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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920187
Clone id YMU001_000134_A12
Library
Length 506
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000134_A12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTTTTTTACAAGTTATGCAGACGCTTCTCTATTCCCACTTGGCATGCTGGAGGTGTTGTC
CTCGACATGATGAAAGAAGTAAAAGTCTCTGGTGGAGAGCACCCTCTGATACAAAAATTC
AGCCGAGGTTTCTTCTCAAGAGTACACAGGTTCATAAGAATATCACAACATTACCAAACC
TCACGTTTCTCTCCGTGGTCTCCTATGTCGAGTAGCAAATACTTCCTCTGCCACTGCATT
CTCCTCAGTCACCTTCTCCTTCCCTTTTTCTTTGTCCCTAGACTTCTCAGAGCTTTTAAT
ATCATCATCAGGAGTGATATCATCTTTCTTCGCCTTCGCCAATGATGCCTTCTTCGATAT
TTTGCTCCTCTTTCCCATGAAAAGGAACCAGAAAATGAGAATCAGACCAAAAGGCACGAC
ACCTCCAAAGATGCCCAGCACAGCCACTGGATTCTCCTCCCCTCTCTCAATAAATTCCAC
AAGCTTGTCCTTCTGCGATGCCAACA
■■Homology search results ■■ -
sp_hit_id O82709
Definition sp|O82709|CALX_PEA Calnexin homolog OS=Pisum sativum
Align length 106
Score (bit) 40.4
E-value 0.005
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920187|Adiantum capillus-veneris mRNA, clone:
YMU001_000134_A12.
         (506 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O82709|CALX_PEA Calnexin homolog OS=Pisum sativum PE=2 SV=1         40   0.005
sp|Q39817|CALX_SOYBN Calnexin homolog OS=Glycine max PE=2 SV=1         38   0.031
sp|P55062|BI1_RAT Bax inhibitor 1 OS=Rattus norvegicus GN=Tmbim6...    30   4.9  
sp|Q9D2C7|BI1_MOUSE Bax inhibitor 1 OS=Mus musculus GN=Tmbim6 PE...    30   4.9  
sp|Q819I5|PPK_BACCR Polyphosphate kinase OS=Bacillus cereus (str...    30   6.5  
sp|Q39994|CALX_HELTU Calnexin homolog OS=Helianthus tuberosus PE...    30   6.5  

>sp|O82709|CALX_PEA Calnexin homolog OS=Pisum sativum PE=2 SV=1
          Length = 551

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 30/106 (28%), Positives = 48/106 (45%)
 Frame = -3

Query: 504 LASQKDKLVEFIERGEENPVAVLGIFGGVVPFGLILIFWFLFMGXXXXXXXXXXXXXXXX 325
           L+ QK+K++E IE+GE+ P   +GI   VV   + + F  +F G                
Sbjct: 459 LSGQKEKIIEIIEKGEKQPNLTIGIIVSVVIVFVSIFFRLIFGG------------KKPA 506

Query: 324 XXXXXXXXXKSSEKSRDKEKGKEKVTEENAVAEEVFATRHRRPRRE 187
                    K++ ++  K+ G EK  E+N   EE      RRP+R+
Sbjct: 507 NVEANVEKKKTNTETTSKQDGGEK--EDNKEKEETANPPRRRPKRD 550


>sp|Q39817|CALX_SOYBN Calnexin homolog OS=Glycine max PE=2 SV=1
          Length = 546

 Score = 37.7 bits (86), Expect = 0.031
 Identities = 30/107 (28%), Positives = 41/107 (38%)
 Frame = -3

Query: 504 LASQKDKLVEFIERGEENPVAVLGIFGGVVPFGLILIFWFLFMGXXXXXXXXXXXXXXXX 325
           L+  K K+ + IE+ E+ P   +GI   VV   + + F  +F G                
Sbjct: 454 LSEHKSKIFDLIEKAEKQPNLTIGILVAVVVVFVSIFFRLIFGGKKPAKVEKKPERTEAS 513

Query: 324 XXXXXXXXXKSSEKSRDKEKGKEKVTEENAVAEEVFATRHRRPRRET 184
                     S E   +KEK K+K    NA          RRPRRET
Sbjct: 514 NNQG------SGENEENKEKEKQKEEASNAA--------RRRPRRET 546


>sp|P55062|BI1_RAT Bax inhibitor 1 OS=Rattus norvegicus GN=Tmbim6
           PE=2 SV=2
          Length = 237

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = -1

Query: 218 LLLDIGDHGEKREVW*CCDILMNLCTLEKK 129
           L+++  +HG+K  +W C D+ ++  TL +K
Sbjct: 191 LIIEKAEHGDKDYIWHCIDLFLDFVTLFRK 220


>sp|Q9D2C7|BI1_MOUSE Bax inhibitor 1 OS=Mus musculus GN=Tmbim6 PE=2
           SV=1
          Length = 237

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = -1

Query: 218 LLLDIGDHGEKREVW*CCDILMNLCTLEKK 129
           L+++  +HG+K  +W C D+ ++  TL +K
Sbjct: 191 LIIEKAEHGDKDYIWHCVDLFLDFVTLFRK 220


