L1|Q6V5L1_LUPLU Cell cycle switch protein CCS52a OS=Lupin... 39 0.11
tr|Q6UZ79|Q6UZ79_MEDTR B-type cell cycle switch protein ccs52B O... 38 0.32
tr|Q6T2Z5|Q6T2Z5_SOYBN WD-repeat cell cycle regulatory protein O... 38 0.32
tr|Q5JM92|Q5JM92_ORYSJ Putative cell cycle switch protein (Os01g... 37 0.41
tr|B8A9X3|B8A9X3_ORYSI Putative uncharacterized protein OS=Oryza... 37 0.41
tr|B6T9C7|B6T9C7_MAIZE Fizzy-related protein OS=Zea mays PE=2 SV=1 37 0.41
tr|B4FG61|B4FG61_MAIZE Putative uncharacterized protein OS=Zea m... 37 0.41
tr|Q4TU48|Q4TU48_LOTJA Cell cycle switch protein CCS52A OS=Lotus... 36 0.92
tr|Q5SCA6|Q5SCA6_OSTTA Cell cycle switch protein OS=Ostreococcus... 33 7.8
tr|Q00WT3|Q00WT3_OSTTA Cell cycle switch protein CCS52A (ISS) OS... 33 7.8

>tr|A9STT8|A9STT8_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_58645 PE=4 SV=1
Length = 472

Score = 50.4 bits (119), Expect = 5e-05
Identities = 22/29 (75%), Positives = 23/29 (79%)
Frame = +1

Query: 7 RFWTVFPSPTSQSNARDNGILSLGRTHIR 93
RFW VFPSP SQS RD G+ SLGRTHIR
Sbjct: 444 RFWNVFPSPKSQSAVRDTGVWSLGRTHIR 472


>tr|A9SS69|A9SS69_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_83285 PE=4 SV=1
Length = 468

Score = 50.4 bits (119), Expect = 5e-05
Identities = 22/29 (75%), Positives = 23/29 (79%)
Frame = +1

Query: 7 RFWTVFPSPTSQSNARDNGILSLGRTHIR 93
RFW VFPSP SQS RD G+ SLGRTHIR
Sbjct: 440 RFWNVFPSPKSQSAVRDTGVWSLGRTHIR 468


>tr|A9T3S5|A9T3S5_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_139794 PE=4 SV=1
Length = 471

Score = 47.0 bits (110), Expect = 5e-04
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +1

Query: 7 RFWTVFPSPTSQSNARDNGILSLGRTHIR 93
RFW VFPSP SQS RDN + SLGRT+IR
Sbjct: 443 RFWNVFPSPKSQSVVRDNEVWSLGRTYIR 471


>tr|B8LPX8|B8LPX8_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 508

Score = 45.1 bits (105), Expect = 0.002
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +1

Query: 7 RFWTVFPSPTSQSNARDNGILSLGRTHIR 93
RFW +FPSP SQS D+G+ SLGRT IR
Sbjct: 480 RFWNIFPSPKSQSAVHDSGLWSLGRTQIR 508


>tr|A9T839|A9T839_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_219794 PE=4 SV=1
Length = 516

Score = 42.7 bits (99), Expect = 0.010
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +1

Query: 7 RFWTVFPSPTSQSNARDNGILSLGRTHIR 93
RFW VFPS SQ+ D G+ SLGRTHIR
Sbjct: 488 RFWNVFPSSKSQNAVPDAGVWSLGRTHIR 516


>tr|Q9XED5|Q9XED5_MEDVA Cell cycle switch protein OS=Medicago varia
GN=ccs52 PE=2 SV=1
Length = 475

Score = 41.6 bits (96), Expect = 0.022
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +1

Query: 7 RFWTVFPSPTSQSNARDNGILSLGRTHIR 93
RFW VFPSP SQ+ + G LSLGRT IR
Sbjct: 447 RFWNVFPSPKSQNTESEIGALSLGRTTIR 475


>tr|Q9M7I2|Q9M7I2_MEDTR WD-repeat cell cycle regulatory protein
OS=Medicago truncatula GN=CCS52 PE=4 SV=1
Length = 475

Score = 41.6 bits (96), Expect = 0.022
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +1

Query: 7 RFWTVFPSPTSQSNARDNGILSLGRTHIR 93
RFW VFPSP SQ+ + G LSLGRT IR
Sbjct: 447 RFWNVFPSPKSQNTESEIGALSLGRTTIR 475


>tr|Q4TU47|Q4TU47_PEA Cell cycle switch protein CCS52A OS=Pisum
sativum PE=2 SV=1
Length = 475

Score = 41.6 bits (96), Expect = 0.022
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +1

Query: 7 RFWTVFPSPTSQSNARDNGILSLGRTHIR 93
RFW VFPSP SQ+ + G LSLGRT IR
Sbjct: 447 RFWNVFPSPKSQNTESEIGALSLGRTTIR 475


>tr|A7PIS7|A7PIS7_VITVI Chromosome chr13 scaffold_17, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00018459001
PE=4 SV=1
Length = 471

Score = 40.0 bits (92), Expect = 0.064
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +1

Query: 7 RFWTVFPSPTSQSNARDNGILSLGRTHIR 93
RFW +FPS + + +D G+ S+GRTHIR
Sbjct: 443 RFWNIFPSMKTPAPVKDTGVWSMGRTHIR 471


>tr|A5BRF9|A5BRF9_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_042043 PE=4 SV=1
Length = 456

Score = 40.0 bits (92), Expect = 0.064
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +1

Query: 7 RFWTVFPSPTSQSNARDNGILSLGRTHIR 93
RFW +FPS + + +D G+ S+GRTHIR
Sbjct: 428 RFWNIFPSMKTPAPVKDTGVWSMGRTHIR 456