BP920121 |
Clone id |
YMU001_000133_C06 |
Library |
YMU01 |
Length |
542 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000133_C06. |
Accession |
BP920121 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
ACTAAGTGGCAGGCAAGTGGCTATCAGGTGATGTATGCTGATGGAGTAAAGATGGAACAG TTTGCTGCCACGTTGGAAGGAAAGGCCATGAGTTGGTTCAACCAATATGGCATTGCACAT TTTGCTACTTATAATGCTTTGAAGCAGGCATTTCTACAGAGATTTAGAAAGGAGAAGACT CCGACTGATGTCCTCAGAAAACTCAGAGACATTAAGCAAAATAAGATGCTGGTTGAAGAC TATGCATAGAAGTTCAGAATTTTAGTAGAAAGATTGCAGGGGAATGAAAGACCCACTAAT GAAATGTTAGCAGGTTATTTTTTGAAAGGATTGAGAAGCAGCTTAAAGGGAGCAGTAGCT AGCATTGATATTGCTGGAGGTCTGGATGACCTTGTTACTGCTGCTGCAAGGGTGGAGAAG AGACTTGGCATGACCAAAGCAAAAGGAAAAGAAGACAGTGACTCAGATTCAGAAGAAGCA TCTGAAGACACAGATTCCAGTGGGAACTCAGATTTAAACTCACCATCAGACAGTGATGAG GA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q86TG7 |
Definition |
sp|Q86TG7|PEG10_HUMAN Retrotransposon-derived protein PEG10 OS=Homo sapiens |
Align length |
144 |
Score (bit) |
38.5 |
E-value |
0.021 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TM52 |
Definition |
tr|A9TM52|A9TM52_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
139 |
Score (bit) |
53.1 |
E-value |
9.0e-06 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920121|Adiantum capillus-veneris mRNA, clone: YMU001_000133_C06. (542 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TM52|A9TM52_PHYPA Predicted protein OS=Physcomitrella paten... 53 9e-06 tr|A9RZ76|A9RZ76_PHYPA Predicted protein OS=Physcomitrella paten... 52 2e-05 tr|A9U5C4|A9U5C4_PHYPA Predicted protein OS=Physcomitrella paten... 52 2e-05 tr|A9SNJ3|A9SNJ3_PHYPA Predicted protein OS=Physcomitrella paten... 52 2e-05 tr|A9T330|A9T330_PHYPA Predicted protein OS=Physcomitrella paten... 52 3e-05 tr|A9RK63|A9RK63_PHYPA Predicted protein OS=Physcomitrella paten... 52 3e-05 tr|A9SC18|A9SC18_PHYPA Predicted protein OS=Physcomitrella paten... 50 6e-05 tr|A4UVU4|A4UVU4_MACEU Paternally expressed 10 OS=Macropus eugen... 50 1e-04 tr|A9T5U6|A9T5U6_PHYPA Predicted protein OS=Physcomitrella paten... 49 2e-04 tr|A9SXA6|A9SXA6_PHYPA Predicted protein OS=Physcomitrella paten... 49 2e-04 tr|A9TQT8|A9TQT8_PHYPA Predicted protein OS=Physcomitrella paten... 48 4e-04 tr|A9TIC5|A9TIC5_PHYPA Predicted protein OS=Physcomitrella paten... 46 0.001 tr|A9SML3|A9SML3_PHYPA Predicted protein OS=Physcomitrella paten... 46 0.001 tr|A9SCZ2|A9SCZ2_PHYPA Predicted protein OS=Physcomitrella paten... 46 0.001 tr|A9RF97|A9RF97_PHYPA Predicted protein OS=Physcomitrella paten... 