BP920134
Clone id YMU001_000133_D09
Library
Length 366
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000133_D09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
ACCTGCAGGTACTCAGGCATCAGTGAGATACCACTCTAGAAGAACTAGAATTCTAACCTT
GTGTCAAGAATTACGGAGCAAGAGACAGTCCCAGGTAGACAGTTTCTATGGGGCGTAGGT
CTCCCAAAGAGTAACGGAGGCGCGCAAAGGTTTCCTCAGGCTGGACGGAAATCAGCCTAC
GAGTGCAAAGGCAGAAGGGAGCTTGACTGCGAGACCTACCAGTCGAGCAGGGACGAAAGT
CGGCCTTAGTGATCCGACGGTTCCAAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTAC
TCTAGGGATAACAGGCTGATCTTCCCCAAGAGTTCACATCGACGGGAAGGTTTGGCACCT
CGATGT
■■Homology search results ■■ -
sp_hit_id P70906
Definition sp|P70906|VLP18_BORHE Variable large protein 18 OS=Borrelia hermsii
Align length 40
Score (bit) 33.1
E-value 0.44
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920134|Adiantum capillus-veneris mRNA, clone:
YMU001_000133_D09.
(366 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P70906|VLP18_BORHE Variable large protein 18 OS=Borrelia herm... 33 0.44
sp|Q4U0G1|CLAP1_XENLA CLIP-associating protein 1 OS=Xenopus laev... 31 2.2
sp|Q9PLI5|Y114_CHLMU Uncharacterized protein TC_0114 OS=Chlamydi... 30 4.9
sp|Q5F3G0|RHG19_CHICK Rho GTPase-activating protein 19 OS=Gallus... 30 4.9
sp|P30924|GLGB_SOLTU 1,4-alpha-glucan-branching enzyme OS=Solanu... 30 4.9
sp|A0PT76|LEXA_MYCUA LexA repressor OS=Mycobacterium ulcerans (s... 29 6.4
sp|P20814|CP2CD_RAT Cytochrome P450 2C13, male-specific OS=Rattu... 29 6.4
sp|A0LUZ1|LEXA_ACIC1 LexA repressor OS=Acidothermus cellulolytic... 29 8.4

>sp|P70906|VLP18_BORHE Variable large protein 18 OS=Borrelia hermsii
GN=vlp18 PE=3 SV=1
Length = 360

Score = 33.1 bits (74), Expect = 0.44
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2

Query: 164 DGNQPTSAKAEGSLTARPTSRAGTKVGLSDPTVPSGRAVA 283
+G+Q A A+G+ TA ++ GTK LS+ P AVA
Sbjct: 250 EGDQALGAAADGTTTAMSFAKGGTKDNLSNANTPKAAAVA 289


>sp|Q4U0G1|CLAP1_XENLA CLIP-associating protein 1 OS=Xenopus laevis
GN=clasp1 PE=2 SV=1
Length = 1468

Score = 30.8 bits (68), Expect = 2.2
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2

Query: 161 LDGNQPTSAKAEGSLTARPTSRAGTKVGLSDPTVPSGRA 277
+DGN+P+SA + S A T+R G +G + PS A
Sbjct: 247 VDGNRPSSASSSASSKAPQTARRGVSLGTARRPGPSSAA 285


>sp|Q9PLI5|Y114_CHLMU Uncharacterized protein TC_0114 OS=Chlamydia
muridarum GN=TC_0114 PE=4 SV=2
Length = 122

Score = 29.6 bits (65), Expect = 4.9
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -2

Query: 365 HRGAKPSRRCXXXXXXXXXXXXXXXXXERRPFHLEPSDH 249
HRGAKP RR +RR FH P DH
Sbjct: 84 HRGAKPPRRYELLVAISLLSPEYLLSVKRRRFHFPPPDH 122


>sp|Q5F3G0|RHG19_CHICK Rho GTPase-activating protein 19 OS=Gallus
gallus GN=ARHGAP19 PE=2 SV=1
Length = 495

Score = 29.6 bits (65), Expect = 4.9
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2

