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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920168
Clone id YMU001_000133_H02
Library
Length 390
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000133_H02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AAAACTTCAAGCTATAGGTGTATATCTTCTTTGCTGATGTTTGCTTGTGATGTTTTGAAA
AAATCTTCTTATGTAAGTTGTACACCCTCCGAGGAGGAATGGGGACGTTACAAAAGCCCC
CATCAAATACGATAGTATCAACCAGATTTCTGAAGGTCAGGAAGATAGAGCATGCCTTCA
TCATCACTATCTGGCTCAGCATCCCCATTTGCCTTATCATGGAATATGCAGTCAAATCCT
CATACCGAAAAGTCGTCCATGCCGCTGAAGTCAAAGTCATCGAACTTTGATCCTTCTACG
TCTTCCTCGTCCTCATCCACCTACTTATTCCAATCTACTTTCAAAAACAATGGTGGCTTC
CCCTCTGCTTTCAGCAATCTCTTCCACCAG
■■Homology search results ■■ -
sp_hit_id Q6ID70
Definition sp|Q6ID70|Y3377_ARATH Uncharacterized protein At3g03773 OS=Arabidopsis thaliana
Align length 82
Score (bit) 48.9
E-value 8.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920168|Adiantum capillus-veneris mRNA, clone:
YMU001_000133_H02.
         (390 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6ID70|Y3377_ARATH Uncharacterized protein At3g03773 OS=Arabi...    49   8e-06
sp|Q6YYB0|Y8359_ORYSJ Uncharacterized protein Os08g0359500 OS=Or...    36   0.069
sp|P0C8E4|M3K7_RAT Mitogen-activated protein kinase kinase kinas...    31   1.7  
sp|Q5RFL3|M3K7_PONAB Mitogen-activated protein kinase kinase kin...    31   1.7  
sp|Q62073|M3K7_MOUSE Mitogen-activated protein kinase kinase kin...    31   1.7  
sp|O43318|M3K7_HUMAN Mitogen-activated protein kinase kinase kin...    31   1.7  
sp|A2VDU3|M3K7_BOVIN Mitogen-activated protein kinase kinase kin...    31   1.7  
sp|P83260|SRB8_CAEEL Serpentine receptor class beta-8/9 OS=Caeno...    30   2.9  
sp|P22215|SLY41_YEAST Uncharacterized transporter SLY41 OS=Sacch...    30   3.8  
sp|Q05337|GNAF_DROME Guanine nucleotide-binding protein G(f) sub...    30   3.8  
sp|P13485|TAGF_BACSU CDP-glycerol:poly(glycerophosphate) glycero...    29   6.4  
sp|Q9JKB0|HCN1_RAT Potassium/sodium hyperpolarization-activated ...    29   6.4  
sp|Q9MZS1|HCN1_RABIT Potassium/sodium hyperpolarization-activate...    29   6.4  
sp|O88704|HCN1_MOUSE Potassium/sodium hyperpolarization-activate...    29   6.4  
sp|O60741|HCN1_HUMAN Potassium/sodium hyperpolarization-activate...    29   6.4  
sp|O06079|MMPLB_MYCLE Putative membrane protein mmpL11 OS=Mycoba...    29   8.4  

>sp|Q6ID70|Y3377_ARATH Uncharacterized protein At3g03773
           OS=Arabidopsis thaliana GN=At3g03773 PE=1 SV=1
          Length = 150

 Score = 48.9 bits (115), Expect = 8e-06
 Identities = 29/82 (35%), Positives = 37/82 (45%)
 Frame = -2

Query: 389 WWKRLLKAEGKPPLFLKVDWNKXXXXXXXXXEXXXXXXXXXXXXXXXXXXXXDCIFHDKA 210
           WW RLLK+E KP  ++KVDWNK                                      
Sbjct: 84  WWTRLLKSEEKPAPYIKVDWNKWCDEDEEVNSETASDDESAF-----------------V 126

