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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920190
Clone id YMU001_000134_B03
Library
Length 541
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000134_B03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTTTTTTTTTTTTTTTTCAACAAAAAAAACAGTTTGAAAGATGTTTTTCCCACCAGATAC
TCTCCTAGACTTTGTCTAAACTTGTATTTTCAGGGAGACAATTGAGGTGATTGTCATGTA
CAAAAGGCTCAACCCACTACAGCATTTCCTAAGAACATTGTATTCTCCCTTATCAAGCAA
AACTGGGGCTCATAAGAACAATTCTGCCCTATTAACTGTGAGGATCATATGACCCATCAA
ACCTGTAGGTTATAAAGTGCTTCGGTTGCAGAAGAGATGCCCCTGTTCTGACCTATTCAA
AAATTCGTCCAAAGATGACATCCAATCAGACTCAAGCTTCCTCAGGCTGAATTCATTGAT
GTTGTTGAATAGAATCTAAGATGTGCTCCAGTCTATGCTTCATTAAAGGCTGACCAGAAT
TGGTCCTTTTGAACATCTTAGCCTTCAAATTCTTTCTTGTCTGCAAGGCTTTTGACCTAA
CTTCCTCCTTGGCTTTCAAGGCTTCCAGCCTTTCTGCTTTCAGTCTGTCCTCTTCTTCGA
G
■■Homology search results ■■ -
sp_hit_id Q6C4R3
Definition sp|Q6C4R3|FYV7_YARLI rRNA-processing protein FYV7 OS=Yarrowia lipolytica
Align length 39
Score (bit) 36.2
E-value 0.097
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920190|Adiantum capillus-veneris mRNA, clone:
YMU001_000134_B03.
         (524 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6C4R3|FYV7_YARLI rRNA-processing protein FYV7 OS=Yarrowia li...    36   0.097
sp|Q12247|FYV7_YEAST rRNA-processing protein FYV7 OS=Saccharomyc...    36   0.13 
sp|Q6FUQ5|FYV7_CANGA rRNA-processing protein FYV7 OS=Candida gla...    35   0.22 
sp|Q6BPI5|FYV7_DEBHA rRNA-processing protein FYV7 OS=Debaryomyce...    33   0.82 
sp|O14276|FYV7_SCHPO rRNA-processing protein fyv7 OS=Schizosacch...    31   3.1  

>sp|Q6C4R3|FYV7_YARLI rRNA-processing protein FYV7 OS=Yarrowia
           lipolytica GN=FYV7 PE=3 SV=1
          Length = 229

 Score = 36.2 bits (82), Expect = 0.097
 Identities = 17/39 (43%), Positives = 24/39 (61%)
 Frame = -1

Query: 461 RSKALQTRKNLKAKMFKRTNSGQPLMKHRLEHILDSIQQ 345
           R + L+ R  L  +M K T +GQPLM  R+  ILD ++Q
Sbjct: 191 RERKLKKRAKLTKQMTKTTRTGQPLMTPRINKILDQLKQ 229


>sp|Q12247|FYV7_YEAST rRNA-processing protein FYV7 OS=Saccharomyces
           cerevisiae GN=FYV7 PE=1 SV=1
          Length = 151

 Score = 35.8 bits (81), Expect = 0.13
 Identities = 16/39 (41%), Positives = 26/39 (66%)
 Frame = -1

Query: 464 VRSKALQTRKNLKAKMFKRTNSGQPLMKHRLEHILDSIQ 348
           V  +  Q R++ K K+ +RT +GQPLM  ++E +LD I+
Sbjct: 106 VSKEKFQRREDRKKKLTQRTRTGQPLMGPKIEDLLDKIK 144


>sp|Q6FUQ5|FYV7_CANGA rRNA-processing protein FYV7 OS=Candida
           glabrata GN=FYV7 PE=3 SV=1
          Length = 152

 Score = 35.0 bits (79), Expect = 0.22
 Identities = 16/33 (48%), Positives = 22/33 (66%)
 Frame = -1

Query: 446 QTRKNLKAKMFKRTNSGQPLMKHRLEHILDSIQ 348
           Q R+  + KM KRT SGQPLM  ++E +L  I+
Sbjct: 113 QEREQKRRKMTKRTRSGQPLMAPKIEDLLSKIK 145


>sp|Q6BPI5|FYV7_DEBHA rRNA-processing protein FYV7 OS=Debaryomyces
           hansenii GN=FYV7 PE=3 SV=2
          Length = 157