Query: 65 QELRSKRQSQVDSFYGA*VSQRVTEARKGFLRLDGNQPTSAK 190
Q L+S+++S++DS + QR EA + R N P SAK
Sbjct: 342 QPLKSQKRSRLDSCHQEETQQRTEEALRELFRHVHNMPDSAK 383


>sp|P30924|GLGB_SOLTU 1,4-alpha-glucan-branching enzyme OS=Solanum
tuberosum GN=SBE1 PE=2 SV=2
Length = 861

Score = 29.6 bits (65), Expect = 4.9
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2

Query: 44 TRILTLCQELRSKRQSQVDSFYGA*VSQRVTEARK 148
T ++ CQ+L+ RQ+ V S+Y +S+RVT K
Sbjct: 776 TELMNACQKLKITRQTFVVSYYQQPISRRVTRNLK 810


>sp|A0PT76|LEXA_MYCUA LexA repressor OS=Mycobacterium ulcerans
(strain Agy99) GN=lexA PE=3 SV=1
Length = 244

Score = 29.3 bits (64), Expect = 6.4
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +2

Query: 134 TEARKGFLRLDGNQPTSAKAEG---SLTARPTSRAGTKVGLSDPT 259
T RKG+LR D N+P + G ++TA P + L +PT
Sbjct: 79 TLERKGYLRRDPNRPRAVDVRGADDTVTAAPVTDVAGSDALPEPT 123


>sp|P20814|CP2CD_RAT Cytochrome P450 2C13, male-specific OS=Rattus
norvegicus GN=Cyp2c13 PE=1 SV=1
Length = 490

Score = 29.3 bits (64), Expect = 6.4
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2

Query: 155 GNLCAPPLLFGRPTPHRNCLPGTVSCSVILDTRLEF 48
G+ C P + G C PG V CS+IL R ++
Sbjct: 161 GSPCDPQFIMG-------CAPGNVICSIILQNRFDY 189


>sp|A0LUZ1|LEXA_ACIC1 LexA repressor OS=Acidothermus cellulolyticus
(strain ATCC 43068 / 11B) GN=lexA PE=3 SV=1
Length = 275

Score = 28.9 bits (63), Expect = 8.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2

