BP920188
Clone id YMU001_000134_B01
Library
Length 399
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000134_B01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GGCTGGTACACGCAACATGGTAATTGAGCAGGTATTGGACAGTTAGATGAGTCTGGCGGG
GAATTCTCCTATGTACAGCCTGTTTCTGAGGTCAGACCTGACTATATCCTACATTGCTCC
TTGTGCCTTGTACCTCTCGCTTCTAACAGACAAGAGAGCAGACCATCCTAGATATGGTGT
TGGAGGTGTCGCGACAGGCTTCATACAATACCGCTAAGAAGCTGATGGCTTTTCAAGATG
ATACTAATCCTAATTATATCTAGTGAACACTGATGGCAAGTAATGATGACCTATAACTAG
GTTTACTCATGGGAATCTGTGGTCTATTCTGAGGCGATGCCTACGATGTCTACTAAAGGG
AGAAAAGAGATGGCTGTAAATGGTGGGCTCTATATAGAT
■■Homology search results ■■ -
sp_hit_id Q9VWF2
Definition sp|Q9VWF2|SAYP_DROME Supporter of activation of yellow protein OS=Drosophila melanogaster
Align length 59
Score (bit) 30.4
E-value 2.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920188|Adiantum capillus-veneris mRNA, clone:
YMU001_000134_B01.
(399 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9VWF2|SAYP_DROME Supporter of activation of yellow protein O... 30 2.8

>sp|Q9VWF2|SAYP_DROME Supporter of activation of yellow protein
OS=Drosophila melanogaster GN=e(y)3 PE=2 SV=3
Length = 2006

Score = 30.4 bits (67), Expect = 2.8
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = +1

Query: 28 AGIGQLDESGGEFSYVQPVSEVRPDYILHCSLCLVPLASNRQESRPS*IWCWRCRDRLH 204
+G G DE G E S S VR + C +CL N ++ + I C+ CR R+H
Sbjct: 1674 SGAGSEDEDGNECS-----SSVR---LSTCGVCLRSQHRNARDMPEAFIRCYTCRKRVH 1724


tr_hit_id A4AJT4
Definition tr|A4AJT4|A4AJT4_9ACTN Primosome assembly protein PriA OS=marine actinobacterium PHSC20C1
Align length 33
Score (bit) 33.5
E-value 5.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920188|Adiantum capillus-veneris mRNA, clone:
YMU001_000134_B01.
(399 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A4AJT4|A4AJT4_9ACTN Primosome assembly protein PriA OS=marine... 33 5.4
tr|B4PZF1|B4PZF1_DROYA GE17369 OS=Drosophila yakuba GN=GE17369 P... 33 7.0

>tr|A4AJT4|A4AJT4_9ACTN Primosome assembly protein PriA OS=marine
actinobacterium PHSC20C1 GN=A20C1_02996 PE=4 SV=1
Length = 658

Score = 33.5 bits (75), Expect = 5.4
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 6/33 (18%)
Frame = +1

Query: 115 CSLCLVPLASNRQESRPS*IWC------WRCRD 195
C+ C PLA S PS +WC WRCR+
Sbjct: 389 CTTCAGPLAQRSASSTPSCVWCGALAAKWRCRE 421


>tr|B4PZF1|B4PZF1_DROYA GE17369 OS=Drosophila yakuba GN=GE17369 PE=4
SV=1
Length = 2002

Score = 33.1 bits (74), Expect = 7.0
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +1

Query: 28 AGIGQLDESGGEFSYVQPVSEVRPDYILHCSLCLVPLASNRQESRPS*IWCWRCRDRLH 204
+G G DE G EFS +S +C +CL N ++ + I C+ CR R+H
Sbjct: 1675 SGAGSEDEDGNEFSSSTRLS--------NCGVCLRSQHRNARDMPEAFIRCYTCRKRVH 1725