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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920130
Clone id YMU001_000133_D05
Library
Length 443
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000133_D05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CAAACTTCTTTCCATTTATGGTGCTACGTGAAAGGTGCTACATGCAACTGTAGCAAGTCG
TGTTGACCTAGTGGCTACATAGCTTATTTTAATTTTTACTTAAAAAAAGGGTGTCTTCAA
GAAACCTTTCGACATATTTTCGCGAGCACTGTTGATAGTGTAGTAGCATAGCCTCTCCCA
CTAACATCATTACGTTGGACTCTTGTGCCATGTTCTTGAAAAAGGGTCTCTTGCCATGCG
ACTGATTCCATGATGGAGCCCAACATTCACTACTATGAAGGAATCCAAACACATGGTATG
ACACTAACAAATAACTAGGGTATACGATCTGTATTGGCATTGTGAAGAGCATAGCGACCT
GAAAACAAGATGACCATCAGAAGCACTGCATGGGAATACATGCTCAAAGCGCAGCCTCAT
GCTTAAGAATCCTAAGAAAATCC
■■Homology search results ■■ -
sp_hit_id Q8G1Z9
Definition sp|Q8G1Z9|BETB_BRUSU Betaine aldehyde dehydrogenase OS=Brucella suis
Align length 66
Score (bit) 33.5
E-value 0.41
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920130|Adiantum capillus-veneris mRNA, clone:
YMU001_000133_D05.
         (443 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8G1Z9|BETB_BRUSU Betaine aldehyde dehydrogenase OS=Brucella ...    33   0.41 
sp|B0CKN3|BETB_BRUSI Betaine aldehyde dehydrogenase OS=Brucella ...    33   0.41 
sp|A5VPA5|BETB_BRUO2 Betaine aldehyde dehydrogenase OS=Brucella ...    33   0.41 
sp|Q8YFY0|BETB_BRUME Betaine aldehyde dehydrogenase OS=Brucella ...    33   0.41 
sp|A9M9H7|BETB_BRUC2 Betaine aldehyde dehydrogenase OS=Brucella ...    33   0.41 
sp|Q57EI0|BETB_BRUAB Betaine aldehyde dehydrogenase OS=Brucella ...    33   0.41 
sp|Q2YMP8|BETB_BRUA2 Betaine aldehyde dehydrogenase OS=Brucella ...    33   0.41 
sp|Q1EHB3|ATS7_RAT A disintegrin and metalloproteinase with thro...    32   1.5  
sp|Q68SA9|ATS7_MOUSE A disintegrin and metalloproteinase with th...    32   1.5  
sp|Q5UY41|Y3100_HALMA UPF0447 protein rrnAC3100 OS=Haloarcula ma...    30   3.4  
sp|A6X2G8|BETB_OCHA4 Betaine aldehyde dehydrogenase OS=Ochrobact...    30   4.5  
sp|Q9UKP4|ATS7_HUMAN A disintegrin and metalloproteinase with th...    30   4.5  
sp|B1WBU8|U639_RAT UPF0639 protein OS=Rattus norvegicus PE=2 SV=1      29   7.7  
sp|Q4R9F7|REXON_MACFA Putative RNA exonuclease NEF-sp OS=Macaca ...    29   7.7  
sp|Q96IC2|REXON_HUMAN Putative RNA exonuclease NEF-sp OS=Homo sa...    29   7.7  
sp|Q332W6|CEMA_LACSA Chloroplast envelope membrane protein OS=La...    29   10.0 
sp|Q7MF13|BETB_VIBVY Betaine aldehyde dehydrogenase OS=Vibrio vu...    29   10.0 
sp|Q8D3K3|BETB_VIBVU Betaine aldehyde dehydrogenase OS=Vibrio vu...    29   10.0 

>sp|Q8G1Z9|BETB_BRUSU Betaine aldehyde dehydrogenase OS=Brucella
           suis GN=betB PE=3 SV=1
          Length = 487

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 20/66 (30%), Positives = 32/66 (48%)
 Frame = -2

Query: 325 VYPSYLLVSYHVFGFLHSSECWAPSWNQSHGKRPFFKNMAQESNVMMLVGEAMLLHYQQC 146
           V+ + L   +HV G + +  CW  ++N +  + PF     ++S +    G A L HY Q 
Sbjct: 416 VFTADLSRGHHVIGQIKAGTCWINAYNLTPVEVPF--GGYKQSGIGRENGIAALAHYSQI 473

Query: 145 SRKYVE 128
              YVE
Sbjct: 474 KTVYVE 479


>sp|B0CKN3|BETB_BRUSI Betaine aldehyde dehydrogenase OS=Brucella
           suis (strain ATCC 23445 / NCTC 10510) GN=betB PE=3 SV=1
          Length = 487

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 20/66 (30%), Positives = 32/66 (48%)
 Frame = -2