45 0.002 tr|Q5NRP7|Q5NRP7_SOLDE Putative gag-pol polyprotein, identical O... 44 0.005 tr|Q5NRP4|Q5NRP4_SOLDE Putative gag-pol polyprotein, identical O... 44 0.005 tr|A9TCC3|A9TCC3_PHYPA Predicted protein OS=Physcomitrella paten... 44 0.007 tr|A9RMH4|A9RMH4_PHYPA Predicted protein OS=Physcomitrella paten... 44 0.007 tr|A9T0G9|A9T0G9_PHYPA Predicted protein OS=Physcomitrella paten... 43 0.009 tr|A9T722|A9T722_PHYPA Predicted protein OS=Physcomitrella paten... 42 0.021 tr|Q2MJT3|Q2MJT3_PIG Paternally expressed 10 (Fragment) OS=Sus s... 41 0.036 tr|Q0PR72|Q0PR72_PIG Paternal expression 10 OS=Sus scrofa GN=PEG... 41 0.036 tr|A4RGL9|A4RGL9_MAGGR Putative uncharacterized protein OS=Magna... 41 0.036 tr|A9SL48|A9SL48_PHYPA Predicted protein OS=Physcomitrella paten... 41 0.046 tr|Q9XE67|Q9XE67_SORBI Putative uncharacterized protein OS=Sorgh... 40 0.061 tr|A9S4P9|A9S4P9_PHYPA Predicted protein OS=Physcomitrella paten... 40 0.061 tr|A9RQ41|A9RQ41_PHYPA Predicted protein OS=Physcomitrella paten... 40 0.061 tr|A4QY44|A4QY44_MAGGR Putative uncharacterized protein OS=Magna... 40 0.079 tr|A4RLP1|A4RLP1_MAGGR Putative uncharacterized protein OS=Magna... 40 0.10
>tr|A9TM52|A9TM52_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_94546 PE=4 SV=1 Length = 828
Score = 53.1 bits (126), Expect = 9e-06 Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 3/139 (2%) Frame = +1
Query: 40 DGVKMEQFAATLEGKAMSWFNQYGIAHFATYNALKQAFLQRFRKEKTPTDVLRKLRDIKQ 219 +G + F+ TL G+A +W+ + HF T++ L+ FL FR E + LR L ++Q Sbjct: 182 EGYYLVWFSETLHGEAYNWYRDHDEGHFTTWSQLQVTFLNHFRPEVGQSTALRALGAVRQ 241
Query: 220 NK-MLVEDYA*KFRILVERLQGNERPTNEMLAGYFLKGL--RSSLKGAVASIDIAGGLDD 390 + + +Y +F ++ R G + L +F++G +S++KG + LD+ Sbjct: 242 QRDEEMANYIRRFDLVCMRYVGG-LLNGDTLKQFFIEGFANQSTIKGVLERNPAT--LDE 298
Query: 391 LVTAAARVEKRLGMTKAKG 447 T AARV + TKA G Sbjct: 299 AKT-AARVVDLIERTKAVG 316
>tr|A9RZ76|A9RZ76_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_72486 PE=4 SV=1 Length = 750
Score = 52.4 bits (124), Expect = 2e-05 Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 3/109 (2%) Frame = +1
Query: 40 DGVKMEQFAATLEGKAMSWFNQYGIAHFATYNALKQAFLQRFRKEKTPTDVLRKLRDIKQ 219 +G + F+ TL G+A +W+ + HF T++ L+ AFL FR E + LR L ++Q Sbjct: 182 EGYYLVWFSGTLHGEAYNWYRDHDEGHFTTWSQLQVAFLNHFRPEVGQSTTLRALGAVRQ 241
Query: 220 NK-MLVEDYA*KFRILVERLQGNERPTNEMLAGYFLKGL--RSSLKGAV 357 + + +Y +F ++ R G + L +F++G RS++KG + Sbjct: 242 QRDEEMANYIRRFDLVCMRYVGG-LLNGDTLKKFFIEGFANRSTIKGVL 289
