BP920132 |
Clone id |
YMU001_000133_D07 |
Library |
YMU01 |
Length |
483 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000133_D07. |
Accession |
BP920132 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL10Contig1 |
Sequence |
GGCACGACAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGG TCCCCTCAATGCTCTAGCGCCCGCACCGGATATGGACCGAACTGTCTCACGACGTTCTGA ACCCAGCTCACGTACCGCTTTAGTGGGCGAACAGCCCAACCCTTGGGACGTACTACCGCC CCAGGTGGCGAATAGCCGACATCGAGGTGCCAAATCTTCCCGTCGATGTGAACTCTTGGG GAAGATCAGCCTGTTATCCCTAGAGTAACTTTTATCCGTTGAGCGACGGCCCTTCCACTT GGAACCGTCGGATCACTAAGGCCGACTTTCGTCCCTGCTCGACTGGTAGGTCTCGCAGTC AAGCTCCCTTCTGCCTTTGCACTCGTAGGCTGATATCCGTCCAGCCTGAGGAAACCTTTG CGCGCCTCCGTTACTCTTTGGGAGGCCTACGCCCCATAGAAACTGTCTACCTGGGACTGT CTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9PLI5 |
Definition |
sp|Q9PLI5|Y114_CHLMU Uncharacterized protein TC_0114 OS=Chlamydia muridarum |
Align length |
80 |
Score (bit) |
88.6 |
E-value |
1.0e-17 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920132|Adiantum capillus-veneris mRNA, clone: YMU001_000133_D07. (468 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9PLI5|Y114_CHLMU Uncharacterized protein TC_0114 OS=Chlamydi... 89 1e-17 sp|P70906|VLP18_BORHE Variable large protein 18 OS=Borrelia herm... 32 1.8 sp|Q250N9|RPOC_DESHY DNA-directed RNA polymerase subunit beta' O... 32 1.8 sp|O94925|GLSK_HUMAN Glutaminase kidney isoform, mitochondrial O... 32 1.8 sp|Q8C7E9|CSTFT_MOUSE Cleavage stimulation factor 64 kDa subunit... 31 2.4 sp|O10312|Y054_NPVOP Uncharacterized 42.5 kDa protein OS=Orgyia ... 31 3.1 sp|Q5SZD1|CF141_HUMAN Uncharacterized protein C6orf141 OS=Homo s... 30 5.3 sp|O69979|LEXA_STRCO LexA repressor OS=Streptomyces coelicolor G... 30 6.8 sp|Q82KE0|LEXA_STRAW LexA repressor OS=Streptomyces avermitilis ... 29 8.9 sp|A6QLH6|NTKL_BOVIN N-terminal kinase-like protein OS=Bos tauru... 29 9.1
>sp|Q9PLI5|Y114_CHLMU Uncharacterized protein TC_0114 OS=Chlamydia muridarum GN=TC_0114 PE=4 SV=2 Length = 122
Score = 88.6 bits (218), Expect = 1e-17 Identities = 45/80 (56%), Positives = 48/80 (60%) Frame = +2
Query: 62 APAPDMDRTVSRRSEPSSRTALVGEQPNPWDVLPPQVANSRHRGAKSSRRCXXXXXXXXX 241 AP D D+TVSRR EPSSRTAL+GEQPNPWD+L PQ A SRHRGAK RR Sbjct: 43 APTKDRDQTVSRRFEPSSRTALIGEQPNPWDLLQPQDAMSRHRGAKPPRRYELLVAISLL 102
Query: 242 XXXXXXXXXRRPFHLEPSDH 301 RR FH P DH Sbjct: 103 SPEYLLSVKRRRFHFPPPDH 122
>sp|P70906|VLP18_BORHE Variable large protein 18 OS=Borrelia hermsii GN=vlp18 PE=3 SV=1 Length = 360
Score = 31.6 bits (70), Expect = 1.8 Identities = 16/40 (40%), Positives = 22/40 (55%) Frame = -2
Query: 386 DGYQPTSAKAEGSLTARPTSRAGTKVGLSDPTVPSGRAVA 267 +G Q A A+G+ TA ++ GTK LS+ P AVA Sbjct: 250 EGDQALGAAADGTTTAMSFAKGGTKDNLSNANTPKAAAVA 289
>sp|Q250N9|RPOC_DESHY DNA-directed RNA polymerase subunit beta' OS=Desulfitobacterium hafniense (strain Y51) GN=rpoC PE=3 SV=1 Length = 1161
Score = 31.6 bits (70), Expect = 1.8 Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 2/38 (5%) Frame = -2
Query: 392 RLDGYQPTSAKAEG--SLTARPTSRAGTKVGLSDPTVP 285 RL GY+ T+ +G SL + ++RAG VGL+D TVP Sbjct: 591 RLGGYKATAQLLDGIKSLGFKYSTRAGMTVGLADITVP 628
>sp|O94925|GLSK_HUMAN Glutaminase kidney isoform, mitochondrial OS=Homo sapiens GN=GLS PE=1 SV=1 Length = 669
Score = 31.6 bits (70), Expect = 1.8 Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 6/67 (8%) Frame = -1