>sp|Q819I5|PPK_BACCR Polyphosphate kinase OS=Bacillus cereus (strain
           ATCC 14579 / DSM 31) GN=ppk PE=3 SV=1
          Length = 702

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +1

Query: 370 LSHEKEPENENQTKRHDTSKDAQHSHWILLPSLNKFHKLVLL 495
           L  EK+ E EN+TK       +    +I+LPS  + HK +LL
Sbjct: 174 LYDEKQAEEENRTKLGIVQVPSLLERFIILPSEGQKHKFILL 215


>sp|Q39994|CALX_HELTU Calnexin homolog OS=Helianthus tuberosus PE=2
           SV=1
          Length = 540

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 25/107 (23%), Positives = 41/107 (38%)
 Frame = -3

Query: 504 LASQKDKLVEFIERGEENPVAVLGIFGGVVPFGLILIFWFLFMGXXXXXXXXXXXXXXXX 325
           L   K K++E IE+ E  P   +G+   ++     ++   LF G                
Sbjct: 448 LGDHKVKVLELIEKAETQPNITIGVIVSIIVVIFSILLKLLFGGKKAAPKVNVVPKKKEE 507

Query: 324 XXXXXXXXXKSSEKSRDKEKGKEKVTEENAVAEEVFATRHRRPRRET 184
                      +  + +  +G+E+ TE      EV A   RRPRR+T
Sbjct: 508 P---------EASNTAEVREGEEEKTEG-----EVAAAPRRRPRRDT 540
tr_hit_id B7FLQ0
Definition tr|B7FLQ0|B7FLQ0_MEDTR Putative uncharacterized protein OS=Medicago truncatula
Align length 106
Score (bit) 43.1
E-value 0.008
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920187|Adiantum capillus-veneris mRNA, clone:
YMU001_000134_A12.
         (506 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B7FLQ0|B7FLQ0_MEDTR Putative uncharacterized protein OS=Medic...    43   0.008
tr|Q5NT70|Q5NT70_SOYBN Calnexin OS=Glycine max GN=Gm cnx-1 PE=2 ...    35   1.6  
tr|A5BCC8|A5BCC8_VITVI Putative uncharacterized protein OS=Vitis...    35   2.1  
tr|A2XT12|A2XT12_ORYSI Putative uncharacterized protein OS=Oryza...    35   2.1  
tr|B6TNF1|B6TNF1_MAIZE Calnexin OS=Zea mays PE=2 SV=1                  34   3.5  
tr|Q41798|Q41798_MAIZE Calnexin (Fragment) OS=Zea mays GN=CNX PE...    34   4.6  
tr|B4FAK8|B4FAK8_MAIZE Putative uncharacterized protein OS=Zea m...    34   4.6  
tr|A7R0W4|A7R0W4_VITVI Chromosome chr12 scaffold_326, whole geno...    34   4.6  
tr|A5KC70|A5KC70_PLAVI Ferrodoxin reductase, putative OS=Plasmod...    33   6.0  

>tr|B7FLQ0|B7FLQ0_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 541

 Score = 43.1 bits (100), Expect = 0.008
 Identities = 29/106 (27%), Positives = 46/106 (43%)
 Frame = -3

Query: 504 LASQKDKLVEFIERGEENPVAVLGIFGGVVPFGLILIFWFLFMGXXXXXXXXXXXXXXXX 325
           L+ QKDK++E IE+GE+ P   +GI   VV   + + F  +F G                
Sbjct: 449 LSGQKDKIIEIIEKGEKQPNLTIGILASVVVVFVTIFFRLIFGG------------KKPA 496

Query: 324 XXXXXXXXXKSSEKSRDKEKGKEKVTEENAVAEEVFATRHRRPRRE 187
                     ++E++   + G E   E+N   EE      RRP+R+
Sbjct: 497 KVEAKVEKKTNTERTETSQAGGE--NEDNKEKEETANAPRRRPKRD 540


>tr|Q5NT70|Q5NT70_SOYBN Calnexin OS=Glycine max GN=Gm cnx-1 PE=2
           SV=1
          Length = 546

 Score = 35.4 bits (80), Expect = 1.6
 Identities = 29/107 (27%), Positives = 40/107 (37%)
 Frame = -3

Query: 504 LASQKDKLVEFIERGEENPVAVLGIFGGVVPFGLILIFWFLFMGXXXXXXXXXXXXXXXX 325
           L+  K K+ + IE+ E+ P   +GI   VV   + +    +F G                
Sbjct: 454 LSEHKSKIFDLIEKAEKQPNLTIGILVAVVVVFVSIFLRLIFGGKKPAKVEKKPERTEAS 513

Query: 324 XXXXXXXXXKSSEKSRDKEKGKEKVTEENAVAEEVFATRHRRPRRET 184
                     S E   +KEK K+K    NA          RRPRRET
Sbjct: 514 NNQG------SGENEENKEKEKQKEEASNAA--------RRRPRRET 546


