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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920166
Clone id YMU001_000133_G12
Library
Length 149
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000133_G12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AAATGTCTCCGAAGCCTAACTCACCCTCTACAGAACATGCAGACTACCCAATGCTAAGTC
CTCCCCCTTCATCAACAGTTAAACCCAATGAGGGCGATGAAGCCAAAGACAGAGCTTCAA
CCACAAGGAGCAGCCAGTTTTGAGCAGTT
■■Homology search results ■■ -
sp_hit_id Q4IAK7
Definition sp|Q4IAK7|SWR1_GIBZE Helicase SWR1 OS=Gibberella zeae
Align length 51
Score (bit) 32.0
E-value 1.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920166|Adiantum capillus-veneris mRNA, clone:
YMU001_000133_G12.
         (149 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q4IAK7|SWR1_GIBZE Helicase SWR1 OS=Gibberella zeae GN=SWR1 PE...    32   1.0  
sp|Q08DG7|HXA3_BOVIN Homeobox protein Hox-A3 OS=Bos taurus GN=HO...    31   2.2  
sp|Q0UG82|INO80_PHANO Putative DNA helicase INO80 OS=Phaeosphaer...    30   2.9  
sp|Q8CHP6|PHC3_MOUSE Polyhomeotic-like protein 3 OS=Mus musculus...    30   5.0  
sp|P58871|TB182_MOUSE 182 kDa tankyrase 1-binding protein OS=Mus...    29   6.5  
sp|A1WVI0|PUR7_HALHL Phosphoribosylaminoimidazole-succinocarboxa...    29   6.5  
sp|Q05544|NO551_SOYBN Early nodulin-55-1 (Fragment) OS=Glycine m...    29   6.5  
sp|P21138|SERA_ENTHI Serine-rich 25 kDa antigen protein OS=Entam...    29   8.5  
sp|Q02362|ICP4_GAHVG Trans-acting transcriptional activator prot...    29   8.5  
sp|Q6PGY5|DJC21_DANRE DnaJ homolog subfamily C member 21 OS=Dani...    29   8.5  

>sp|Q4IAK7|SWR1_GIBZE Helicase SWR1 OS=Gibberella zeae GN=SWR1 PE=3
           SV=1
          Length = 1691

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 11/51 (21%)
 Frame = +3

Query: 12  KPNSPSTEHADYP-----MLSPPPSSTVKPNEGDEAK------DRASTTRS 131
           KP+SP+TE A  P       SPP +S  KP+E D A       D+  T+RS
Sbjct: 741 KPHSPATEPATNPPSRVHSTSPPATSETKPSELDTASTEEMAVDKHDTSRS 791


>sp|Q08DG7|HXA3_BOVIN Homeobox protein Hox-A3 OS=Bos taurus GN=HOXA3
           PE=2 SV=1
          Length = 442

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 15/41 (36%), Positives = 18/41 (43%)
 Frame = +3

Query: 9   PKPNSPSTEHADYPMLSPPPSSTVKPNEGDEAKDRASTTRS 131
           P+P +P    A  P   PPPSS   P  G      AS  +S
Sbjct: 103 PQPPAPPQPPAPTPAAPPPPSSVSPPQNGSSNPTPASAAKS 143


>sp|Q0UG82|INO80_PHANO Putative DNA helicase INO80 OS=Phaeosphaeria
           nodorum GN=INO80 PE=3 SV=2
          Length = 1673

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +3

Query: 3   MSPKPNSPSTEHADYPMLSPPPSSTV-KPNEGDEAKD 110
           MS  P SPS  HA+   + PPP++   +P+  DEA++
Sbjct: 156 MSHSPVSPSVYHANRGAVQPPPANYARRPSMKDEARE 192


>sp|Q8CHP6|PHC3_MOUSE Polyhomeotic-like protein 3 OS=Mus musculus
           GN=Phc3 PE=1 SV=1
          Length = 981

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 3   MSPKPNSPSTEHADYPMLSPPPSSTVKPNEGDEAK 107
           +SP P++   +H   P+ S PP  TV PN+   A+
Sbjct: 357 LSPAPSNAQPQHCS-PVQSHPPPLTVSPNQAQSAQ 390


>sp|P58871|TB182_MOUSE 182 kDa tankyrase 1-binding protein OS=Mus
           musculus GN=Tnks1bp1 PE=1 SV=2
          Length = 1720

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = +3

Query: 3   MSPKPNSP--STEHADYPMLSPPPSS-TVKPNEGDEAKDRASTTRSSQ 137
           +SP+P  P  S+   D  + SPPP+S + +   G E KDR S +  S+
Sbjct: 672 VSPEPTGPESSSRWLDDLLASPPPNSGSARRAAGAELKDRQSPSTCSE 719


>sp|A1WVI0|PUR7_HALHL
           Phosphoribosylaminoimidazole-succinocarboxamide synthase
           OS=Halorhodospira halophila (strain DSM 244 / SL1)
           GN=purC PE=3 SV=1
          Length = 295

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 51  MLSPPPSSTVKPNEGDEAKDRASTTRSSQ 137
           +L  PP S V P E D+ +DR    R  Q
Sbjct: 79  LLDTPPESVVAPEEADQVRDRGVVVRRLQ 107