 Score = 33.1 bits (74), Expect = 0.82
 Identities = 15/37 (40%), Positives = 24/37 (64%)
 Frame = -1

Query: 455 KALQTRKNLKAKMFKRTNSGQPLMKHRLEHILDSIQQ 345
           K  + R+  K  + K+T SGQPLM  R+ ++LD I++
Sbjct: 118 KKSKERERRKDNLSKKTKSGQPLMGPRINNLLDKIKK 154


>sp|O14276|FYV7_SCHPO rRNA-processing protein fyv7
           OS=Schizosaccharomyces pombe GN=fyv7 PE=2 SV=1
          Length = 144

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 11/37 (29%), Positives = 24/37 (64%)
 Frame = -1

Query: 455 KALQTRKNLKAKMFKRTNSGQPLMKHRLEHILDSIQQ 345
           K  + R+  +  + K+T  GQP+M++++ H+L  ++Q
Sbjct: 106 KKQKDREQTRNMLSKKTKRGQPIMRNQINHLLAKVKQ 142
tr_hit_id B6TGY6
Definition tr|B6TGY6|B6TGY6_MAIZE Putative uncharacterized protein OS=Zea mays
Align length 36
Score (bit) 47.0
E-value 0.0006
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920190|Adiantum capillus-veneris mRNA, clone:
YMU001_000134_B03.
         (524 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6TGY6|B6TGY6_MAIZE Putative uncharacterized protein OS=Zea m...    47   6e-04
tr|A7PTZ0|A7PTZ0_VITVI Chromosome chr7 scaffold_31, whole genome...    47   8e-04
tr|A5AML3|A5AML3_VITVI Putative uncharacterized protein OS=Vitis...    47   8e-04
tr|Q2QP93|Q2QP93_ORYSJ Os12g0538100 protein OS=Oryza sativa subs...    45   0.002
tr|B6TWT6|B6TWT6_MAIZE Putative uncharacterized protein OS=Zea m...    45   0.002
tr|A9RRV9|A9RRV9_PHYPA Predicted protein OS=Physcomitrella paten...    45   0.002
tr|A2ZLA2|A2ZLA2_ORYSI Putative uncharacterized protein OS=Oryza...    45   0.002
tr|Q9ZR13|Q9ZR13_ARATH Putative uncharacterized protein F4C21.10...    45   0.003
tr|A4RU87|A4RU87_OSTLU Predicted protein OS=Ostreococcus lucimar...    39   0.16 
tr|B6K061|B6K061_SCHJP Predicted protein OS=Schizosaccharomyces ...    38   0.35 
tr|A7SBI1|A7SBI1_NEMVE Predicted protein OS=Nematostella vectens...    37   0.78 
tr|B3LT38|B3LT38_YEAS1 Protein FYV7 OS=Saccharomyces cerevisiae ...    36   1.3  
tr|A7A0X3|A7A0X3_YEAS7 Conserved protein OS=Saccharomyces cerevi...    36   1.3  
tr|Q01CU7|Q01CU7_OSTTA Chromosome 03 contig 1, DNA sequence OS=O...    35   2.3  
tr|Q5DF97|Q5DF97_SCHJA SJCHGC05159 protein OS=Schistosoma japoni...    34   5.1  
tr|A4I807|A4I807_LEIIN Putative uncharacterized protein OS=Leish...    33   6.6  
tr|A8IRH6|A8IRH6_CHLRE Predicted protein OS=Chlamydomonas reinha...    33   8.6  
tr|A3DLW4|A3DLW4_STAMF Endonuclease (RecB family)-like protein O...    33   8.6  

>tr|B6TGY6|B6TGY6_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 202

 Score = 47.0 bits (110), Expect = 6e-04
 Identities = 19/36 (52%), Positives = 29/36 (80%)
 Frame = -1

Query: 461 RSKALQTRKNLKAKMFKRTNSGQPLMKHRLEHILDS 354
           R K+   RK L+ KMFK+T SGQP+M++R+EH+L++
Sbjct: 163 REKSEAKRKELREKMFKKTRSGQPVMRYRIEHLLET 198


>tr|A7PTZ0|A7PTZ0_VITVI Chromosome chr7 scaffold_31, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00023590001
           PE=4 SV=1
          Length = 196

 Score = 46.6 bits (109), Expect = 8e-04
 Identities = 20/38 (52%), Positives = 27/38 (71%)
 Frame = -1

Query: 461 RSKALQTRKNLKAKMFKRTNSGQPLMKHRLEHILDSIQ 348
           R +    RK  + KMFKRT  GQP+MK+R+EH+L +IQ
Sbjct: 155 RERVESQRKAAREKMFKRTRKGQPVMKYRIEHLLQTIQ 192


