BP920143
Clone id YMU001_000133_E07
Library
Length 533
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000133_E07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CACAAGAACACATGAATTCACATTGCACAAAGTTCACAGGTTTCACAATTAGATCACAAA
GAGTTCGCATTGAGTTTATATTCAATTCAATTTACAAACAGGTTGTAGTGACATCCCTCC
ACCACCACCGATTCATACCAATGATCAATCCCTTCTTGTGGGCGAGGTGCCATCTAGTGA
TACATTCAAAAGACCCTCATCCTAGCTTGCCCAATCCTTAGAGACCCTTATTCACTTCTT
TGTAGACTCTCTCAAAACGACGTTGCTTTTCTGCTTTTGTATGGATGATATCTTTCTCCA
GCTATTATGTGCCGTTCTTCGACTAGTTTTAGTCGCATGCCTTCTGTGCACTTGCTGGGC
ATTGAGTTATGGCCAACTCATTGTGCCTTTATTAAGGGATTTCCCTCAGATTCCCACCAC
TTCTTTACTTTTGCATAGTTGTATGCTCCTTTGAGTATGCAAGGCCAGTAATATACAGAA
TTCTTTTGAGTGTGTACCACCACTTTGGGTCTCGTTACTTTGAAAAATTAAAG
■■Homology search results ■■ -
sp_hit_id Q6ZR54
Definition sp|Q6ZR54|YN009_HUMAN Putative uncharacterized protein FLJ46641 OS=Homo sapiens
Align length 30
Score (bit) 31.6
E-value 2.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920143|Adiantum capillus-veneris mRNA, clone:
YMU001_000133_E07.
(533 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6ZR54|YN009_HUMAN Putative uncharacterized protein FLJ46641 ... 32 2.5
sp|Q1RI78|RICKA_RICBR Arp2/3 complex-activating protein rickA OS... 27 5.9
sp|Q20657|STO3_CAEEL Stomatin-3 OS=Caenorhabditis elegans GN=sto... 30 9.5

>sp|Q6ZR54|YN009_HUMAN Putative uncharacterized protein FLJ46641
OS=Homo sapiens PE=2 SV=1
Length = 194

Score = 31.6 bits (70), Expect = 2.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2

Query: 92 LQTGCSDIPPPPPIHTNDQSLLVGEVPSSD 181
L G SD PPPP H + Q +G+VP ++
Sbjct: 61 LSPGGSDPPPPPRAHVSPQEAPLGQVPGAE 90


>sp|Q1RI78|RICKA_RICBR Arp2/3 complex-activating protein rickA
OS=Rickettsia bellii (strain RML369-C) GN=rickA PE=3
SV=1
Length = 518

Score = 26.6 bits (57), Expect(2) = 5.9
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2

Query: 89 NLQTGCSDIPPPPP 130
N++T S++PPPPP
Sbjct: 374 NVETAASNVPPPPP 387



Score = 21.9 bits (45), Expect(2) = 5.9
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +2

Query: 110 DIPPPPPIHTN 142
++PPPPP+ N
Sbjct: 394 NVPPPPPVGDN 404


>sp|Q20657|STO3_CAEEL Stomatin-3 OS=Caenorhabditis elegans GN=sto-3
PE=2 SV=1
Length = 267

Score = 29.6 bits (65), Expect = 9.5
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3

Query: 294 FSSYYVP-FFD*F*SHAFCALAGH*VMANSLCLY*GISLRFPPLLYFCIVVCSFEYARPV 470
+ YY P FFD F AL +C + + L FP ++FC+ + EY R V
Sbjct: 6 YQKYYTPTFFD------FVAL---------ICAWAFLLLTFPVSIFFCVKIVK-EYDRMV 49

Query: 471 IYRI 482
I+R+
Sbjct: 50 IFRL 53


tr_hit_id A7T5Y2
Definition tr|A7T5Y2|A7T5Y2_NEMVE Predicted protein OS=Nematostella vectensis
Align length 35
Score (bit) 34.7
E-value 3.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920143|Adiantum capillus-veneris mRNA, clone:
YMU001_000133_E07.
(533 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7T5Y2|A7T5Y2_NEMVE Predicted protein OS=Nematostella vectens... 35 3.2
tr|A7SWR9|A7SWR9_NEMVE Predicted protein OS=Nematostella vectens... 35 3.2
tr|Q5CHL3|Q5CHL3_CRYHO Hydroxyproline-rich glycoprotein dz-hrgp ... 34 4.1

>tr|A7T5Y2|A7T5Y2_NEMVE Predicted protein OS=Nematostella vectensis
GN=v1g147236 PE=4 SV=1
Length = 256

Score = 34.7 bits (78), Expect = 3.2
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +3

Query: 378 SLCLY*GISLRFPPLLYFCIVVCSFEYARPVIYRI 482
++C Y G+ FP L+FC+ V S EY R VI+RI
Sbjct: 9 TICCYIGVICTFPFSLFFCLKVVS-EYERAVIFRI 42


>tr|A7SWR9|A7SWR9_NEMVE Predicted protein OS=Nematostella vectensis
GN=v1g218685 PE=4 SV=1
Length = 257

Score = 34.7 bits (78), Expect = 3.2
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +3

Query: 378 SLCLY*GISLRFPPLLYFCIVVCSFEYARPVIYRI 482
++C Y G+ FP L+FC+ V S EY R VI+RI
Sbjct: 9 TICCYIGVICTFPFSLFFCLKVVS-EYERAVIFRI 42


>tr|Q5CHL3|Q5CHL3_CRYHO Hydroxyproline-rich glycoprotein dz-hrgp
OS=Cryptosporidium hominis GN=Chro.60453 PE=4 SV=1
Length = 328

Score = 34.3 bits (77), Expect = 4.1
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2

Query: 95 QTGCSDIPPPPPIHTNDQSLLVGEVPSSDTFKRP 196
Q G S PPPPP+ SL + + PS+D F P
Sbjct: 196 QQGGSGFPPPPPLPPTPPSLPLSQTPSNDDFPPP 229