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NBDC - LSDB Archive
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BP920145
Clone id YMU001_000133_E11
Library
Length 274
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000133_E11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TCATTGCGGACCCCTCGACGGCATCGCACGTGCGCAAATTTCACCTCTCCTCAAGCTTTC
TTCCCTGCATTTGTGAAGTCCATAATCAAGATGGCCAACATTGGTGTCATCACTGGATCT
AGTCCTCTTGGTGAGGTAAGATTCAAATGCAATGTCTCCAATGGCCATGTTCACACTAGT
GGAAAGCCGGCGGACCCAGCACGAAGGCAGCCGGCGACAAAGTCGAGGCTTCCGGTGAAA
CCTCCGGTGGTACCTGTGCCATTGACGGGCCATG
■■Homology search results ■■ -
sp_hit_id Q01548
Definition sp|Q01548|PER2_HORVU Peroxidase 2 (Fragment) OS=Hordeum vulgare
Align length 65
Score (bit) 45.4
E-value 9.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920145|Adiantum capillus-veneris mRNA, clone:
YMU001_000133_E11.
         (274 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q01548|PER2_HORVU Peroxidase 2 (Fragment) OS=Hordeum vulgare ...    45   9e-05
sp|Q9FG34|PER54_ARATH Peroxidase 54 OS=Arabidopsis thaliana GN=P...    44   3e-04
sp|Q9SY33|PER7_ARATH Peroxidase 7 OS=Arabidopsis thaliana GN=PER...    42   0.001
sp|Q9LEH3|PER15_IPOBA Peroxidase 15 OS=Ipomoea batatas GN=pod PE...    38   0.014
sp|P37834|PER1_ORYSJ Peroxidase 1 OS=Oryza sativa subsp. japonic...    37   0.024
sp|Q9LDA4|PER38_ARATH Peroxidase 38 OS=Arabidopsis thaliana GN=P...    37   0.031
sp|P17180|PER3_ARMRU Peroxidase C3 OS=Armoracia rusticana GN=PRX...    36   0.068
sp|P00433|PER1A_ARMRU Peroxidase C1A OS=Armoracia rusticana GN=P...    36   0.068
sp|A5H453|PER42_MAIZE Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1     35   0.089
sp|P15233|PER1C_ARMRU Peroxidase C1C (Fragment) OS=Armoracia rus...    35   0.089
sp|Q9SI16|PER15_ARATH Peroxidase 15 OS=Arabidopsis thaliana GN=P...    35   0.089
sp|Q9LXG3|PER56_ARATH Peroxidase 56 OS=Arabidopsis thaliana GN=P...    35   0.12 
sp|O23237|PER49_ARATH Peroxidase 49 OS=Arabidopsis thaliana GN=P...    35   0.12 
sp|P15232|PER1B_ARMRU Peroxidase C1B OS=Armoracia rusticana GN=P...    35   0.12 
sp|Q9SI17|PER14_ARATH Peroxidase 14 OS=Arabidopsis thaliana GN=P...    35   0.12 
sp|Q9FJZ9|PER72_ARATH Peroxidase 72 OS=Arabidopsis thaliana GN=P...    34   0.20 
sp|Q9FKA4|PER62_ARATH Peroxidase 62 OS=Arabidopsis thaliana GN=P...    34   0.20 
sp|Q96522|PER45_ARATH Peroxidase 45 OS=Arabidopsis thaliana GN=P...    34   0.20 
sp|Q9SD46|PER36_ARATH Peroxidase 36 OS=Arabidopsis thaliana GN=P...    34   0.26 
sp|Q43387|PER71_ARATH Peroxidase 71 OS=Arabidopsis thaliana GN=P...    33   0.34 
sp|O80912|PER23_ARATH Peroxidase 23 OS=Arabidopsis thaliana GN=P...    33   0.34 
sp|Q9SLH7|PER20_ARATH Peroxidase 20 OS=Arabidopsis thaliana GN=P...    33   0.34 
sp|O23044|PER3_ARATH Peroxidase 3 OS=Arabidopsis thaliana GN=PER...    33   0.44 
sp|Q9SMU8|PER34_ARATH Peroxidase 34 OS=Arabidopsis thaliana GN=P...    33   0.44 
sp|P24101|PER33_ARATH Peroxidase 33 OS=Arabidopsis thaliana GN=P...    33   0.44 
sp|P24102|PER22_ARATH Peroxidase 22 OS=Arabidopsis thaliana GN=P...    33   0.44 
sp|Q05855|PER1_WHEAT Peroxidase OS=Triticum aestivum PE=2 SV=1         33   0.44 
sp|Q9FX85|PER10_ARATH Peroxidase 10 OS=Arabidopsis thaliana GN=P...    33   0.44 
sp|Q9LVL1|PER68_ARATH Peroxidase 68 OS=Arabidopsis thaliana GN=P...    33   0.58 
sp|Q9LHB9|PER32_ARATH Peroxidase 32 OS=Arabidopsis thaliana GN=P...    33   0.58 