>tr|A9U5C4|A9U5C4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_102568 PE=4 SV=1 Length = 673
Score = 52.0 bits (123), Expect = 2e-05 Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 3/129 (2%) Frame = +1
Query: 40 DGVKMEQFAATLEGKAMSWFNQYGIAHFATYNALKQAFLQRFRKEKTPTDVLRKLRDIKQ 219 +G + F TL G+A +W+ + HF T++ L+ AFL FR E + LR L ++Q Sbjct: 182 EGYYLVWFPGTLHGEAYNWYRDHDEGHFTTWSQLQVAFLNHFRPEVGQSTTLRALGAVRQ 241
Query: 220 NK-MLVEDYA*KFRILVERLQGNERPTNEMLAGYFLKGL--RSSLKGAVASIDIAGGLDD 390 + + +Y +F ++ R G + L +F++G RS++KG + L++ Sbjct: 242 QRDEEMANYIRRFDLVCMRYVGG-LLNGDTLKQFFIEGFANRSTIKGVLERNPAT--LEE 298
Query: 391 LVTAAARVE 417 TAA V+ Sbjct: 299 AKTAACVVD 307
>tr|A9SNJ3|A9SNJ3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_81852 PE=4 SV=1 Length = 544
Score = 52.0 bits (123), Expect = 2e-05 Identities = 31/109 (28%), Positives = 58/109 (53%), Gaps = 3/109 (2%) Frame = +1
Query: 40 DGVKMEQFAATLEGKAMSWFNQYGIAHFATYNALKQAFLQRFRKEKTPTDVLRKLRDIKQ 219 +G + F TL G+A +W+ + HF T++ L+ AFL FR+E + LR L ++Q Sbjct: 65 EGYYLVWFPGTLHGEAYNWYRDHDEGHFTTWSQLQVAFLNHFRREVGQSTALRALGAVRQ 124
Query: 220 NK-MLVEDYA*KFRILVERLQGNERPTNEMLAGYFLKGL--RSSLKGAV 357 + + +Y +F ++ R G + + +F++G RS++KG + Sbjct: 125 QRDEEMANYIRRFDLVCMRYVGG-LLNGDRIKQFFIEGFANRSTIKGVL 172
>tr|A9T330|A9T330_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_87437 PE=4 SV=1 Length = 768
Score = 51.6 bits (122), Expect = 3e-05 Identities = 38/135 (28%), Positives = 70/135 (51%), Gaps = 5/135 (3%) Frame = +1
Query: 40 DGVKMEQFAATLEGKAMSWFNQYGIAHFATYNALKQAFLQRFRKEKTPTDVLRKLRDIKQ 219 +G + F+ TL G+A +W+ + HF T++ L+ AFL FR E + L+ L ++Q Sbjct: 182 EGYYLVWFSETLHGEAYNWYQDHDEGHFTTWSQLQVAFLNHFRPEVGQSTALKALGAVRQ 241
Query: 220 NK-MLVEDYA*KFRILVERLQGNERPTNEMLAGYFLKGL--RSSLKGAVASIDIAGGLDD 390 + + +Y +F ++ R G + L +F++G RS++KG + L++ Sbjct: 242 QRDKEMANYIRRFDLVCMRYVGG-LLNGDTLKQFFIEGFANRSTIKGVLERNPAT--LEE 298
Query: 391 LVTAAARVE--KRLG 429 TAA V+ +R+G Sbjct: 299 AKTAARVVDLIERIG 313
>tr|A9RK63|A9RK63_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_67243 PE=4 SV=1 Length = 365
Score = 51.6 bits (122), Expect = 3e-05 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 3/109 (2%) Frame = +1
Query: 40 DGVKMEQFAATLEGKAMSWFNQYGIAHFATYNALKQAFLQRFRKEKTPTDVLRKLRDIKQ 219 +G F+ TL G+A +W+ + HF T++ L+ AFL FR E + LR L ++Q Sbjct: 157 EGYYQVWFSGTLHGEAYNWYRDHDEGHFTTWSQLQVAFLNHFRPEVGQSTALRALGAVRQ 216