>tr|A5BCC8|A5BCC8_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_041895 PE=4 SV=1
          Length = 539

 Score = 35.0 bits (79), Expect = 2.1
 Identities = 31/106 (29%), Positives = 44/106 (41%)
 Frame = -3

Query: 504 LASQKDKLVEFIERGEENPVAVLGIFGGVVPFGLILIFWFLFMGXXXXXXXXXXXXXXXX 325
           L + K KL++ IE+GE+ P   +GI   +V   L +IF  +F G                
Sbjct: 446 LNAYKPKLLDLIEKGEKQPNLTIGILVSIVIVFLTIIFKIIFGGKKPXKITRQTNNSTV- 504

Query: 324 XXXXXXXXXKSSEKSRDKEKGKEKVTEENAVAEEVFATRHRRPRRE 187
                      +E S D+   +EK  EEN   +     R R  RRE
Sbjct: 505 -----------AETSNDQGSSREK-EEENEEEDTNAPPRKRSTRRE 538


>tr|A2XT12|A2XT12_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_15749 PE=4 SV=1
          Length = 537

 Score = 35.0 bits (79), Expect = 2.1
 Identities = 29/107 (27%), Positives = 45/107 (42%)
 Frame = -3

Query: 504 LASQKDKLVEFIERGEENPVAVLGIFGGVVPFGLILIFWFLFMGXXXXXXXXXXXXXXXX 325
           L   K K+++ IE+GE+ P   +GI   +V   + ++F  LF G                
Sbjct: 441 LEPYKTKIIDVIEKGEKQPNITIGILVSIVVVFVTVLFRILFGG----KKPAAPVKPVAE 496

Query: 324 XXXXXXXXXKSSEKSRDKEKGKEKVTEENAVAEEVFATRHRRPRRET 184
                    +++  S DKE  KE+  ++ A A        RR RRET
Sbjct: 497 VKKPKSTESEAAGSSGDKEDEKEEEEKDGAAAP------RRRSRRET 537


>tr|B6TNF1|B6TNF1_MAIZE Calnexin OS=Zea mays PE=2 SV=1
          Length = 534

 Score = 34.3 bits (77), Expect = 3.5
 Identities = 17/44 (38%), Positives = 26/44 (59%)
 Frame = -3

Query: 504 LASQKDKLVEFIERGEENPVAVLGIFGGVVPFGLILIFWFLFMG 373
           LA  K K+++ IE+GE+ P   +GI   VV   + ++F  LF G
Sbjct: 440 LAPYKTKIIDVIEKGEKQPNITIGILVSVVVVFVTVLFKILFGG 483


>tr|Q41798|Q41798_MAIZE Calnexin (Fragment) OS=Zea mays GN=CNX PE=2
           SV=1
          Length = 428

 Score = 33.9 bits (76), Expect = 4.6
 Identities = 17/44 (38%), Positives = 26/44 (59%)
 Frame = -3

Query: 504 LASQKDKLVEFIERGEENPVAVLGIFGGVVPFGLILIFWFLFMG 373
           LA  K K+++ IE+GE+ P   +GI   VV   + ++F  LF G
Sbjct: 333 LAPYKTKIIDVIEKGEKQPNITIGILVSVVIVFVTVLFKILFGG 376


>tr|B4FAK8|B4FAK8_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 532

 Score = 33.9 bits (76), Expect = 4.6
 Identities = 17/44 (38%), Positives = 26/44 (59%)
 Frame = -3

Query: 504 LASQKDKLVEFIERGEENPVAVLGIFGGVVPFGLILIFWFLFMG 373
           LA  K K+++ IE+GE+ P   +GI   VV   + ++F  LF G
Sbjct: 439 LAPYKTKIIDVIEKGEKQPNITIGILVSVVIVFVTVLFKILFGG 482


>tr|A7R0W4|A7R0W4_VITVI Chromosome chr12 scaffold_326, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00011650001
           PE=4 SV=1
          Length = 542

 Score = 33.9 bits (76), Expect = 4.6
 Identities = 17/44 (38%), Positives = 26/44 (59%)
 Frame = -3

Query: 504 LASQKDKLVEFIERGEENPVAVLGIFGGVVPFGLILIFWFLFMG 373
           L + K KL++ IE+GE+ P   +GI   +V   L +IF  +F G
Sbjct: 446 LNAYKPKLLDLIEKGEKQPNLTIGILVSIVIVFLTIIFKIIFGG 489


>tr|A5KC70|A5KC70_PLAVI Ferrodoxin reductase, putative OS=Plasmodium
           vivax GN=PVX_096305 PE=4 SV=1
          Length = 651

 Score = 33.5 bits (75), Expect = 6.0
 Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 5/38 (13%)
 Frame = +1

Query: 49  GGVVLDMMKEVKVS--GGEHP---LIQKFSRGFFSRVH 147
           G VVLD++KE KV+  GG HP   +I +   GF  RVH
Sbjct: 405 GSVVLDILKEQKVTFHGGVHPTEYIIDRGGGGFLKRVH 442