BP920180
Clone id YMU001_000134_A04
Library
Length 428
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000134_A04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTGTTCGTAACTCAGGAAATGGCTACTACACATTCAACAAAATTACTCCAATGCACAACT
TAAGCTAAGCCTGAGGCTATCCTCAGAAAAGCAAATCATGGTCATGTCAAGAGGTAGATG
CATGAGTGCACAAATAAGACTTGGATGTTGCCCAACACCAACTGAACAAGCGAGTTGCCT
CTATGTTGAGTATACCATGTAGCTAGCTAGCTAGAAGTCGACACTTTACAAATATCTTCA
TATCCCACGGCATTCAATACCCTTCCATCATATATACCCTTCTCTACCTGCACTTTAGCT
GTGAATTTTGCAGTGTCAATTGCGAGAAGCTTTGCAGTGGAACCCCTGTATGCTCCATTC
ACAATCTTAACAAGGCCGCCAATTTGAGGTATAACCGTTTCCAACTCTTCTTGATCCACC
TTGAGGAT
■■Homology search results ■■ -
sp_hit_id Q8K339
Definition sp|Q8K339|KIN17_MOUSE DNA/RNA-binding protein KIN17 OS=Mus musculus
Align length 69
Score (bit) 59.7
E-value 5.0e-09
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920180|Adiantum capillus-veneris mRNA, clone:
YMU001_000134_A04.
(428 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8K339|KIN17_MOUSE DNA/RNA-binding protein KIN17 OS=Mus muscu... 60 5e-09
sp|O60870|KIN17_HUMAN DNA/RNA-binding protein KIN17 OS=Homo sapi... 59 6e-09
sp|Q55D16|KIN17_DICDI KIN17-like protein OS=Dictyostelium discoi... 53 6e-07
sp|Q9STN3|SPT51_ARATH Putative transcription elongation factor S... 38 0.015
sp|Q9C801|MOS2_ARATH Protein MOS2 OS=Arabidopsis thaliana GN=MOS... 35 0.13
sp|O02326|CFI1_CAEEL AT-rich interactive domain-containing prote... 32 1.4
sp|O80770|SPT52_ARATH Putative transcription elongation factor S... 30 4.1
sp|Q98QS1|RL10_MYCPU 50S ribosomal protein L10 OS=Mycoplasma pul... 30 4.1
sp|P0C6X3|R1AB_CVHN2 Replicase polyprotein 1ab OS=Human coronavi... 30 4.1
sp|Q6MRX8|RL10_MYCMS 50S ribosomal protein L10 OS=Mycoplasma myc... 30 5.3
sp|Q08791|YCXA_BACSU Uncharacterized MFS-type transporter ycxA O... 29 7.0
sp|Q09796|KA111_SCHPO Importin beta-like protein kap111 OS=Schiz... 29 7.0
sp|P41810|COPB_YEAST Coatomer subunit beta OS=Saccharomyces cere... 29 7.0
sp|Q6PAC4|CB071_MOUSE Uncharacterized protein C2orf71 homolog OS... 29 9.1

>sp|Q8K339|KIN17_MOUSE DNA/RNA-binding protein KIN17 OS=Mus musculus
GN=Kin PE=2 SV=1
Length = 391

Score = 59.7 bits (143), Expect = 5e-09
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = -1

Query: 425 LKVDQEELETVIPQIGGLVKIVNGAYRGSTAKLLAIDTAKFTAKVQVEKGIYDGRVLNAV 246
LK+DQ LETVIP G V ++NG YRG+ L +I+ F+A + +E G GR + +
Sbjct: 323 LKLDQTHLETVIPAPGKRVLVLNGGYRGNEGTLESINEKAFSATIVIETGPLKGRRVEGI 382

Query: 245 GYEDICKVS 219
YEDI K++
Sbjct: 383 QYEDISKLA 391


>sp|O60870|KIN17_HUMAN DNA/RNA-binding protein KIN17 OS=Homo sapiens
GN=KIN PE=1 SV=2
Length = 393

Score = 59.3 bits (142), Expect = 6e-09
Identities = 29/69 (42%), Positives = 43/69 (62%)
Frame = -1

Query: 425 LKVDQEELETVIPQIGGLVKIVNGAYRGSTAKLLAIDTAKFTAKVQVEKGIYDGRVLNAV 246
LK+DQ LETVIP G + ++NG YRG+ L +I+ F+A + +E G GR + +
Sbjct: 325 LKLDQTHLETVIPAPGKRILVLNGGYRGNEGTLESINEKTFSATIVIETGPLKGRRVEGI 384

