BP920157 |
Clone id |
YMU001_000133_G01 |
Library |
YMU01 |
Length |
550 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000133_G01. |
Accession |
BP920157 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL541Contig1 |
Sequence |
TTGAATTTGATCTAGCTTCTCAGATCCAGGACTACACAAATTTGACCGAATATAAATTCG TACAAAACTAAGGGCAAAATTGTTCCATACTTGCTCACGAGCAGTATTCAAAGCTTCTTC CCCATGCTTATTTGAAACATTTGGCCTCTAAAAGCTTCTCACCATCAAACTCATCAGGCT CCTCGAGATAAGCATTGACCCTCTCCTTCTGAGCTTCATCTGCAGTGTCAACCTTGGTCC ATTCATAGAGTTCTACATCATAGCATTCGTCCAGAACCATCTGGGGAATCTCTTGCCCTC TGAAGAGCCACACCCCTTTGATCTTGAAGGGGCCAGTCTCCCCAAAAATGCACAATTTAG CAAACCCGTGCTTCCTGATGAAATCCATGCGTTGTAGAAAGCCACTAACTTTGTTCATGG TGACAAATGTTACCGTGTTTTCCTCATTATATTTGTAGTCACAGAACCATAGAGAATAAC CTTCAGGATCGTACATCTTCCAAAACCCTTCAATCGCAACTTCTCTAAAGTCTTATTCGC GGNCGCGAAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5Z627 |
Definition |
sp|Q5Z627|EF1G3_ORYSJ Elongation factor 1-gamma 3 OS=Oryza sativa subsp. japonica |
Align length |
134 |
Score (bit) |
223.0 |
E-value |
4.0e-58 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q0DBE3 |
Definition |
tr|Q0DBE3|Q0DBE3_ORYSJ Os06g0571400 protein OS=Oryza sativa subsp. japonica |
Align length |
134 |
Score (bit) |
223.0 |
E-value |
4.0e-57 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920157|Adiantum capillus-veneris mRNA, clone: YMU001_000133_G01. (550 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q0DBE3|Q0DBE3_ORYSJ Os06g0571400 protein OS=Oryza sativa subs... 223 4e-57 tr|A3BCY2|A3BCY2_ORYSJ Putative uncharacterized protein OS=Oryza... 223 4e-57 tr|A7QC85|A7QC85_VITVI Chromosome undetermined scaffold_77, whol... 223 5e-57 tr|A5AKT0|A5AKT0_VITVI Putative uncharacterized protein OS=Vitis... 221 2e-56 tr|A9PE52|A9PE52_POPTR Putative uncharacterized protein OS=Popul... 221 3e-56 tr|B6TGB2|B6TGB2_MAIZE Elongation factor 1-gamma 3 OS=Zea mays P... 220 3e-56 tr|B6T7G7|B6T7G7_MAIZE Elongation factor 1-gamma 3 OS=Zea mays P... 220 3e-56 tr|B4FCY0|B4FCY0_MAIZE Putative uncharacterized protein OS=Zea m... 219 6e-56 tr|A9NWP6|A9NWP6_PICSI Putative uncharacterized protein OS=Picea... 219 6e-56 tr|Q1SL16|Q1SL16_MEDTR Elongation factor 1, gamma chain; Glutath... 218 1e-55 tr|Q0E2Q7|Q0E2Q7_ORYSJ Os02g0220500 protein OS=Oryza sativa subs... 218 2e-55 tr|B8AE83|B8AE83_ORYSI Putative uncharacterized protein OS=Oryza... 218 2e-55 tr|A9RWY6|A9RWY6_PHYPA Predicted protein OS=Physcomitrella paten... 218 2e-55 tr|A3A4M8|A3A4M8_ORYSJ Putative uncharacterized protein OS=Oryza... 218 2e-55 tr|Q0E2Q6|Q0E2Q6_ORYSJ Os02g0220600 protein OS=Oryza sativa subs... 218 2e-55 tr|B8AE84|B8AE84_ORYSI Putative uncharacterized protein OS=Oryza... 218 2e-55 tr|B7SDI2|B7SDI2_ORYSJ Elongation factor 1-gamma OS=Oryza sativa... 