Query: 143 RKGFLRLDGNQPTSAKAEGSLTARPTSRAG 232
RKGFLR D N+P + + + +A P + AG
Sbjct: 97 RKGFLRRDPNRPRAVEIRSAESAVPDASAG 126


tr_hit_id A0Q208
Definition tr|A0Q208|A0Q208_CLONN Putative uncharacterized protein OS=Clostridium novyi (strain NT)
Align length 94
Score (bit) 138.0
E-value 2.0e-31
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920134|Adiantum capillus-veneris mRNA, clone:
YMU001_000133_D09.
(366 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A0Q208|A0Q208_CLONN Putative uncharacterized protein OS=Clost... 138 2e-31
tr|A0PXN7|A0PXN7_CLONN Putative uncharacterized protein OS=Clost... 138 2e-31
tr|B1BEF3|B1BEF3_CLOBO Putative uncharacterized protein (Fragmen... 138 2e-31
tr|B1BEE0|B1BEE0_CLOBO Putative uncharacterized protein OS=Clost... 138 2e-31
tr|B1BE06|B1BE06_CLOBO Putative uncharacterized protein OS=Clost... 138 2e-31
tr|B1C1N3|B1C1N3_9FIRM Putative uncharacterized protein OS=Clost... 137 4e-31
tr|B1QFN6|B1QFN6_CLOBO Putative uncharacterized protein OS=Clost... 134 2e-30
tr|B1QFL7|B1QFL7_CLOBO Putative uncharacterized protein (Fragmen... 134 2e-30
tr|B1RTR7|B1RTR7_CLOPE Putative uncharacterized protein OS=Clost... 134 3e-30
tr|B1RKU9|B1RKU9_CLOPE Putative uncharacterized protein OS=Clost... 134 3e-30
tr|B1RCB4|B1RCB4_CLOPE Putative uncharacterized protein OS=Clost... 134 3e-30
tr|B1BTI8|B1BTI8_CLOPE Putative uncharacterized protein OS=Clost... 134 3e-30
tr|B1BLN6|B1BLN6_CLOPE Putative uncharacterized protein OS=Clost... 134 3e-30
tr|B1BEX7|B1BEX7_CLOPE Putative uncharacterized protein OS=Clost... 134 3e-30
tr|A8R9P5|A8R9P5_9FIRM Putative uncharacterized protein OS=Eubac... 132 9e-30
tr|Q877Q8|Q877Q8_CLOTE Putative uncharacterized protein OS=Clost... 130 3e-29
tr|A7DZU9|A7DZU9_CLOSP Hypothetical CTC00065-like protein OS=Clo... 130 3e-29
tr|B0A9C5|B0A9C5_9CLOT Putative uncharacterized protein OS=Clost... 124 2e-27
tr|B0A7G5|B0A7G5_9CLOT Putative uncharacterized protein OS=Clost... 124 2e-27
tr|B5HM15|B5HM15_9ACTO Putative uncharacterized protein OS=Strep... 122 7e-27
tr|B5G7E4|B5G7E4_9ACTO Putative uncharacterized protein OS=Strep... 122 7e-27
tr|B4V362|B4V362_9ACTO Putative uncharacterized protein OS=Strep... 120 3e-26
tr|Q3BKH9|Q3BKH9_9PROT Putative uncharacterized protein OS=Magne... 110 4e-23
tr|A5ZQM3|A5ZQM3_9FIRM Putative uncharacterized protein OS=Rumin... 108 1e-22
tr|Q4EE25|Q4EE25_LISMO Putative uncharacterized protein OS=Liste... 108 1e-22
tr|A9FW92|A9FW92_9RHOB Putative uncharacterized protein OS=Phaeo... 108 2e-22
tr|Q1MP74|Q1MP74_LAWIP Putative uncharacterized protein LI1149 O... 104 3e-21
tr|Q5ZY04|Q5ZY04_LEGPH Hypothetical CTC00065, TC0129 OS=Legionel... 102 1e-20
tr|A5ZYV5|A5ZYV5_9FIRM Putative uncharacterized protein (Fragmen... 102 1e-20
tr|A6FJV3|A6FJV3_9RHOB Putative uncharacterized protein OS=Roseo... 98 2e-19

>tr|A0Q208|A0Q208_CLONN Putative uncharacterized protein
OS=Clostridium novyi (strain NT) GN=NT01CX_0152 PE=4
SV=1
Length = 213

Score = 138 bits (347), Expect = 2e-31
Identities = 67/94 (71%), Positives = 73/94 (77%)
Frame = -3

Query: 364 IEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSQAPFCLC 185
IEVPNLPVDV+SWGRSACYP +FYPLSDGPS N RITK DFRPCST RSQAPFCLC
Sbjct: 6 IEVPNLPVDVDSWGRSACYPRGSFYPLSDGPSIQNHRITKPDFRPCSTCMCRSQAPFCLC 65

Query: 184 TRRLISVQPEETFARLRYSLGDLRPIETVYLGLS 83
T R IS + E TF RLRY LG RP +T +L +S
Sbjct: 66 TLRAISDRAEGTFGRLRYLLGGDRPSQTAHLAMS 99


>tr|A0PXN7|A0PXN7_CLONN Putative uncharacterized protein
OS=Clostridium novyi (strain NT) GN=NT01CX_0251 PE=4
SV=1
Length = 213

Score = 138 bits (347), Expect = 2e-31
Identities = 67/94 (71%), Positives = 73/94 (77%)
Frame = -3

Query: 364 IEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSQAPFCLC 185
IEVPNLPVDV+SWGRSACYP +FYPLSDGPS N RITK DFRPCST RSQAPFCLC
Sbjct: 6 IEVPNLPVDVDSWGRSACYPRGSFYPLSDGPSIQNHRITKPDFRPCSTCMCRSQAPFCLC 65