>sp|Q01548|PER2_HORVU Peroxidase 2 (Fragment) OS=Hordeum vulgare
           PE=2 SV=1
          Length = 170

 Score = 45.4 bits (106), Expect = 9e-05
 Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
 Frame = +1

Query: 13  PRRHRTCANFTSPQ-AFFPAFVKSIIKMANIGVITGSSPLGEVRFKCNVSNGHVHTSGKP 189
           P   R    F+  Q AFF  F +S+ KM+N+ ++TG+   GE+R  C V N  V TS +P
Sbjct: 105 PTTKRMATRFSLNQGAFFEQFARSMTKMSNMDILTGTK--GEIRNNCAVPNRRVRTS-RP 161

Query: 190 ADPAR 204
             PAR
Sbjct: 162 PSPAR 166


>sp|Q9FG34|PER54_ARATH Peroxidase 54 OS=Arabidopsis thaliana
           GN=PER54 PE=2 SV=1
          Length = 358

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 25/44 (56%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
 Frame = +1

Query: 37  NFTSPQA-FFPAFVKSIIKMANIGVITGSSPLGEVRFKCNVSNG 165
           +F S Q  FF AFV+S+IKM NI  +TGSS  GE+R  C V NG
Sbjct: 294 SFASNQTLFFEAFVQSMIKMGNISPLTGSS--GEIRQDCKVVNG 335


>sp|Q9SY33|PER7_ARATH Peroxidase 7 OS=Arabidopsis thaliana GN=PER7
           PE=2 SV=1
          Length = 349

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = +1

Query: 46  SPQAFFPAFVKSIIKMANIGVITGSSPLGEVRFKCNVSNGHVH 174
           SPQ F   F  S+ K+ N+GV+TG   +GE+R  C+ SN   +
Sbjct: 307 SPQIFRQQFAVSMAKLVNVGVLTGEDRVGEIRKVCSKSNSRAY 349


>sp|Q9LEH3|PER15_IPOBA Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1
           SV=1
          Length = 327

 Score = 38.1 bits (87), Expect = 0.014
 Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
 Frame = +1

Query: 37  NFTSPQ-AFFPAFVKSIIKMANIGVITGSSPLGEVRFKCNVSN 162
           NF++ Q AFF +FV+S+I M NI  +TGS+  GE+R  C   N
Sbjct: 287 NFSANQTAFFESFVQSMINMGNISPLTGSN--GEIRSNCRRPN 327


>sp|P37834|PER1_ORYSJ Peroxidase 1 OS=Oryza sativa subsp. japonica
           GN=PRX74 PE=2 SV=2
          Length = 326

 Score = 37.4 bits (85), Expect = 0.024
 Identities = 18/35 (51%), Positives = 23/35 (65%)
 Frame = +1

Query: 58  FFPAFVKSIIKMANIGVITGSSPLGEVRFKCNVSN 162
           FF  F  S++KM  + V+TGS   GE+R KCNV N
Sbjct: 294 FFADFAASMVKMGGVEVLTGSQ--GEIRKKCNVVN 326


>sp|Q9LDA4|PER38_ARATH Peroxidase 38 OS=Arabidopsis thaliana
           GN=PER38 PE=2 SV=1
          Length = 346

 Score = 37.0 bits (84), Expect = 0.031
 Identities = 17/35 (48%), Positives = 24/35 (68%)
 Frame = +1

Query: 58  FFPAFVKSIIKMANIGVITGSSPLGEVRFKCNVSN 162
           FF AFVK+II+M+++  +TG    GE+R  C V N
Sbjct: 295 FFDAFVKAIIRMSSLSPLTGKQ--GEIRLNCRVVN 327