Query: 245 GYEDICKVS 219
YEDI K++
Sbjct: 385 QYEDISKLA 393


>sp|Q55D16|KIN17_DICDI KIN17-like protein OS=Dictyostelium
discoideum GN=DDB_G0269816 PE=3 SV=1
Length = 445

Score = 52.8 bits (125), Expect = 6e-07
Identities = 30/68 (44%), Positives = 39/68 (57%)
Frame = -1

Query: 428 ILKVDQEELETVIPQIGGLVKIVNGAYRGSTAKLLAIDTAKFTAKVQVEKGIYDGRVLNA 249
ILK+DQ LETVIPQIG V IVNG YRG A + ++ F AK+ ++ D +
Sbjct: 380 ILKIDQTFLETVIPQIGSTVIIVNGKYRGKEATIKNVNFDDFNAKLYIK----DNDITIT 435

Query: 248 VGYEDICK 225
+ YE K
Sbjct: 436 LPYESFSK 443


>sp|Q9STN3|SPT51_ARATH Putative transcription elongation factor SPT5
homolog 1 OS=Arabidopsis thaliana GN=At4g08350 PE=2 SV=1
Length = 1054

Score = 38.1 bits (87), Expect = 0.015
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = -1

Query: 407 ELETVIPQIGGLVKIVNGAYRGSTAKLLAIDTAKFTAKV 291
ELE + P+ VKIV G YRGST KL+ ID + K+
Sbjct: 996 ELEIIPPRKSDRVKIVGGQYRGSTGKLIGIDGSDGIVKI 1034


>sp|Q9C801|MOS2_ARATH Protein MOS2 OS=Arabidopsis thaliana GN=MOS2
PE=2 SV=1
Length = 462

Score = 35.0 bits (79), Expect = 0.13
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = -1

Query: 419 VDQEELETVIPQIGGLVKIVNGAYRGSTAKLLAIDTAKFTAKVQ 288
VDQE LET +P+ GG V +++G ++G L+ D K T V+
Sbjct: 392 VDQELLETALPRRGGPVLVLSGKHKGVYGNLVEKDLDKETGVVR 435


>sp|O02326|CFI1_CAEEL AT-rich interactive domain-containing protein
cfi-1 OS=Caenorhabditis elegans GN=cfi-1 PE=1 SV=3
Length = 467

Score = 31.6 bits (70), Expect = 1.4
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Frame = -1

Query: 419 VDQEELETVIPQIGGLVKIVNGAYRGSTAKLL----AIDTAKFTAKVQVEKGIYD 267
+D EL ++ Q GGLV+I+N K L +I +A FT + Q +K +YD
Sbjct: 213 LDLYELYRLVVQHGGLVEIINKKLWREITKGLNLPSSITSAAFTLRTQYQKYLYD 267


>sp|O80770|SPT52_ARATH Putative transcription elongation factor SPT5
homolog 2 OS=Arabidopsis thaliana GN=At2g34210 PE=2 SV=1
Length = 990

Score = 30.0 bits (66), Expect = 4.1
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -1

Query: 425 LKVDQEELETVIPQIGGLVKIVNGAYRGSTAKLLAID 315
++ Q ++ V P+ VKI+ G Y GSTAK++ D
Sbjct: 926 IRATQNKVSLVCPKKNERVKILGGKYCGSTAKVIGED 962


>sp|Q98QS1|RL10_MYCPU 50S ribosomal protein L10 OS=Mycoplasma
pulmonis GN=rplJ PE=3 SV=2
Length = 168

Score = 30.0 bits (66), Expect = 4.1
Identities = 15/40 (37%), Positives = 28/40 (70%)
Frame = -1

Query: 335 AKLLAIDTAKFTAKVQVEKGIYDGRVLNAVGYEDICKVST 216
AK+LA + AK K+ ++ GI+DG+V++A G + + ++ T
Sbjct: 96 AKVLA-EFAKKNKKLVLKAGIFDGKVVDAAGVKAVAELPT 134


>sp|P0C6X3|R1AB_CVHN2 Replicase polyprotein 1ab OS=Human coronavirus
HKU1 (isolate N2) GN=rep PE=3 SV=1
Length = 7152

Score = 30.0 bits (66), Expect = 4.1
Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 11/61 (18%)
Frame = +3

Query: 186 LSIPCS*LARSRHFTNIFISHGIQYPSII------YTLLYL-----HFSCEFCSVNCEKL 332
L+ C +A FT F G + P I+ YT+L L HF C CSV CE L
Sbjct: 4516 LTKSCGVVAEHDFFT--FDIDGSRVPHIVRKNLSKYTMLDLCYALRHFDCNDCSVLCEIL 4573