218 2e-55 tr|Q56WV5|Q56WV5_ARATH Putative uncharacterized protein At1g0964... 215 1e-54 tr|B6TY76|B6TY76_MAIZE Elongation factor 1-gamma 2 OS=Zea mays P... 215 1e-54 tr|A9SXF9|A9SXF9_PHYPA Predicted protein OS=Physcomitrella paten... 215 1e-54 tr|B7FJM4|B7FJM4_MEDTR Putative uncharacterized protein OS=Medic... 215 1e-54 tr|A9T682|A9T682_PHYPA Predicted protein OS=Physcomitrella paten... 214 3e-54 tr|B8B3U4|B8B3U4_ORYSI Putative uncharacterized protein OS=Oryza... 213 7e-54 tr|B2LT58|B2LT58_TOBAC Elongation factor 1 gamma-like protein OS... 212 9e-54 tr|B7FK86|B7FK86_MEDTR Putative uncharacterized protein OS=Medic... 210 3e-53 tr|Q38M56|Q38M56_SOLTU Putative uncharacterized protein OS=Solan... 210 5e-53 tr|Q2VCK4|Q2VCK4_SOLTU Putative elongation factor 1-gamma-like O... 210 5e-53 tr|Q8S3W1|Q8S3W1_SOYBN Elongation factor 1-gamma OS=Glycine max ... 202 1e-50 tr|Q56ZZ4|Q56ZZ4_ARATH Putative uncharacterized protein At1g5772... 149 1e-34 tr|A6MZH4|A6MZH4_ORYSI Elongation factor 1-gamma 3 (Fragment) OS... 143 5e-33
>tr|Q0DBE3|Q0DBE3_ORYSJ Os06g0571400 protein OS=Oryza sativa subsp. japonica GN=Os06g0571400 PE=2 SV=1 Length = 416
Score = 223 bits (569), Expect = 4e-57 Identities = 97/134 (72%), Positives = 117/134 (87%) Frame = -1
Query: 532 DFREVAIEGFWKMYDPEGYSLWFCDYKYNEENTVTFVTMNKVSGFLQRMDFIRKHGFAKL 353 +FRE+AI+GFW MYDPEGYSLWFCDYKYN+ENTV+FVTMNKV GFLQRMD RK+ F K+ Sbjct: 283 NFREIAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTMNKVGGFLQRMDLCRKYAFGKM 342
Query: 352 CIFGETGPFKIKGVWLFRGQEIPQMVLDECYDVELYEWTKVDTADEAQKERVNAYLEEPD 173 + G T PFK+KG+WLFRGQ+IP+ V+DE YD+ELYEWTKVD +DEAQKERVNA +E+ + Sbjct: 343 LVIGSTPPFKVKGLWLFRGQDIPKFVMDEVYDMELYEWTKVDLSDEAQKERVNAMIEDQE 402
Query: 172 EFDGEKLLEAKCFK 131 F+GE LL+AKCFK Sbjct: 403 PFEGEDLLDAKCFK 416
>tr|A3BCY2|A3BCY2_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_020904 PE=4 SV=1 Length = 440
Score = 223 bits (569), Expect = 4e-57 Identities = 97/134 (72%), Positives = 117/134 (87%) Frame = -1
Query: 532 DFREVAIEGFWKMYDPEGYSLWFCDYKYNEENTVTFVTMNKVSGFLQRMDFIRKHGFAKL 353 +FRE+AI+GFW MYDPEGYSLWFCDYKYN+ENTV+FVTMNKV GFLQRMD RK+ F K+ Sbjct: 307 NFREIAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTMNKVGGFLQRMDLCRKYAFGKM 366
Query: 352 CIFGETGPFKIKGVWLFRGQEIPQMVLDECYDVELYEWTKVDTADEAQKERVNAYLEEPD 173 + G T PFK+KG+WLFRGQ+IP+ V+DE YD+ELYEWTKVD +DEAQKERVNA +E+ + Sbjct: 367 LVIGSTPPFKVKGLWLFRGQDIPKFVMDEVYDMELYEWTKVDLSDEAQKERVNAMIEDQE 426
Query: 172 EFDGEKLLEAKCFK 131 F+GE LL+AKCFK Sbjct: 427 PFEGEDLLDAKCFK 440
>tr|A7QC85|A7QC85_VITVI Chromosome undetermined scaffold_77, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00035293001 PE=4 SV=1 Length = 339
Score = 223 bits (568), Expect = 5e-57 Identities = 96/134 (71%), Positives = 115/134 (85%) Frame = -1