>sp|P17180|PER3_ARMRU Peroxidase C3 OS=Armoracia rusticana GN=PRXC3
           PE=3 SV=1
          Length = 349

 Score = 35.8 bits (81), Expect = 0.068
 Identities = 17/39 (43%), Positives = 25/39 (64%)
 Frame = +1

Query: 55  AFFPAFVKSIIKMANIGVITGSSPLGEVRFKCNVSNGHV 171
           AFF AFV ++I+M N+  +TG+   GE+R  C V N  +
Sbjct: 300 AFFGAFVDAMIRMGNLRPLTGTQ--GEIRQNCRVVNSRI 336


>sp|P00433|PER1A_ARMRU Peroxidase C1A OS=Armoracia rusticana
           GN=PRXC1A PE=1 SV=2
          Length = 353

 Score = 35.8 bits (81), Expect = 0.068
 Identities = 20/48 (41%), Positives = 30/48 (62%)
 Frame = +1

Query: 25  RTCANFTSPQAFFPAFVKSIIKMANIGVITGSSPLGEVRFKCNVSNGH 168
           R+ AN T  Q FF AFV+++ +M NI  +TG+   G++R  C V N +
Sbjct: 294 RSFANST--QTFFNAFVEAMDRMGNITPLTGTQ--GQIRLNCRVVNSN 337


>sp|A5H453|PER42_MAIZE Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1
          Length = 321

 Score = 35.4 bits (80), Expect = 0.089
 Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
 Frame = +1

Query: 28  TCANFTSPQAFFP-AFVKSIIKMANIGVITGSSPLGEVRFKC 150
           T +NF S  A F  AF  +++KM N+G +TG+S  G++R  C
Sbjct: 276 TVSNFASSSAAFTSAFTAAMVKMGNLGPLTGTS--GQIRLTC 315


>sp|P15233|PER1C_ARMRU Peroxidase C1C (Fragment) OS=Armoracia
           rusticana GN=PRXC1C PE=3 SV=1
          Length = 332

 Score = 35.4 bits (80), Expect = 0.089
 Identities = 17/39 (43%), Positives = 25/39 (64%)
 Frame = +1