Query: 333 C 335
C
Sbjct: 4574 C 4574


>sp|Q6MRX8|RL10_MYCMS 50S ribosomal protein L10 OS=Mycoplasma
mycoides subsp. mycoides SC GN=rplJ PE=3 SV=1
Length = 165

Score = 29.6 bits (65), Expect = 5.3
Identities = 15/50 (30%), Positives = 31/50 (62%)
Frame = -1

Query: 341 STAKLLAIDTAKFTAKVQVEKGIYDGRVLNAVGYEDICKVSTSS*LATWY 192
S AKL+A + AK ++++ GIY+G+V++ VG ++ + + L + +
Sbjct: 94 SAAKLVA-NFAKKNEALKLKAGIYEGKVVDTVGINEVASLPSKEELYSMF 142


tr_hit_id A7PGR8
Definition tr|A7PGR8|A7PGR8_VITVI Chromosome chr17 scaffold_16, whole genome shotgun sequence OS=Vitis vinifera
Align length 69
Score (bit) 118.0
E-value 1.0e-25
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920180|Adiantum capillus-veneris mRNA, clone:
YMU001_000134_A04.
(428 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7PGR8|A7PGR8_VITVI Chromosome chr17 scaffold_16, whole genom... 118 1e-25
tr|B4G0P8|B4G0P8_MAIZE Antigenic determinant of rec-A protein OS... 117 2e-25
tr|B4FWL3|B4FWL3_MAIZE Putative uncharacterized protein OS=Zea m... 116 5e-25
tr|Q75LU5|Q75LU5_ORYSJ Os03g0570300 protein OS=Oryza sativa subs... 114 2e-24
tr|A3AJQ2|A3AJQ2_ORYSJ Putative uncharacterized protein OS=Oryza... 114 2e-24
tr|A2XIP9|A2XIP9_ORYSI Putative uncharacterized protein OS=Oryza... 114 2e-24
tr|B7FK30|B7FK30_MEDTR Putative uncharacterized protein OS=Medic... 113 4e-24
tr|Q9ZVU5|Q9ZVU5_ARATH T5A14.13 protein (Putative uncharacterize... 113 5e-24
tr|Q3E8C8|Q3E8C8_ARATH Uncharacterized protein At5g51795.1 OS=Ar... 107 2e-22
tr|A9RNE1|A9RNE1_PHYPA Predicted protein OS=Physcomitrella paten... 104 3e-21
tr|B7PVS7|B7PVS7_IXOSC Putative uncharacterized protein (Fragmen... 79 1e-13
tr|A7SDF8|A7SDF8_NEMVE Predicted protein OS=Nematostella vectens... 74 3e-12
tr|B6M139|B6M139_BRAFL Putative uncharacterized protein OS=Branc... 73 8e-12
tr|B0X0S8|B0X0S8_CULQU Kin17 OS=Culex quinquefasciatus GN=CpipJ_... 72 2e-11
tr|Q17PQ1|Q17PQ1_AEDAE Putative uncharacterized protein OS=Aedes... 71 2e-11
tr|Q2M0V0|Q2M0V0_DROPS GA19031 OS=Drosophila pseudoobscura pseud... 70 5e-11
tr|Q7PGA1|Q7PGA1_ANOGA AGAP010352-PA OS=Anopheles gambiae GN=AGA... 69 9e-11
tr|B4KY22|B4KY22_DROMO GI13384 OS=Drosophila mojavensis GN=GI133... 69 1e-10
tr|B4LGF0|B4LGF0_DROVI GJ11508 OS=Drosophila virilis GN=GJ11508 ... 67 3e-10
tr|B3M977|B3M977_DROAN GF10331 OS=Drosophila ananassae GN=GF1033... 67 3e-10
tr|B4MLK3|B4MLK3_DROWI GK16954 OS=Drosophila willistoni GN=GK169... 67 4e-10
tr|B4PFA4|B4PFA4_DROYA Kin17 OS=Drosophila yakuba GN=Dyak\kin17 ... 67 6e-10
tr|B4IUF5|B4IUF5_DROYA GE23233 (Fragment) OS=Drosophila yakuba G... 67 6e-10
tr|B3NIJ9|B3NIJ9_DROER GG16104 OS=Drosophila erecta GN=GG16104 P... 67 6e-10
tr|Q9VPH4|Q9VPH4_DROME FI03293p OS=Drosophila melanogaster GN=ki... 65 1e-09
tr|Q8SXR2|Q8SXR2_DROME RE65257p OS=Drosophila melanogaster GN=ki... 65 1e-09
tr|B4QRX4|B4QRX4_DROSI GD14878 OS=Drosophila simulans GN=GD14878... 65 1e-09
tr|B4IWX3|B4IWX3_DROGR GH14731 OS=Drosophila grimshawi GN=GH1473... 65 1e-09
tr|B4IA87|B4IA87_DROSE GM22280 OS=Drosophila sechellia GN=GM2228... 65 1e-09
tr|A8PPG3|A8PPG3_BRUMA Kin17, putative OS=Brugia malayi GN=Bm1_3... 65 1e-09