Query: 209 NGDAEPDSDDEGMLYLPDLQKS 144
           N D+E  SDD+G+LYLPDL+K+
Sbjct: 127 NQDSE-SSDDDGLLYLPDLEKA 147


>sp|Q6YYB0|Y8359_ORYSJ Uncharacterized protein Os08g0359500 OS=Oryza
           sativa subsp. japonica GN=Os08g0359500 PE=2 SV=1
          Length = 213

 Score = 35.8 bits (81), Expect = 0.069
 Identities = 12/22 (54%), Positives = 18/22 (81%)
 Frame = -2

Query: 389 WWKRLLKAEGKPPLFLKVDWNK 324
           WWK+L++ + K P F+KVDW+K
Sbjct: 86  WWKKLVRDDQKAPHFVKVDWDK 107


>sp|P0C8E4|M3K7_RAT Mitogen-activated protein kinase kinase kinase 7
           OS=Rattus norvegicus GN=Map3k7 PE=2 SV=1
          Length = 606

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
 Frame = +3

Query: 153 KVRKIEHAFIITIWLSI--PICLIMEYAVKSSYRKVVHAAE 269
           ++ ++ H  I+ ++ +   P+CL+MEYA   S   V+H AE
Sbjct: 80  QLSRVNHPNIVKLYGACLNPVCLVMEYAEGGSLYNVLHGAE 120


>sp|Q5RFL3|M3K7_PONAB Mitogen-activated protein kinase kinase kinase
           7 OS=Pongo abelii GN=MAP3K7 PE=2 SV=1
          Length = 606

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
 Frame = +3

Query: 153 KVRKIEHAFIITIWLSI--PICLIMEYAVKSSYRKVVHAAE 269
           ++ ++ H  I+ ++ +   P+CL+MEYA   S   V+H AE
Sbjct: 80  QLSRVNHPNIVKLYGACLNPVCLVMEYAEGGSLYNVLHGAE 120


>sp|Q62073|M3K7_MOUSE Mitogen-activated protein kinase kinase kinase
           7 OS=Mus musculus GN=Map3k7 PE=1 SV=1
          Length = 579

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
 Frame = +3

Query: 153 KVRKIEHAFIITIWLSI--PICLIMEYAVKSSYRKVVHAAE 269
           ++ ++ H  I+ ++ +   P+CL+MEYA   S   V+H AE
Sbjct: 80  QLSRVNHPNIVKLYGACLNPVCLVMEYAEGGSLYNVLHGAE 120


>sp|O43318|M3K7_HUMAN Mitogen-activated protein kinase kinase kinase
           7 OS=Homo sapiens GN=MAP3K7 PE=1 SV=1
          Length = 606

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
 Frame = +3

Query: 153 KVRKIEHAFIITIWLSI--PICLIMEYAVKSSYRKVVHAAE 269
           ++ ++ H  I+ ++ +   P+CL+MEYA   S   V+H AE
Sbjct: 80  QLSRVNHPNIVKLYGACLNPVCLVMEYAEGGSLYNVLHGAE 120


>sp|A2VDU3|M3K7_BOVIN Mitogen-activated protein kinase kinase kinase
           7 OS=Bos taurus GN=MAP3K7 PE=2 SV=1
          Length = 579

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
 Frame = +3

Query: 153 KVRKIEHAFIITIWLSI--PICLIMEYAVKSSYRKVVHAAE 269
           ++ ++ H  I+ ++ +   P+CL+MEYA   S   V+H AE
Sbjct: 80  QLSRVNHPNIVKLYGACLNPVCLVMEYAEGGSLYNVLHGAE 120


>sp|P83260|SRB8_CAEEL Serpentine receptor class beta-8/9
           OS=Caenorhabditis elegans GN=srb-8 PE=2 SV=2
          Length = 351

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 15/68 (22%), Positives = 34/68 (50%)
 Frame = +3

Query: 108 LQKPPSNTIVSTRFLKVRKIEHAFIITIWLSIPICLIMEYAVKSSYRKVVHAAEVKVIEL 287
           + + P + I++ R+LK      +FI+T+   +PIC+ +E        +      VK+  +
Sbjct: 97  ISRTPCDLIINGRYLKYGHPTGSFIMTLSTLLPICITIERFFAMKNAETYEKTPVKLGPI 156