Query: 220 NK-MLVEDYA*KFRILVERLQGNERPTNEMLAGYFLKGL--RSSLKGAV 357 + + +Y +F ++ R G + L +F++G RS++KG + Sbjct: 217 QRDEEMANYIMRFDLVCMRYVGG-LLNGDTLKQFFIEGFANRSTIKGVL 264
>tr|A9SC18|A9SC18_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_77320 PE=4 SV=1 Length = 329
Score = 50.4 bits (119), Expect = 6e-05 Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 3/109 (2%) Frame = +1
Query: 40 DGVKMEQFAATLEGKAMSWFNQYGIAHFATYNALKQAFLQRFRKEKTPTDVLRKLRDIKQ 219 +G + F TL G+A +W+ + HF T++ L+ AFL FR E + LR R ++Q Sbjct: 182 EGYYLVWFPGTLHGEAYNWYRDHDEGHFTTWSQLQVAFLNHFRPEVGQSTALRAPRAVRQ 241
Query: 220 NK-MLVEDYA*KFRILVERLQGNERPTNEMLAGYFLKGL--RSSLKGAV 357 + + +Y +F ++ R G + L +F++G RS +KG + Sbjct: 242 ERDEEMANYIKRFDLVCMRYVGG-LLNGDTLKQFFIEGFANRSIIKGVL 289
>tr|A4UVU4|A4UVU4_MACEU Paternally expressed 10 OS=Macropus eugenii GN=PEG10 PE=4 SV=1 Length = 317
Score = 49.7 bits (117), Expect = 1e-04 Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 3/121 (2%) Frame = +1
Query: 73 LEGKAMSWFNQYGIAH---FATYNALKQAFLQRFRKEKTPTDVLRKLRDIKQNKMLVEDY 243 L+G+A W Y + Y A F Q F + RK+R ++Q V DY Sbjct: 122 LKGRAARWATPYLLESSPLLNNYEAFIDEFKQAFEDPQRKEAANRKIRRLRQGLGSVLDY 181
Query: 244 A*KFRILVERLQGNERPTNEMLAGYFLKGLRSSLKGAVASIDIAGGLDDLVTAAARVEKR 423 A FR+ + L NE FL+GL ++ +A +++A L L+ R+E R Sbjct: 182 ASAFRLCAQDLDWNE----PAFIDQFLEGLSDPIQDELARVEVARSLPALINQCLRIEGR 237
Query: 424 L 426 L Sbjct: 238 L 238
>tr|A9T5U6|A9T5U6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_88471 PE=4 SV=1 Length = 732
Score = 48.9 bits (115), Expect = 2e-04 Identities = 22/61 (36%), Positives = 35/61 (57%) Frame = +1
Query: 43 GVKMEQFAATLEGKAMSWFNQYGIAHFATYNALKQAFLQRFRKEKTPTDVLRKLRDIKQN 222 G + F+ TL G+A +W+ + HF T++ L+ AFL FR E + LR LR ++Q Sbjct: 183 GYYLVWFSGTLHGEAYNWYRDHDEGHFTTWSQLQVAFLNHFRPEVGQSTALRALRAVRQQ 242
Query: 223 K 225 + Sbjct: 243 R 243
>tr|A9SXA6|A9SXA6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_85225 PE=4 SV=1 Length = 1173
Score = 48.9 bits (115), Expect = 2e-04 Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 3/129 (2%) Frame = +1
Query: 40 DGVKMEQFAATLEGKAMSWFNQYGIAHFATYNALKQAFLQRFRKEKTPTDVLRKLRDIKQ 219 +G + F TL G+A +W+ HF T++ L+ AFL FR E + LR L ++Q Sbjct: 1034 EGYYLVWFPETLHGEAYNWYWDDDEGHFTTWSQLQVAFLNHFRPEVGQSTALRALGAVRQ 1093
Query: 220 NK-MLVEDYA*KFRILVERLQGNERPTNEMLAGYFLKGL--RSSLKGAVASIDIAGGLDD 390 + + +Y +F ++ R G + L +F++G RS++KG + L++ Sbjct: 1094 QRDEKMANYIRRFDLVCMRYVGG-LLNGDTLKQFFIEGFANRSTIKGVLERNPAT--LEE 1150
Query: 391 LVTAAARVE 417 + TAA V+ Sbjct: 1151 VKTAARVVD 1159
|