>tr|A7PGR8|A7PGR8_VITVI Chromosome chr17 scaffold_16, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00017659001
PE=4 SV=1
Length = 391

Score = 118 bits (296), Expect = 1e-25
Identities = 56/69 (81%), Positives = 65/69 (94%)
Frame = -1

Query: 428 ILKVDQEELETVIPQIGGLVKIVNGAYRGSTAKLLAIDTAKFTAKVQVEKGIYDGRVLNA 249
+L+VDQEELETVIPQIGGL++IVNGAYRGS A+LLA+DT K++AKVQ+EKGIYDGRVL A
Sbjct: 321 VLRVDQEELETVIPQIGGLLRIVNGAYRGSNARLLAVDTEKYSAKVQIEKGIYDGRVLQA 380

Query: 248 VGYEDICKV 222
V YEDICKV
Sbjct: 381 VEYEDICKV 389


>tr|B4G0P8|B4G0P8_MAIZE Antigenic determinant of rec-A protein
OS=Zea mays PE=2 SV=1
Length = 424

Score = 117 bits (294), Expect = 2e-25
Identities = 55/71 (77%), Positives = 66/71 (92%)
Frame = -1

Query: 428 ILKVDQEELETVIPQIGGLVKIVNGAYRGSTAKLLAIDTAKFTAKVQVEKGIYDGRVLNA 249
+L+VDQ+ELETVIPQIGGLV+IVNGAYRGS A+LL++DT KF AKVQVEKG+YDG+VL A
Sbjct: 354 VLRVDQDELETVIPQIGGLVRIVNGAYRGSNARLLSVDTEKFCAKVQVEKGLYDGKVLRA 413

Query: 248 VGYEDICKVST 216
V YEDICK+S+
Sbjct: 414 VEYEDICKISS 424


>tr|B4FWL3|B4FWL3_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 423

Score = 116 bits (291), Expect = 5e-25
Identities = 54/71 (76%), Positives = 66/71 (92%)
Frame = -1

Query: 428 ILKVDQEELETVIPQIGGLVKIVNGAYRGSTAKLLAIDTAKFTAKVQVEKGIYDGRVLNA 249
+L+VDQ+ELETVIPQIGGLV+I+NGAYRGS A+LL++DT KF AKVQVEKG+YDG+VL A
Sbjct: 353 VLRVDQDELETVIPQIGGLVRILNGAYRGSNARLLSVDTEKFCAKVQVEKGLYDGKVLRA 412

Query: 248 VGYEDICKVST 216
V YEDICK+S+
Sbjct: 413 VKYEDICKISS 423


>tr|Q75LU5|Q75LU5_ORYSJ Os03g0570300 protein OS=Oryza sativa subsp.
japonica GN=OSJNBb0015I21.3 PE=2 SV=1
Length = 430

Score = 114 bits (285), Expect = 2e-24
Identities = 52/69 (75%), Positives = 64/69 (92%)
Frame = -1

Query: 428 ILKVDQEELETVIPQIGGLVKIVNGAYRGSTAKLLAIDTAKFTAKVQVEKGIYDGRVLNA 249
+L+VDQ+ELETVIPQIGGLV+IVNGAYRGS A+LL++DT +F AKVQVEKG+YDG+VL A
Sbjct: 360 VLRVDQDELETVIPQIGGLVRIVNGAYRGSNARLLSVDTERFCAKVQVEKGLYDGKVLKA 419

Query: 248 VGYEDICKV 222
+ YEDICK+
Sbjct: 420 IEYEDICKI 428


>tr|A3AJQ2|A3AJQ2_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_011024 PE=4 SV=1
Length = 411

Score = 114 bits (285), Expect = 2e-24
Identities = 52/69 (75%), Positives = 64/69 (92%)
Frame = -1

Query: 428 ILKVDQEELETVIPQIGGLVKIVNGAYRGSTAKLLAIDTAKFTAKVQVEKGIYDGRVLNA 249
+L+VDQ+ELETVIPQIGGLV+IVNGAYRGS A+LL++DT +F AKVQVEKG+YDG+VL A
Sbjct: 341 VLRVDQDELETVIPQIGGLVRIVNGAYRGSNARLLSVDTERFCAKVQVEKGLYDGKVLKA 400