Query: 288 *SFYVFLV 311
            +F + ++
Sbjct: 157 ITFLLIII 164


>sp|P22215|SLY41_YEAST Uncharacterized transporter SLY41
           OS=Saccharomyces cerevisiae GN=SLY41 PE=1 SV=2
          Length = 453

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = -3

Query: 184 MMKACSIFLTFRNLVDTIVFDGGFCNVPIPPRRVYNLHKKIFSKHHKQTSAKKIYTYSL 8
           M++  S  +  RN V   +FD     +P PPR  +   KK +S   K+T + +++ Y +
Sbjct: 1   MIQTQSTAIKRRNSVHKNLFDPSLYQIPEPPRGGFQHQKKEYS---KETFSNQVFGYDI 56


>sp|Q05337|GNAF_DROME Guanine nucleotide-binding protein G(f)
           subunit alpha OS=Drosophila melanogaster GN=Galpha73B
           PE=2 SV=1
          Length = 399

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 104 DVTKAPIKYDSINQISEGQEDRACLHHHYLA 196
           D+T+ P K  S NQ+  G  +R C +H  +A
Sbjct: 341 DITQEPFKRHSRNQVDLGTSERECYYHFTVA 371
tr_hit_id B8LMY4
Definition tr|B8LMY4|B8LMY4_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 84
Score (bit) 57.4
E-value 4.0e-07
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920168|Adiantum capillus-veneris mRNA, clone:
YMU001_000133_H02.
         (390 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8LMY4|B8LMY4_PICSI Putative uncharacterized protein OS=Picea...    57   4e-07
tr|Q6AT62|Q6AT62_ORYSJ Putative ripening regulated protein (Expr...    53   9e-06
tr|Q0DPX1|Q0DPX1_ORYSJ Os03g0655300 protein OS=Oryza sativa subs...    53   9e-06
tr|A3AKZ9|A3AKZ9_ORYSJ Putative uncharacterized protein OS=Oryza...    52   1e-05
tr|B6T9V0|B6T9V0_MAIZE Prostaglandin E synthase 3 OS=Zea mays PE...    50   7e-05
tr|A7QRN1|A7QRN1_VITVI Chromosome undetermined scaffold_151, who...    48   3e-04
tr|Q75M67|Q75M67_ORYSJ Os03g0381300 protein OS=Oryza sativa subs...    47   4e-04
tr|Q3I0N3|Q3I0N3_DACGL P23 OS=Dactylis glomerata PE=2 SV=1             47   4e-04
tr|Q10KJ6|Q10KJ6_ORYSJ Expressed protein OS=Oryza sativa subsp. ...    47   4e-04
tr|B4FLE3|B4FLE3_MAIZE Prostaglandin E synthase 3 OS=Zea mays PE...    47   4e-04
tr|A3AIJ6|A3AIJ6_ORYSJ Putative uncharacterized protein OS=Oryza...    47   4e-04
tr|A2XHE4|A2XHE4_ORYSI Putative uncharacterized protein OS=Oryza...    47   4e-04
tr|A9P1E0|A9P1E0_PICSI Putative uncharacterized protein OS=Picea...    47   5e-04
tr|A9SRF6|A9SRF6_PHYPA Predicted protein (Fragment) OS=Physcomit...    46   8e-04
tr|A7QAJ9|A7QAJ9_VITVI Chromosome undetermined scaffold_71, whol...    46   8e-04
tr|A5AKK7|A5AKK7_VITVI Putative uncharacterized protein OS=Vitis...    46   8e-04
tr|Q1XG56|Q1XG56_CRYJA Putative p23 co-chaperone OS=Cryptomeria ...    45   0.001
tr|A9RC27|A9RC27_PHYPA Predicted protein (Fragment) OS=Physcomit...    43   0.009
tr|Q9FR62|Q9FR62_BRANA P23 OS=Brassica napus GN=p23 PE=2 SV=1          42   0.012
tr|Q9FR34|Q9FR34_SOLLC Ripening regulated protein DDTFR8 OS=Sola...    40   0.045
tr|B8ANK0|B8ANK0_ORYSI Putative uncharacterized protein OS=Oryza...    39   0.13 
tr|B7FF72|B7FF72_MEDTR Putative uncharacterized protein (Fragmen...    38   0.22 
tr|A7Q0B0|A7Q0B0_VITVI Chromosome chr7 scaffold_42, whole genome...    38   0.29 
tr|A9SAJ7|A9SAJ7_PHYPA Predicted protein OS=Physcomitrella paten...    37   0.64 
tr|B8BA14|B8BA14_ORYSI Putative uncharacterized protein OS=Oryza...    36   1.1  
tr|Q0HWW4|Q0HWW4_SHESR Polysaccharide biosynthesis protein OS=Sh...    35   1.4  
tr|B6TSH1|B6TSH1_MAIZE Co-chaperone protein SBA1 OS=Zea mays PE=...    35   2.4  
tr|B6TC23|B6TC23_MAIZE Co-chaperone protein SBA1 OS=Zea mays PE=...    35   2.4  
tr|B6T9A1|B6T9A1_MAIZE Co-chaperone protein SBA1 OS=Zea mays PE=...    35   2.4  
tr|B4G1A6|B4G1A6_MAIZE Putative uncharacterized protein OS=Zea m...    35   2.4  