Query: 325 VYPSYLLVSYHVFGFLHSSECWAPSWNQSHGKRPFFKNMAQESNVMMLVGEAMLLHYQQC 146
           V+ + L   +HV G + +  CW  ++N +  + PF     ++S +    G A L HY Q 
Sbjct: 416 VFTADLSRGHHVIGQIKAGTCWINAYNLTPVEVPF--GGYKQSGIGRENGIAALAHYSQI 473

Query: 145 SRKYVE 128
              YVE
Sbjct: 474 KTVYVE 479


>sp|A5VPA5|BETB_BRUO2 Betaine aldehyde dehydrogenase OS=Brucella
           ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=betB
           PE=3 SV=1
          Length = 487

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 20/66 (30%), Positives = 32/66 (48%)
 Frame = -2

Query: 325 VYPSYLLVSYHVFGFLHSSECWAPSWNQSHGKRPFFKNMAQESNVMMLVGEAMLLHYQQC 146
           V+ + L   +HV G + +  CW  ++N +  + PF     ++S +    G A L HY Q 
Sbjct: 416 VFTADLSRGHHVIGQIKAGTCWINAYNLTPVEVPF--GGYKQSGIGRENGIAALAHYSQI 473

Query: 145 SRKYVE 128
              YVE
Sbjct: 474 KTVYVE 479


>sp|Q8YFY0|BETB_BRUME Betaine aldehyde dehydrogenase OS=Brucella
           melitensis GN=betB PE=3 SV=2
          Length = 487

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 20/66 (30%), Positives = 32/66 (48%)
 Frame = -2

Query: 325 VYPSYLLVSYHVFGFLHSSECWAPSWNQSHGKRPFFKNMAQESNVMMLVGEAMLLHYQQC 146
           V+ + L   +HV G + +  CW  ++N +  + PF     ++S +    G A L HY Q 
Sbjct: 416 VFTADLSRGHHVIGQIKAGTCWINAYNLTPVEVPF--GGYKQSGIGRENGIAALAHYSQI 473

Query: 145 SRKYVE 128
              YVE
Sbjct: 474 KTVYVE 479


>sp|A9M9H7|BETB_BRUC2 Betaine aldehyde dehydrogenase OS=Brucella
           canis (strain ATCC 23365 / NCTC 10854) GN=betB PE=3 SV=1
          Length = 487

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 20/66 (30%), Positives = 32/66 (48%)
 Frame = -2

Query: 325 VYPSYLLVSYHVFGFLHSSECWAPSWNQSHGKRPFFKNMAQESNVMMLVGEAMLLHYQQC 146
           V+ + L   +HV G + +  CW  ++N +  + PF     ++S +    G A L HY Q 
Sbjct: 416 VFTADLSRGHHVIGQIKAGTCWINAYNLTPVEVPF--GGYKQSGIGRENGIAALAHYSQI 473

Query: 145 SRKYVE 128
              YVE
Sbjct: 474 KTVYVE 479


>sp|Q57EI0|BETB_BRUAB Betaine aldehyde dehydrogenase OS=Brucella
           abortus GN=betB PE=3 SV=1
          Length = 487

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 20/66 (30%), Positives = 32/66 (48%)
 Frame = -2

Query: 325 VYPSYLLVSYHVFGFLHSSECWAPSWNQSHGKRPFFKNMAQESNVMMLVGEAMLLHYQQC 146
           V+ + L   +HV G + +  CW  ++N +  + PF     ++S +    G A L HY Q 
Sbjct: 416 VFTADLSRGHHVIGQIKAGTCWINAYNLTPVEVPF--GGYKQSGIGRENGIAALAHYSQI 473

Query: 145 SRKYVE 128
              YVE
Sbjct: 474 KTVYVE 479


>sp|Q2YMP8|BETB_BRUA2 Betaine aldehyde dehydrogenase OS=Brucella
           abortus (strain 2308) GN=betB PE=3 SV=1
          Length = 487

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 20/66 (30%), Positives = 32/66 (48%)
 Frame = -2

Query: 325 VYPSYLLVSYHVFGFLHSSECWAPSWNQSHGKRPFFKNMAQESNVMMLVGEAMLLHYQQC 146
           V+ + L   +HV G + +  CW  ++N +  + PF     ++S +    G A L HY Q 
Sbjct: 416 VFTADLSRGHHVIGQIKAGTCWINAYNLTPVEVPF--GGYKQSGIGRENGIAALAHYSQI 473

Query: 145 SRKYVE 128
              YVE
Sbjct: 474 KTVYVE 479


>sp|Q1EHB3|ATS7_RAT A disintegrin and metalloproteinase with
           thrombospondin motifs 7 OS=Rattus norvegicus GN=Adamts7
           PE=1 SV=1
          Length = 1595

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = -2

Query: 295 HVFGFLHS---SECWAPSWNQSHGKRPFFKNMAQESNVMMLVGEAMLLHYQQCSRKYVER 125
           H FG  H    ++C      +S GKRPF  +        +L    + L + +CSR+Y+ R
Sbjct: 373 HSFGIQHDGTGNDC------ESIGKRPFIMSP------QLLYDRGIPLTWSRCSREYITR 420