Query: 248 VGYEDICKV 222
+ YEDICK+
Sbjct: 401 IEYEDICKI 409


>tr|A2XIP9|A2XIP9_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_12309 PE=4 SV=1
Length = 430

Score = 114 bits (285), Expect = 2e-24
Identities = 52/69 (75%), Positives = 64/69 (92%)
Frame = -1

Query: 428 ILKVDQEELETVIPQIGGLVKIVNGAYRGSTAKLLAIDTAKFTAKVQVEKGIYDGRVLNA 249
+L+VDQ+ELETVIPQIGGLV+IVNGAYRGS A+LL++DT +F AKVQVEKG+YDG+VL A
Sbjct: 360 VLRVDQDELETVIPQIGGLVRIVNGAYRGSNARLLSVDTERFCAKVQVEKGLYDGKVLKA 419

Query: 248 VGYEDICKV 222
+ YEDICK+
Sbjct: 420 IEYEDICKI 428


>tr|B7FK30|B7FK30_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=2 SV=1
Length = 398

Score = 113 bits (283), Expect = 4e-24
Identities = 54/70 (77%), Positives = 62/70 (88%)
Frame = -1

Query: 428 ILKVDQEELETVIPQIGGLVKIVNGAYRGSTAKLLAIDTAKFTAKVQVEKGIYDGRVLNA 249
+L+VDQEELETVIPQ+GG VKIVNGAYRGS A+LL +DT +F AKVQ+EKG YDGRVL A
Sbjct: 329 VLRVDQEELETVIPQVGGRVKIVNGAYRGSLARLLGVDTDRFCAKVQIEKGAYDGRVLKA 388

Query: 248 VGYEDICKVS 219
V YEDICKV+
Sbjct: 389 VEYEDICKVA 398


>tr|Q9ZVU5|Q9ZVU5_ARATH T5A14.13 protein (Putative uncharacterized
protein At1g55460) OS=Arabidopsis thaliana GN=At1g55460
PE=2 SV=1
Length = 411

Score = 113 bits (282), Expect = 5e-24
Identities = 50/70 (71%), Positives = 64/70 (91%)
Frame = -1

Query: 428 ILKVDQEELETVIPQIGGLVKIVNGAYRGSTAKLLAIDTAKFTAKVQVEKGIYDGRVLNA 249
+L+VDQ+ELETV+PQIGG+VKIVNGAYRGS A+LL +DT KF AKVQ+EKG+YDGRV+ +
Sbjct: 342 VLRVDQKELETVLPQIGGMVKIVNGAYRGSNARLLGVDTEKFCAKVQIEKGVYDGRVIKS 401

Query: 248 VGYEDICKVS 219
+ YEDICK++
Sbjct: 402 IEYEDICKLA 411


>tr|Q3E8C8|Q3E8C8_ARATH Uncharacterized protein At5g51795.1
OS=Arabidopsis thaliana GN=At5g51795 PE=4 SV=1
Length = 347

Score = 107 bits (268), Expect = 2e-22
Identities = 48/70 (68%), Positives = 62/70 (88%)
Frame = -1

Query: 428 ILKVDQEELETVIPQIGGLVKIVNGAYRGSTAKLLAIDTAKFTAKVQVEKGIYDGRVLNA 249
+L+VDQ EL+TV+PQIGG+VKIVNGAYRGS +LL +DT KF AKVQ+EKG+YDGRV+ +
Sbjct: 278 VLRVDQVELKTVLPQIGGMVKIVNGAYRGSNTRLLDLDTEKFCAKVQIEKGVYDGRVIKS 337

Query: 248 VGYEDICKVS 219
+ YEDICK++
Sbjct: 338 IEYEDICKLA 347


>tr|A9RNE1|A9RNE1_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_176664 PE=4 SV=1
Length = 391

Score = 104 bits (259), Expect = 3e-21
Identities = 49/69 (71%), Positives = 61/69 (88%)
Frame = -1

Query: 428 ILKVDQEELETVIPQIGGLVKIVNGAYRGSTAKLLAIDTAKFTAKVQVEKGIYDGRVLNA 249
+LKVDQEELETVIPQIGG+V+IVNGAYRGS A+LL+IDT+KF A V++E G +DGR++ A
Sbjct: 322 VLKVDQEELETVIPQIGGVVRIVNGAYRGSNARLLSIDTSKFAASVRIENGAFDGRIITA 381

Query: 248 VGYEDICKV 222
YEDICK+
Sbjct: 382 -DYEDICKI 389