Query: 52  QAFFPAFVKSIIKMANIGVITGSSPLGEVRFKCNVSNGH 168
           Q FF AFV+++ +M NI  +TG+   GE+R  C V N +
Sbjct: 280 QTFFNAFVEAMNRMGNITPLTGTQ--GEIRLNCRVVNSN 316
tr_hit_id Q93XK6
Definition tr|Q93XK6|Q93XK6_MEDSA Peroxidase1A OS=Medicago sativa
Align length 37
Score (bit) 45.1
E-value 0.002
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920145|Adiantum capillus-veneris mRNA, clone:
YMU001_000133_E11.
         (274 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q93XK6|Q93XK6_MEDSA Peroxidase1A OS=Medicago sativa GN=prx1A ...    45   0.002
tr|O24081|O24081_MEDSA Peroxidase1A OS=Medicago sativa GN=prx1A ...    45   0.002
tr|Q5I3E9|Q5I3E9_TRIMO Peroxidase 9 (Fragment) OS=Triticum monoc...    45   0.002
tr|Q53YQ3|Q53YQ3_ARATH Peroxidase ATP29a OS=Arabidopsis thaliana...    44   0.005
tr|Q08IT3|Q08IT3_POPAL Peroxidase (Fragment) OS=Populus alba PE=...    44   0.005
tr|Q18PQ9|Q18PQ9_PEA Peroxidase OS=Pisum sativum PE=2 SV=1             43   0.007
tr|Q9XFL3|Q9XFL3_PHAVU Peroxidase 1 (Fragment) OS=Phaseolus vulg...    43   0.009
tr|Q0ZA88|Q0ZA88_HEVBR Rubber peroxidase 1 OS=Hevea brasiliensis...    43   0.009
tr|B5U1R2|B5U1R2_LITCN Peroxidase 2 OS=Litchi chinensis PE=2 SV=1      43   0.009
tr|Q8GZR9|Q8GZR9_LUPAL Peroxidase 1 (Fragment) OS=Lupinus albus ...    42   0.020
tr|Q40365|Q40365_MEDSA Peroxidase OS=Medicago sativa GN=pxdA PE=...    42   0.020
tr|Q18PR0|Q18PR0_PEA Peroxidase OS=Pisum sativum PE=2 SV=1             42   0.020
tr|O22443|O22443_SOYBN Seed coat peroxidase (Seed coat peroxidas...    42   0.020
tr|Q6JKN8|Q6JKN8_BRANA Peroxidase OS=Brassica napus GN=podC PE=2...    41   0.027
tr|Q43791|Q43791_MEDSA Peroxidase1C OS=Medicago sativa GN=prx1C ...    41   0.027
tr|Q43790|Q43790_MEDSA Peroxidase1B OS=Medicago sativa GN=prx1B ...    41   0.027
tr|A4UN78|A4UN78_MEDTR Peroxidase OS=Medicago truncatula GN=PRX3...    41   0.027
tr|A4UN77|A4UN77_MEDTR Peroxidase OS=Medicago truncatula GN=PRX2...    41   0.035
tr|Q42784|Q42784_SOYBN Seed coat peroxidase isozyme (Fragment) O...    40   0.045
tr|O23961|O23961_SOYBN Peroxidase OS=Glycine max GN=GMIPER1 PE=2...    40   0.045
tr|Q43102|Q43102_POPTR Peroxidase OS=Populus trichocarpa PE=2 SV=1     40   0.059
tr|A9PD65|A9PD65_POPTR Putative uncharacterized protein OS=Popul...    40   0.059
tr|Q8L4Z9|Q8L4Z9_ORYSJ Os07g0104400 protein OS=Oryza sativa subs...    40   0.077
tr|A7QE60|A7QE60_VITVI Chromosome chr4 scaffold_83, whole genome...    40   0.077
tr|A7PCE4|A7PCE4_VITVI Chromosome chr2 scaffold_11, whole genome...    40   0.077
tr|A7NWA2|A7NWA2_VITVI Chromosome chr5 scaffold_2, whole genome ...    40   0.077
tr|A5ARA9|A5ARA9_VITVI Putative uncharacterized protein OS=Vitis...    40   0.077
tr|A3BFS3|A3BFS3_ORYSJ Putative uncharacterized protein OS=Oryza...    40   0.077
tr|Q43101|Q43101_POPTR Peroxidase OS=Populus trichocarpa PE=2 SV=1     39   0.10 
tr|Q40366|Q40366_MEDSA Peroxidase OS=Medicago sativa GN=pxdC PE=...    39   0.10 

>tr|Q93XK6|Q93XK6_MEDSA Peroxidase1A OS=Medicago sativa GN=prx1A
           PE=3 SV=1
          Length = 350

 Score = 45.1 bits (105), Expect = 0.002
 Identities = 22/37 (59%), Positives = 27/37 (72%)
 Frame = +1

Query: 58  FFPAFVKSIIKMANIGVITGSSPLGEVRFKCNVSNGH 168
           FF  FV S+IKM NIGV+TGS   GE+R +CN  NG+
Sbjct: 298 FFENFVASMIKMGNIGVLTGSQ--GEIRTQCNAVNGN 332


>tr|O24081|O24081_MEDSA Peroxidase1A OS=Medicago sativa GN=prx1A
           PE=2 SV=1
          Length = 351

 Score = 45.1 bits (105), Expect = 0.002
 Identities = 22/37 (59%), Positives = 27/37 (72%)
 Frame = +1

Query: 58  FFPAFVKSIIKMANIGVITGSSPLGEVRFKCNVSNGH 168
           FF  FV S+IKM NIGV+TGS   GE+R +CN  NG+
Sbjct: 296 FFENFVASMIKMGNIGVLTGSQ--GEIRTQCNAVNGN 330


>tr|Q5I3E9|Q5I3E9_TRIMO Peroxidase 9 (Fragment) OS=Triticum
           monococcum GN=POX9 PE=2 SV=1
          Length = 204

 Score = 44.7 bits (104), Expect = 0.002
 Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
 Frame = +1

Query: 13  PRRHRTCANFTSPQ-AFFPAFVKSIIKMANIGVITGSSPLGEVRFKCNVSNGHV 171
           P   R    F+  Q AFF  F KS++KM+N+ ++TGS   GE+RF C V N  V
Sbjct: 138 PNTTRMATRFSLNQGAFFEQFAKSMVKMSNMDLLTGSQ--GEIRFNCAVPNSRV 189


>tr|Q53YQ3|Q53YQ3_ARATH Peroxidase ATP29a OS=Arabidopsis thaliana
           PE=4 SV=1
          Length = 358