Query: 184 TRRLISVQPEETFARLRYSLGDLRPIETVYLGLS 83
T R IS + E TF RLRY LG RP +T +L +S
Sbjct: 66 TLRAISDRAEGTFGRLRYLLGGDRPSQTAHLAMS 99


>tr|B1BEF3|B1BEF3_CLOBO Putative uncharacterized protein (Fragment)
OS=Clostridium botulinum C str. Eklund GN=CBC_A1887 PE=4
SV=1
Length = 107

Score = 138 bits (347), Expect = 2e-31
Identities = 67/94 (71%), Positives = 73/94 (77%)
Frame = -3

Query: 364 IEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSQAPFCLC 185
IEVPNLPVDV+SWGRSACYP +FYPLSDGPS N RITK DFRPCST RSQAPFCLC
Sbjct: 6 IEVPNLPVDVDSWGRSACYPRGSFYPLSDGPSIQNHRITKPDFRPCSTCMCRSQAPFCLC 65

Query: 184 TRRLISVQPEETFARLRYSLGDLRPIETVYLGLS 83
T R IS + E TF RLRY LG RP +T +L +S
Sbjct: 66 TLRAISDRAEGTFGRLRYLLGGDRPSQTAHLAMS 99


>tr|B1BEE0|B1BEE0_CLOBO Putative uncharacterized protein
OS=Clostridium botulinum C str. Eklund GN=CBC_A1890 PE=4
SV=1
Length = 210

Score = 138 bits (347), Expect = 2e-31
Identities = 67/94 (71%), Positives = 73/94 (77%)
Frame = -3

Query: 364 IEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSQAPFCLC 185
IEVPNLPVDV+SWGRSACYP +FYPLSDGPS N RITK DFRPCST RSQAPFCLC
Sbjct: 6 IEVPNLPVDVDSWGRSACYPRGSFYPLSDGPSIQNHRITKPDFRPCSTCMCRSQAPFCLC 65

Query: 184 TRRLISVQPEETFARLRYSLGDLRPIETVYLGLS 83
T R IS + E TF RLRY LG RP +T +L +S
Sbjct: 66 TLRAISDRAEGTFGRLRYLLGGDRPSQTAHLAMS 99


>tr|B1BE06|B1BE06_CLOBO Putative uncharacterized protein
OS=Clostridium botulinum C str. Eklund GN=CBC_0392 PE=4
SV=1
Length = 213

Score = 138 bits (347), Expect = 2e-31
Identities = 67/94 (71%), Positives = 73/94 (77%)
Frame = -3

Query: 364 IEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSQAPFCLC 185
IEVPNLPVDV+SWGRSACYP +FYPLSDGPS N RITK DFRPCST RSQAPFCLC
Sbjct: 6 IEVPNLPVDVDSWGRSACYPRGSFYPLSDGPSIQNHRITKPDFRPCSTCMCRSQAPFCLC 65

Query: 184 TRRLISVQPEETFARLRYSLGDLRPIETVYLGLS 83
T R IS + E TF RLRY LG RP +T +L +S
Sbjct: 66 TLRAISDRAEGTFGRLRYLLGGDRPSQTAHLAMS 99


>tr|B1C1N3|B1C1N3_9FIRM Putative uncharacterized protein
OS=Clostridium spiroforme DSM 1552 GN=CLOSPI_01140 PE=4
SV=1
Length = 100

Score = 137 bits (344), Expect = 4e-31
Identities = 67/92 (72%), Positives = 73/92 (79%)
Frame = -3

Query: 358 VPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSQAPFCLCTR 179
+PNLPVDVNSWGRSACYP +FYPLSDG S +RRITK DFRPCST SRSQ PFCLCT
Sbjct: 1 MPNLPVDVNSWGRSACYPQGSFYPLSDGLSIQHRRITKPDFRPCSTCWSRSQTPFCLCTL 60

Query: 178 RLISVQPEETFARLRYSLGDLRPIETVYLGLS 83
RLIS+Q E F RLRYSLG RP +T +L LS
Sbjct: 61 RLISIQAEGIFGRLRYSLGGDRPSQTAHLTLS 92