Query: 532 DFREVAIEGFWKMYDPEGYSLWFCDYKYNEENTVTFVTMNKVSGFLQRMDFIRKHGFAKL 353 +FREVAI+GFW MYDPEGYSLWFCDYKYN+ENTV+FVT+NKV GFLQRMD RK+ F K+ Sbjct: 206 NFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKM 265
Query: 352 CIFGETGPFKIKGVWLFRGQEIPQMVLDECYDVELYEWTKVDTADEAQKERVNAYLEEPD 173 + G PFK+KG+WLFRGQEIPQ ++DECYD+ELYEW KVD +DEAQKERVN +E+ + Sbjct: 266 LVIGSEAPFKVKGLWLFRGQEIPQFIIDECYDMELYEWKKVDISDEAQKERVNQMIEDQE 325
Query: 172 EFDGEKLLEAKCFK 131 F+GE LL+AKCFK Sbjct: 326 PFEGEALLDAKCFK 339
>tr|A5AKT0|A5AKT0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021574 PE=4 SV=1 Length = 423
Score = 221 bits (563), Expect = 2e-56 Identities = 95/134 (70%), Positives = 114/134 (85%) Frame = -1
Query: 532 DFREVAIEGFWKMYDPEGYSLWFCDYKYNEENTVTFVTMNKVSGFLQRMDFIRKHGFAKL 353 +F EVAI+GFW MYDPEGYSLWFCDYKYN+ENTV+FVT+NKV GFLQRMD RK+ F K+ Sbjct: 290 NFHEVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKM 349
Query: 352 CIFGETGPFKIKGVWLFRGQEIPQMVLDECYDVELYEWTKVDTADEAQKERVNAYLEEPD 173 + G PFK+KG+WLFRGQEIPQ ++DECYD+ELYEW KVD +DEAQKERVN +E+ + Sbjct: 350 LVIGSEAPFKVKGLWLFRGQEIPQFIIDECYDMELYEWKKVDISDEAQKERVNQMIEDQE 409
Query: 172 EFDGEKLLEAKCFK 131 F+GE LL+AKCFK Sbjct: 410 PFEGEALLDAKCFK 423
>tr|A9PE52|A9PE52_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 422
Score = 221 bits (562), Expect = 3e-56 Identities = 96/134 (71%), Positives = 116/134 (86%) Frame = -1
Query: 532 DFREVAIEGFWKMYDPEGYSLWFCDYKYNEENTVTFVTMNKVSGFLQRMDFIRKHGFAKL 353 +FREVAI+GFW+MYDPEGYSLWFC+YKYNEENTV+FVT+NKV GFLQRMD RK+ F K+ Sbjct: 289 NFREVAIKGFWEMYDPEGYSLWFCNYKYNEENTVSFVTLNKVGGFLQRMDLARKYAFGKM 348
Query: 352 CIFGETGPFKIKGVWLFRGQEIPQMVLDECYDVELYEWTKVDTADEAQKERVNAYLEEPD 173 + G PFK+KG+WLFRGQEIPQ V+DECYD+ELYEWTKVD +DEAQKER + +E+ + Sbjct: 349 LVIGSEPPFKVKGLWLFRGQEIPQFVIDECYDMELYEWTKVDISDEAQKERASQMIEDCE 408
Query: 172 EFDGEKLLEAKCFK 131 F+GE LL+AKCFK Sbjct: 409 PFEGEALLDAKCFK 422
>tr|B6TGB2|B6TGB2_MAIZE Elongation factor 1-gamma 3 OS=Zea mays PE=2 SV=1 Length = 417
Score = 220 bits (561), Expect = 3e-56 Identities = 95/134 (70%), Positives = 116/134 (86%) Frame = -1
Query: 532 DFREVAIEGFWKMYDPEGYSLWFCDYKYNEENTVTFVTMNKVSGFLQRMDFIRKHGFAKL 353 +FREVAI+GFW MYDPEGYSLWFCDYKYN+ENTV+FVT+NKV GFLQRMD RK+ F K+ Sbjct: 284 NFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLCRKYAFGKM 343
Query: 352 CIFGETGPFKIKGVWLFRGQEIPQMVLDECYDVELYEWTKVDTADEAQKERVNAYLEEPD 173 + G PFK+KG+WLFRGQ++P+ V+DE YD+ELYEWTKVD +DEAQKERVNA +E+ + Sbjct: 344 LVIGSEPPFKLKGLWLFRGQDVPKFVMDEVYDIELYEWTKVDISDEAQKERVNAMIEDQE 403
Query: 172 EFDGEKLLEAKCFK 131 F+GE LL+AKCFK Sbjct: 404 PFEGEALLDAKCFK 417
>tr|B6T7G7|B6T7G7_MAIZE Elongation factor 1-gamma 3 OS=Zea mays PE=2 SV=1 Length = 417
Score = 220 bits (561), Expect = 3e-56 Identities = 96/134 (71%), Positives = 116/134 (86%) Frame = -1