>sp|Q05544|NO551_SOYBN Early nodulin-55-1 (Fragment) OS=Glycine max
           GN=ENOD55-1 PE=2 SV=1
          Length = 137

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +3

Query: 6   SPKPNSPSTEHADYPMLSPPPSSTVKPNEGDEAKDRASTTRSS 134
           SP P+SPS   +  P  SP PS ++         +    TRSS
Sbjct: 77  SPSPSSPSPSPSPSPSPSPSPSPSLSSPSPSPLPNNQGVTRSS 119


>sp|P21138|SERA_ENTHI Serine-rich 25 kDa antigen protein
           OS=Entamoeba histolytica PE=1 SV=1
          Length = 233

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
 Frame = +3

Query: 6   SPKP-NSPSTEHADYPMLSPPPSSTVKPNEGDEAKDRASTTRSSQ 137
           S KP N P    +D P   P  SST KP      K  AS+T   +
Sbjct: 140 SDKPDNKPEASSSDKPDNKPEASSTNKPEASSTNKPEASSTNKPE 184


>sp|Q02362|ICP4_GAHVG Trans-acting transcriptional activator protein
           ICP4 OS=Gallid herpesvirus 2 (strain GA) GN=ICP4 PE=3
           SV=1
          Length = 1415

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
 Frame = +3

Query: 6   SPKPNSPSTEHA-DYPMLSPP---PSSTVKPNEGDEAKDRASTTRSS 134
           SP+P  P T  + ++ ++SPP   PS+T   N G  ++  +S++ SS
Sbjct: 119 SPRPRGPETSPSNEHIIISPPRNPPSNTTHRNVGHVSRSPSSSSSSS 165


>sp|Q6PGY5|DJC21_DANRE DnaJ homolog subfamily C member 21 OS=Danio
           rerio GN=dnajc21 PE=2 SV=1
          Length = 545

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 17/43 (39%), Positives = 26/43 (60%)
 Frame = +3

Query: 3   MSPKPNSPSTEHADYPMLSPPPSSTVKPNEGDEAKDRASTTRS 131
           +SP P+S +TE  D P+ S  P   VKP +G E  ++ ST ++
Sbjct: 430 LSPAPDSGNTE--DTPVPSEDPDDGVKP-DGQENTNQKSTAKT 469
tr_hit_id B4P493
Definition tr|B4P493|B4P493_DROYA GE13886 OS=Drosophila yakuba
Align length 43
Score (bit) 37.4
E-value 0.38
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920166|Adiantum capillus-veneris mRNA, clone:
YMU001_000133_G12.
         (149 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4P493|B4P493_DROYA GE13886 OS=Drosophila yakuba GN=GE13886 P...    37   0.38 
tr|A4FP81|A4FP81_SACEN Putative serine/threonine protein kinase ...    35   1.9  
tr|Q74LP0|Q74LP0_LACJO Putative uncharacterized protein OS=Lacto...    33   7.2  
tr|B8PG42|B8PG42_9APHY Predicted protein OS=Postia placenta Mad-...    33   9.4  

>tr|B4P493|B4P493_DROYA GE13886 OS=Drosophila yakuba GN=GE13886 PE=4
           SV=1
          Length = 243

 Score = 37.4 bits (85), Expect = 0.38
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = +3

Query: 9   PKPNSPSTEHADYPMLSPPPSSTVKPNEGDEAKDRASTTRSSQ 137
           P+PNS      +  + S PPS T +P+  D+A+D  ST+ SSQ
Sbjct: 47  PEPNSQPEPEYESEIPSEPPSHTQQPSTDDDAEDSCSTSGSSQ 89


>tr|A4FP81|A4FP81_SACEN Putative serine/threonine protein kinase
           OS=Saccharopolyspora erythraea (strain NRRL 23338)
           GN=SACE_6690 PE=4 SV=1
          Length = 481

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = +3

Query: 15  PNSPSTEHADYPMLSPPPSSTVKPNEGDEA-KDRASTTRSSQ 137
           P  P+T+ ++ P  +PPP  T +P E + + +D  +TTR +Q
Sbjct: 387 PTVPATQQSNQPSAAPPPPPTSEPEETESSEEDEPTTTRQTQ 428


>tr|Q74LP0|Q74LP0_LACJO Putative uncharacterized protein
           OS=Lactobacillus johnsonii GN=LJ_0143 PE=4 SV=1
          Length = 982

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = +3

Query: 18  NSPSTEHADYPMLSPPPSSTVKPNEGDEAKDRASTTRSSQ 137
           N P T H   P       STVKP +  ++   ASTT SS+
Sbjct: 807 NKPDTSHVVKPSDKTDEDSTVKPTDKPDSHSEASTTNSSE 846


>tr|B8PG42|B8PG42_9APHY Predicted protein OS=Postia placenta
           Mad-698-R GN=POSPLDRAFT_97787 PE=4 SV=1
          Length = 498

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = +3

Query: 6   SPKP-NSPSTEHADYPMLSPPPSSTVKPNEGDEAKDRASTTRSSQ 137
           +P P ++ S +++D P +SP P+S+ +P  G    D  S T S Q
Sbjct: 188 APAPYDTYSDDYSDDPSVSPSPASSTRPQHGRTPSDALSRTSSEQ 232