>tr|B1QFN6|B1QFN6_CLOBO Putative uncharacterized protein
OS=Clostridium botulinum NCTC 2916 GN=CBN_0042 PE=4 SV=1
Length = 218

Score = 134 bits (337), Expect = 2e-30
Identities = 66/94 (70%), Positives = 72/94 (76%)
Frame = -3

Query: 364 IEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSQAPFCLC 185
IEVPNLPVDV+SWGRSACYP +FYPLSDGP T RITK DFRPCST RSQAPFCLC
Sbjct: 6 IEVPNLPVDVDSWGRSACYPRGSFYPLSDGPPTRYHRITKPDFRPCSTCMCRSQAPFCLC 65

Query: 184 TRRLISVQPEETFARLRYSLGDLRPIETVYLGLS 83
T R IS + E TF RLRY LG RP +T +L +S
Sbjct: 66 TLRAISDRAEGTFGRLRYFLGGDRPSQTAHLTMS 99


>tr|B1QFL7|B1QFL7_CLOBO Putative uncharacterized protein (Fragment)
OS=Clostridium botulinum NCTC 2916 GN=CBN_0002 PE=4 SV=1
Length = 184

Score = 134 bits (337), Expect = 2e-30
Identities = 66/94 (70%), Positives = 72/94 (76%)
Frame = -3

Query: 364 IEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSQAPFCLC 185
IEVPNLPVDV+SWGRSACYP +FYPLSDGP T RITK DFRPCST RSQAPFCLC
Sbjct: 6 IEVPNLPVDVDSWGRSACYPRGSFYPLSDGPPTRYHRITKPDFRPCSTCMCRSQAPFCLC 65

Query: 184 TRRLISVQPEETFARLRYSLGDLRPIETVYLGLS 83
T R IS + E TF RLRY LG RP +T +L +S
Sbjct: 66 TLRAISDRAEGTFGRLRYFLGGDRPSQTAHLTMS 99


>tr|B1RTR7|B1RTR7_CLOPE Putative uncharacterized protein
OS=Clostridium perfringens NCTC 8239 GN=AC7_A0024 PE=4
SV=1
Length = 218

Score = 134 bits (336), Expect = 3e-30
Identities = 66/94 (70%), Positives = 72/94 (76%)
Frame = -3

Query: 364 IEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSQAPFCLC 185
IEVPNLPVDV+SWGRSACYP +FYPLSDGP T RITK DFRPCST RSQAPFCLC
Sbjct: 6 IEVPNLPVDVDSWGRSACYPRGSFYPLSDGPPTRYHRITKPDFRPCSTCGCRSQAPFCLC 65

Query: 184 TRRLISVQPEETFARLRYSLGDLRPIETVYLGLS 83
T R IS + E TF RLRY LG RP +T +L +S
Sbjct: 66 TLRTISDRSEGTFGRLRYFLGGDRPSQTAHLTMS 99


>tr|B1RKU9|B1RKU9_CLOPE Putative uncharacterized protein
OS=Clostridium perfringens CPE str. F4969 GN=AC5_A0033
PE=4 SV=1
Length = 218

Score = 134 bits (336), Expect = 3e-30
Identities = 66/94 (70%), Positives = 72/94 (76%)
Frame = -3

Query: 364 IEVPNLPVDVNSWGRSACYP*SNFYPLSDGPSTWNRRITKADFRPCSTGRSRSQAPFCLC 185
IEVPNLPVDV+SWGRSACYP +FYPLSDGP T RITK DFRPCST RSQAPFCLC
Sbjct: 6 IEVPNLPVDVDSWGRSACYPRGSFYPLSDGPPTRYHRITKPDFRPCSTCGCRSQAPFCLC 65

Query: 184 TRRLISVQPEETFARLRYSLGDLRPIETVYLGLS 83
T R IS + E TF RLRY LG RP +T +L +S
Sbjct: 66 TLRTISDRSEGTFGRLRYFLGGDRPSQTAHLTMS 99