>tr|B8LMY4|B8LMY4_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 157

 Score = 57.4 bits (137), Expect = 4e-07
 Identities = 33/84 (39%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
 Frame = -2

Query: 389 WWKRLLKAEGKPPLFLKVDWNKXXXXXXXXXEXXXXXXXXXXXXXXXXXXXXDCIFHDKA 210
           WWKRLLK+EGKP  ++KVDWNK                                  +D +
Sbjct: 85  WWKRLLKSEGKPAPYIKVDWNKWCDEDEEESSKLDAFNLED--------------INDIS 130

Query: 209 NGDAEPD--SDDEGMLYLPDLQKS 144
             +A  D  SDDEGMLYLPDL+K+
Sbjct: 131 KSEATDDDASDDEGMLYLPDLEKA 154


>tr|Q6AT62|Q6AT62_ORYSJ Putative ripening regulated protein
           (Expressed protein) OS=Oryza sativa subsp. japonica
           GN=OSJNBb0023J24.6 PE=4 SV=1
          Length = 152

 Score = 52.8 bits (125), Expect = 9e-06
 Identities = 31/81 (38%), Positives = 37/81 (45%)
 Frame = -2

Query: 389 WWKRLLKAEGKPPLFLKVDWNKXXXXXXXXXEXXXXXXXXXXXXXXXXXXXXDCIFHDKA 210
           WWKRLLK+E K P ++KVDWNK                                   D+ 
Sbjct: 86  WWKRLLKSEEKHP-YIKVDWNKWCDEDEESDAPVDSDDA-----------------FDEG 127

Query: 209 NGDAEPDSDDEGMLYLPDLQK 147
           N   E D DD+GMLYLPDL+K
Sbjct: 128 NDRDETDDDDDGMLYLPDLEK 148


>tr|Q0DPX1|Q0DPX1_ORYSJ Os03g0655300 protein OS=Oryza sativa subsp.
           japonica GN=Os03g0655300 PE=4 SV=1
          Length = 154

 Score = 52.8 bits (125), Expect = 9e-06
 Identities = 31/81 (38%), Positives = 37/81 (45%)
 Frame = -2

Query: 389 WWKRLLKAEGKPPLFLKVDWNKXXXXXXXXXEXXXXXXXXXXXXXXXXXXXXDCIFHDKA 210
           WWKRLLK+E K P ++KVDWNK                                   D+ 
Sbjct: 88  WWKRLLKSEEKHP-YIKVDWNKWCDEDEESDAPVDSDDA-----------------FDEG 129

Query: 209 NGDAEPDSDDEGMLYLPDLQK 147
           N   E D DD+GMLYLPDL+K
Sbjct: 130 NDRDETDDDDDGMLYLPDLEK 150


>tr|A3AKZ9|A3AKZ9_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_011471 PE=4 SV=1
          Length = 170