Query: 532 DFREVAIEGFWKMYDPEGYSLWFCDYKYNEENTVTFVTMNKVSGFLQRMDFIRKHGFAKL 353 +FREVAI+GFW MYDPEGYSLWFCDYKYN+ENTV+FVT+NKV GFLQRMD RK+ F K+ Sbjct: 284 NFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLCRKYAFGKM 343
Query: 352 CIFGETGPFKIKGVWLFRGQEIPQMVLDECYDVELYEWTKVDTADEAQKERVNAYLEEPD 173 + G PFK+KG+WLFRGQE+P+ V+DE YD+ELYEWTKVD +DEAQKERVNA +E+ + Sbjct: 344 LVVGSEPPFKLKGLWLFRGQEVPKFVMDEVYDMELYEWTKVDISDEAQKERVNAMIEDQE 403
Query: 172 EFDGEKLLEAKCFK 131 F+GE LL+AKCFK Sbjct: 404 PFEGEALLDAKCFK 417
>tr|B4FCY0|B4FCY0_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 307
Score = 219 bits (559), Expect = 6e-56 Identities = 95/134 (70%), Positives = 116/134 (86%) Frame = -1
Query: 532 DFREVAIEGFWKMYDPEGYSLWFCDYKYNEENTVTFVTMNKVSGFLQRMDFIRKHGFAKL 353 +FREVAI+GFW MYDPEGYSLWFCDYKYN+ENTV+FVT+NKV GFLQRMD RK+ F K+ Sbjct: 174 NFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLCRKYAFGKM 233
Query: 352 CIFGETGPFKIKGVWLFRGQEIPQMVLDECYDVELYEWTKVDTADEAQKERVNAYLEEPD 173 + G PFK+KG+WLFRGQ++P+ V+DE YD+ELYEWTKVD +DEAQKERVNA +E+ + Sbjct: 234 LVIGSEPPFKLKGLWLFRGQDVPKFVMDEVYDMELYEWTKVDISDEAQKERVNAMIEDQE 293
Query: 172 EFDGEKLLEAKCFK 131 F+GE LL+AKCFK Sbjct: 294 PFEGEALLDAKCFK 307
>tr|A9NWP6|A9NWP6_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 424
Score = 219 bits (559), Expect = 6e-56 Identities = 96/134 (71%), Positives = 116/134 (86%) Frame = -1
Query: 532 DFREVAIEGFWKMYDPEGYSLWFCDYKYNEENTVTFVTMNKVSGFLQRMDFIRKHGFAKL 353 +FREVAI+GFW MYDPEGYSLWFC+YKYN+ENTV+FVT+NKV+GFLQRMD RK+ F K+ Sbjct: 291 NFREVAIKGFWDMYDPEGYSLWFCEYKYNDENTVSFVTLNKVTGFLQRMDLARKYAFGKM 350
Query: 352 CIFGETGPFKIKGVWLFRGQEIPQMVLDECYDVELYEWTKVDTADEAQKERVNAYLEEPD 173 I G+ GPFK+KG+WLFRG EIP+ +DECYD+ELYEWTKVD DEAQKE VNA +E+ + Sbjct: 351 LIIGKEGPFKVKGLWLFRGPEIPKFFVDECYDMELYEWTKVDLNDEAQKELVNAMIEDQE 410
Query: 172 EFDGEKLLEAKCFK 131 F+GE LL+AKCFK Sbjct: 411 PFEGEPLLDAKCFK 424
>tr|Q1SL16|Q1SL16_MEDTR Elongation factor 1, gamma chain; Glutathione S-transferase, C-terminal; Thioredoxin-like fold OS=Medicago truncatula GN=MtrDRAFT_AC140549g9v2 PE=4 SV=1 Length = 418
Score = 218 bits (556), Expect = 1e-55 Identities = 94/134 (70%), Positives = 114/134 (85%) Frame = -1
Query: 532 DFREVAIEGFWKMYDPEGYSLWFCDYKYNEENTVTFVTMNKVSGFLQRMDFIRKHGFAKL 353 +FREVAI+GFW MYDPEGYSLWFCDYKYN+ENTV+FVT+NKV GFLQRMD RK+ F K+ Sbjct: 285 NFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKM 344
Query: 352 CIFGETGPFKIKGVWLFRGQEIPQMVLDECYDVELYEWTKVDTADEAQKERVNAYLEEPD 173 I G PFK+KG+WLFRGQEIP+ ++DECYD+ELYEWTKVD +DE QKER + +E+ + Sbjct: 345 LIIGSEPPFKVKGLWLFRGQEIPKFIIDECYDMELYEWTKVDISDEVQKERASQMIEDAE 404
Query: 172 EFDGEKLLEAKCFK 131 F+GE LL+AKCFK Sbjct: 405 PFEGEALLDAKCFK 418
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