 Score = 43.5 bits (101), Expect = 0.005
 Identities = 25/44 (56%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
 Frame = +1

Query: 37  NFTSPQA-FFPAFVKSIIKMANIGVITGSSPLGEVRFKCNVSNG 165
           +F S Q  FF AFV+S+IKM NI  +TGSS  GE+R  C V NG
Sbjct: 294 SFASNQTLFFEAFVQSMIKMGNISPLTGSS--GEIRQDCKVVNG 335


>tr|Q08IT3|Q08IT3_POPAL Peroxidase (Fragment) OS=Populus alba PE=2
           SV=1
          Length = 329

 Score = 43.5 bits (101), Expect = 0.005
 Identities = 25/44 (56%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
 Frame = +1

Query: 37  NFTSPQ-AFFPAFVKSIIKMANIGVITGSSPLGEVRFKCNVSNG 165
           NF+S Q AFF +FV+SII M NI  +TGSS  GE+R  C   NG
Sbjct: 287 NFSSNQTAFFQSFVQSIINMGNISPLTGSS--GEIRSDCKKVNG 328


>tr|Q18PQ9|Q18PQ9_PEA Peroxidase OS=Pisum sativum PE=2 SV=1
          Length = 356

 Score = 43.1 bits (100), Expect = 0.007
 Identities = 20/37 (54%), Positives = 27/37 (72%)
 Frame = +1

Query: 58  FFPAFVKSIIKMANIGVITGSSPLGEVRFKCNVSNGH 168
           FF  FV S+IKM N+GV+TG+   GE+R +CN  NG+
Sbjct: 300 FFENFVASMIKMGNLGVLTGTQ--GEIRTQCNALNGN 334


>tr|Q9XFL3|Q9XFL3_PHAVU Peroxidase 1 (Fragment) OS=Phaseolus
           vulgaris GN=FBP1 PE=2 SV=1
          Length = 341

 Score = 42.7 bits (99), Expect = 0.009
 Identities = 23/44 (52%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
 Frame = +1

Query: 40  FTSPQA-FFPAFVKSIIKMANIGVITGSSPLGEVRFKCNVSNGH 168
           F+S Q  FF +F  ++IKM NIGV+TGS   GE+R +CN  NG+
Sbjct: 279 FSSNQTLFFESFKAAMIKMGNIGVLTGSQ--GEIRKQCNFVNGN 320


>tr|Q0ZA88|Q0ZA88_HEVBR Rubber peroxidase 1 OS=Hevea brasiliensis
           GN=rbp1 PE=2 SV=1
          Length = 346

 Score = 42.7 bits (99), Expect = 0.009
 Identities = 20/45 (44%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
 Frame = +1

Query: 37  NFTSPQ-AFFPAFVKSIIKMANIGVITGSSPLGEVRFKCNVSNGH 168
           NF++ Q AFF +FV+S+++M N+ V+TG+  +GE+R  C+  NG+
Sbjct: 291 NFSANQTAFFESFVESMLRMGNLSVLTGT--IGEIRLNCSKVNGN 333


>tr|B5U1R2|B5U1R2_LITCN Peroxidase 2 OS=Litchi chinensis PE=2 SV=1
          Length = 353

 Score = 42.7 bits (99), Expect = 0.009
 Identities = 22/45 (48%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
 Frame = +1

Query: 34  ANFTSPQ-AFFPAFVKSIIKMANIGVITGSSPLGEVRFKCNVSNG 165
           +NF+S Q AFF +FV S+I+M N+  +TG+   GE+R  C+V NG
Sbjct: 294 SNFSSNQTAFFESFVVSMIRMGNLSPLTGTD--GEIRLNCSVVNG 336


>tr|Q8GZR9|Q8GZR9_LUPAL Peroxidase 1 (Fragment) OS=Lupinus albus
           GN=prx1 PE=2 SV=1
          Length = 292

 Score = 41.6 bits (96), Expect = 0.020
 Identities = 21/36 (58%), Positives = 26/36 (72%)
 Frame = +1

Query: 55  AFFPAFVKSIIKMANIGVITGSSPLGEVRFKCNVSN 162
           AFF +F  S+IKM NIGVITG +  GE+R +CN  N
Sbjct: 234 AFFASFKASMIKMGNIGVITGKN--GEIRKQCNFIN 267