 Score = 52.0 bits (123), Expect = 1e-05
 Identities = 32/84 (38%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
 Frame = -2

Query: 389 WWKRLLKAEGKPPLFLKVDWNKXXXXXXXXXEXXXXXXXXXXXXXXXXXXXXDCIFHDK- 213
           WWKRLLK+E K P ++KVDWNK                                + +DK 
Sbjct: 88  WWKRLLKSEEKHP-YIKVDWNKWCDEDEESGPPIVHEGQVHNIFNFTGCD----VLYDKH 142

Query: 212 --ANGDAEPDSDDEGMLYLPDLQK 147
              N   E D DD+GMLYLPDL+K
Sbjct: 143 FFGNDRDETDDDDDGMLYLPDLEK 166


>tr|B6T9V0|B6T9V0_MAIZE Prostaglandin E synthase 3 OS=Zea mays PE=2
           SV=1
          Length = 165

 Score = 49.7 bits (117), Expect = 7e-05
 Identities = 32/81 (39%), Positives = 38/81 (46%)
 Frame = -2

Query: 389 WWKRLLKAEGKPPLFLKVDWNKXXXXXXXXXEXXXXXXXXXXXXXXXXXXXXDCIFHDKA 210
           WWKRLLK+E K P ++KVDWNK                                   D+A
Sbjct: 100 WWKRLLKSEEKHP-YIKVDWNKWCDEDEESEFSGDSDGG-----------------FDEA 141

Query: 209 NGDAEPDSDDEGMLYLPDLQK 147
           N   E D DD+GMLYLPDL+K
Sbjct: 142 NEGDESD-DDDGMLYLPDLEK 161


>tr|A7QRN1|A7QRN1_VITVI Chromosome undetermined scaffold_151, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00005425001 PE=4 SV=1
          Length = 164

 Score = 47.8 bits (112), Expect = 3e-04
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = -2

Query: 389 WWKRLLKAEGKPPLFLKVDWNK 324
           WW RLLK EGKPP+FLKVDW+K
Sbjct: 120 WWSRLLKQEGKPPVFLKVDWDK 141


>tr|Q75M67|Q75M67_ORYSJ Os03g0381300 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0011H24.18 PE=4 SV=1
          Length = 173

 Score = 47.4 bits (111), Expect = 4e-04
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = -2

Query: 389 WWKRLLKAEGKPPLFLKVDWNK 324
           WW RLLK EGKPP+FLKVDW+K
Sbjct: 86  WWPRLLKKEGKPPVFLKVDWDK 107


>tr|Q3I0N3|Q3I0N3_DACGL P23 OS=Dactylis glomerata PE=2 SV=1
          Length = 180

 Score = 47.4 bits (111), Expect = 4e-04
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = -2

Query: 389 WWKRLLKAEGKPPLFLKVDWNK 324
           WW RLLK EGKPP+FLKVDW+K
Sbjct: 85  WWPRLLKKEGKPPVFLKVDWDK 106


>tr|Q10KJ6|Q10KJ6_ORYSJ Expressed protein OS=Oryza sativa subsp.
           japonica GN=LOC_Os03g26460 PE=4 SV=1
          Length = 160

 Score = 47.4 bits (111), Expect = 4e-04
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = -2

Query: 389 WWKRLLKAEGKPPLFLKVDWNK 324
           WW RLLK EGKPP+FLKVDW+K
Sbjct: 86  WWPRLLKKEGKPPVFLKVDWDK 107


>tr|B4FLE3|B4FLE3_MAIZE Prostaglandin E synthase 3 OS=Zea mays PE=2
           SV=1
          Length = 176

 Score = 47.4 bits (111), Expect = 4e-04
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = -2

Query: 389 WWKRLLKAEGKPPLFLKVDWNK 324
           WW RLLK EGKPP+FLKVDW+K
Sbjct: 85  WWPRLLKQEGKPPVFLKVDWDK 106