Query: 195 APRCRLFATWGGS------TSQGLGCSPTKAVRELGSERRETVRSISGAGARALRGPFPS 34 A RL WGG ++GL SP++ ++ELG +S A A GP Sbjct: 49 AAAARLHPWWGGGGWPAEPLARGLSSSPSEILQELGKGSTHPQPGVSPPAAPAAPGP--- 105
Query: 33 TRGPGRT 13 GPG T Sbjct: 106 KDGPGET 112
>sp|Q8C7E9|CSTFT_MOUSE Cleavage stimulation factor 64 kDa subunit, tau variant OS=Mus musculus GN=Cstf2t PE=1 SV=2 Length = 632
Score = 31.2 bits (69), Expect = 2.4 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 6/54 (11%) Frame = -1
Query: 165 GGSTSQGLGCSP--TKAVRELGSERRETVRSISGAGARA----LRGPFPSTRGP 22 GG S+G+ P T+ + G ERR ++ G A +RGP PS+RGP Sbjct: 421 GGRESRGMETRPMETEVLEPRGMERRMETCAMETRGMDARGLEMRGPGPSSRGP 474
>sp|O10312|Y054_NPVOP Uncharacterized 42.5 kDa protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=ORF58 PE=4 SV=1 Length = 378
Score = 30.8 bits (68), Expect = 3.1 Identities = 21/68 (30%), Positives = 33/68 (48%) Frame = -2
Query: 302 SDPTVPSGRAVAQRIKVTLGITG*SSPRVHIDGKIWHLDVGYSPPGAVVRPKGWAVRPLK 123 S+P + S + A + TLG + RV+ L G +PPG ++ P V+ + Sbjct: 246 SNPFIISENSSASVVLRTLGKCPDNPERVNC----CKLSYGGAPPGHLMCPPRAIVKKIY 301
Query: 122 RYVSWVQN 99 RYV+W N Sbjct: 302 RYVNWASN 309
>sp|Q5SZD1|CF141_HUMAN Uncharacterized protein C6orf141 OS=Homo sapiens GN=C6orf141 PE=2 SV=2 Length = 244
Score = 30.0 bits (66), Expect = 5.3 Identities = 23/57 (40%), Positives = 25/57 (43%) Frame = -1
Query: 261 DKSYSRDNRLIFPKSSHRREDLAPRCRLFATWGGSTSQGLGCSPTKAVRELGSERRE 91 D S S + FP+ R LAP R AT G S SQG G A R LG E Sbjct: 21 DSSRSLGDLGPFPREVGRGAPLAPGARNPATAGASRSQGGGHEDRTADRALGPRAGE 77
>sp|O69979|LEXA_STRCO LexA repressor OS=Streptomyces coelicolor GN=lexA PE=3 SV=1 Length = 234
Score = 29.6 bits (65), Expect = 6.8 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Frame = -2
Query: 431 ASQRVTEARKGFLRLDGYQPTSAKAEGS---LTARPTSRAGTKVGLSDPTVPSGRAVA 267 A Q + RKGFLR D ++P + + GS + +PT AG P V GR A Sbjct: 68 AHQLMALERKGFLRRDPHRPRAYEVRGSDQAASVQPTDTAGKPAASYVPLV--GRIAA 123
>sp|Q82KE0|LEXA_STRAW LexA repressor OS=Streptomyces avermitilis GN=lexA PE=3 SV=2 Length = 234
Score = 29.3 bits (64), Expect = 8.9 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Frame = -2
Query: 431 ASQRVTEARKGFLRLDGYQPTSAKAEG---SLTARPTSRAGTKVGLSDPTVPSGRAVA 267 A Q + RKGFLR D ++P + + G S + +PT AG P V GR A Sbjct: 68 AHQLMALERKGFLRRDPHRPRAYEVRGSDQSSSVQPTDTAGKPAASYVPLV--GRIAA 123
>sp|A6QLH6|NTKL_BOVIN N-terminal kinase-like protein OS=Bos taurus GN=SCYL1 PE=2 SV=1 Length = 807
Score = 29.3 bits (64), Expect = 9.1 Identities = 39/150 (26%), Positives = 53/150 (35%), Gaps = 8/150 (5%) Frame = -1
Query: 468 ETVPGRQFLWGVGLPKSNGGAQRFP----QAGRISAYECKGRRELDC-ETYQXXXXXXXX 304 E+V ++ W G S G P Q S++E +G E D E Sbjct: 657 ESVLAQRDDWSTGNQASRAGQASNPGHRSQESDWSSWEAEGSWEQDWQEPSPPAPPPEGT 716
Query: 303 XXXXXSKWKGRRSTDKSYSRDNRLIFPKSSHRREDLAPRCRLFATWGGSTSQGLGCSPTK 124 W G +DK Y F S RE A R +WG +GL + Sbjct: 717 RLASEYNWGGPEPSDKGYP------FAALSVHREAGAQSRR--DSWGDDNWEGLETESRQ 768
Query: 123 AVRELGSERRETVR---SISGAGARALRGP 43 A EL ++RE R A +A +GP Sbjct: 769 AKAELARKKREERRREMEAKRAEKKAAKGP 798
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q4EE25 |
Definition |
tr|Q4EE25|Q4EE25_LISMO Putative uncharacterized protein OS=Listeria monocytogenes str. 4b H7858 |
Align length |
111 |
Score (bit) |
177.0 |
E-value |
2.0e-43 |
Report |
|