Query: 124 FLE 116
           FL+
Sbjct: 421 FLD 423


>sp|Q68SA9|ATS7_MOUSE A disintegrin and metalloproteinase with
           thrombospondin motifs 7 OS=Mus musculus GN=Adamts7 PE=1
           SV=2
          Length = 1657

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = -2

Query: 295 HVFGFLHS---SECWAPSWNQSHGKRPFFKNMAQESNVMMLVGEAMLLHYQQCSRKYVER 125
           H FG  H    ++C      +S GKRPF  +        +L    + L + +CSR+Y+ R
Sbjct: 376 HSFGIQHDGTGNDC------ESIGKRPFIMSP------QLLYDRGIPLTWSRCSREYITR 423

Query: 124 FLE 116
           FL+
Sbjct: 424 FLD 426


>sp|Q5UY41|Y3100_HALMA UPF0447 protein rrnAC3100 OS=Haloarcula
           marismortui GN=rrnAC3100 PE=3 SV=2
          Length = 669

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -1

Query: 236 WQETLFQEHGTRVQRNDVSGRGYATTLSTVLA 141
           W +T F+E    ++R+   GRGY + +S ++A
Sbjct: 166 WYDTSFEERAAHIKRHGDIGRGYGSEVSQMIA 197
tr_hit_id B2SA42
Definition tr|B2SA42|B2SA42_BRUA1 Aldehyde dehydrogenase OS=Brucella abortus (strain S19)
Align length 66
Score (bit) 33.5
E-value 5.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920130|Adiantum capillus-veneris mRNA, clone:
YMU001_000133_D05.
         (443 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B2SA42|B2SA42_BRUA1 Aldehyde dehydrogenase OS=Brucella abortu...    33   5.4  
tr|Q9U5N8|Q9U5N8_LEIMA Hypothetical STT3 ortholog OS=Leishmania ...    33   9.2  
tr|Q4FX03|Q4FX03_LEIMA Oligosaccharyl transferase-like protein O...    33   9.2  
tr|B6K434|B6K434_SCHJP MAP kinase kinase kinase wis4 OS=Schizosa...    33   9.2  

>tr|B2SA42|B2SA42_BRUA1 Aldehyde dehydrogenase OS=Brucella abortus
           (strain S19) GN=BAbS19_I05370 PE=4 SV=1
          Length = 487

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 20/66 (30%), Positives = 32/66 (48%)
 Frame = -2

Query: 325 VYPSYLLVSYHVFGFLHSSECWAPSWNQSHGKRPFFKNMAQESNVMMLVGEAMLLHYQQC 146
           V+ + L   +HV G + +  CW  ++N +  + PF     ++S +    G A L HY Q 
Sbjct: 416 VFTADLSRGHHVIGQIKAGTCWINAYNLTPVEVPF--GGYKQSGIGRENGIAALAHYSQI 473

Query: 145 SRKYVE 128
              YVE
Sbjct: 474 KTVYVE 479


>tr|Q9U5N8|Q9U5N8_LEIMA Hypothetical STT3 ortholog OS=Leishmania
           major GN=stt3 PE=4 SV=1
          Length = 833

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
 Frame = -2

Query: 376 WSSCFQVAMLFTMPIQIVYPSYLLVSYHVFGFL-HSSECW----APSWNQSHGKRPFF 218
           +SSCF VAM   +PI        + S  V+G+L HSS+ W    A  +  +HG   FF
Sbjct: 53  YSSCFAVAMAIALPIAY---DMRVRSIGVYGYLFHSSDPWFNYRAAEYMSTHGWSAFF 107


>tr|Q4FX03|Q4FX03_LEIMA Oligosaccharyl transferase-like protein
           OS=Leishmania major strain Friedlin GN=LMJ_1046 PE=4
           SV=1
          Length = 790

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
 Frame = -2

Query: 376 WSSCFQVAMLFTMPIQIVYPSYLLVSYHVFGFL-HSSECW----APSWNQSHGKRPFF 218
           +SSCF VAM   +PI        + S  V+G+L HSS+ W    A  +  +HG   FF
Sbjct: 10  YSSCFAVAMAIALPIAY---DMRVRSIGVYGYLFHSSDPWFNYRAAEYMSTHGWSAFF 64


>tr|B6K434|B6K434_SCHJP MAP kinase kinase kinase wis4
            OS=Schizosaccharomyces japonicus yFS275 GN=SJAG_03384
            PE=4 SV=1
          Length = 1301

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 11/70 (15%)
 Frame = -2

Query: 232  KRPF--FKNMAQESNVMMLVGEAMLLHYQ---------QCSRKYVERFLEDTLFLSKN*N 86
            KRP    KN+ QE     L+ E ML H Q         Q  R+++ R L+D++  SK   
Sbjct: 933  KRPLVDLKNLLQEDETTKLLHEEMLSHLQELEECRLAKQTQRQFIGRVLDDSVTASKEFL 992

Query: 85   KLCSH*VNTT 56
            +L S   N T
Sbjct: 993  QLASSLSNIT 1002