>tr|A5AML3|A5AML3_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_036656 PE=4 SV=1
          Length = 196

 Score = 46.6 bits (109), Expect = 8e-04
 Identities = 20/38 (52%), Positives = 27/38 (71%)
 Frame = -1

Query: 461 RSKALQTRKNLKAKMFKRTNSGQPLMKHRLEHILDSIQ 348
           R +    RK  + KMFKRT  GQP+MK+R+EH+L +IQ
Sbjct: 155 RERVESQRKAAREKMFKRTRKGQPVMKYRIEHLLQTIQ 192


>tr|Q2QP93|Q2QP93_ORYSJ Os12g0538100 protein OS=Oryza sativa subsp.
           japonica GN=Os12g0538100 PE=2 SV=1
          Length = 197

 Score = 45.1 bits (105), Expect = 0.002
 Identities = 17/36 (47%), Positives = 30/36 (83%)
 Frame = -1

Query: 461 RSKALQTRKNLKAKMFKRTNSGQPLMKHRLEHILDS 354
           R ++   R++L+ KMFK+T SGQP+MK+R++H+L++
Sbjct: 155 RERSEARRRDLREKMFKKTRSGQPVMKYRIQHLLET 190


>tr|B6TWT6|B6TWT6_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 202

 Score = 45.1 bits (105), Expect = 0.002
 Identities = 18/36 (50%), Positives = 28/36 (77%)
 Frame = -1

Query: 461 RSKALQTRKNLKAKMFKRTNSGQPLMKHRLEHILDS 354
           R K+   RK L+ KMFK+T  GQP+M++R+EH+L++
Sbjct: 163 REKSEAKRKELREKMFKKTRXGQPVMRYRIEHLLET 198


>tr|A9RRV9|A9RRV9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_160601 PE=4 SV=1
          Length = 228

 Score = 45.1 bits (105), Expect = 0.002
 Identities = 20/39 (51%), Positives = 28/39 (71%)
 Frame = -1

Query: 461 RSKALQTRKNLKAKMFKRTNSGQPLMKHRLEHILDSIQQ 345
           R KA + RK  + K  K T  GQP+M+HR+EH+L+SIQ+
Sbjct: 186 REKAKKERKEAQNKFRKFTGKGQPVMRHRMEHLLESIQR 224


>tr|A2ZLA2|A2ZLA2_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_38602 PE=4 SV=1
          Length = 197

 Score = 45.1 bits (105), Expect = 0.002
 Identities = 17/36 (47%), Positives = 30/36 (83%)
 Frame = -1

Query: 461 RSKALQTRKNLKAKMFKRTNSGQPLMKHRLEHILDS 354
           R ++   R++L+ KMFK+T SGQP+MK+R++H+L++
Sbjct: 155 RERSEARRRDLREKMFKKTRSGQPVMKYRIQHLLET 190


>tr|Q9ZR13|Q9ZR13_ARATH Putative uncharacterized protein F4C21.10
           (Putative uncharacterized protein At4g03180) (At4g03180)
           (Putative uncharacterized protein) OS=Arabidopsis
           thaliana GN=AT4g03180 PE=2 SV=1
          Length = 185

 Score = 44.7 bits (104), Expect = 0.003
 Identities = 18/39 (46%), Positives = 29/39 (74%)
 Frame = -1

Query: 461 RSKALQTRKNLKAKMFKRTNSGQPLMKHRLEHILDSIQQ 345
           + +A   RK  K KM ++T  GQP+MK+R+EH+L+SI++
Sbjct: 139 KEEAESRRKEAKGKMLRKTRHGQPVMKYRIEHLLESIKK 177


>tr|A4RU87|A4RU87_OSTLU Predicted protein OS=Ostreococcus
           lucimarinus (strain CCE9901) GN=OSTLU_30534 PE=4 SV=1
          Length = 201

 Score = 38.9 bits (89), Expect = 0.16
 Identities = 17/34 (50%), Positives = 24/34 (70%)
 Frame = -1

Query: 440 RKNLKAKMFKRTNSGQPLMKHRLEHILDSIQQHQ 339
           R++ K  M K+T  GQP+MKHR++ ILD +Q  Q
Sbjct: 165 RQDKKQLMRKKTKRGQPVMKHRVQSILDKLQAEQ 198


>tr|B6K061|B6K061_SCHJP Predicted protein OS=Schizosaccharomyces
           japonicus yFS275 GN=SJAG_01250 PE=4 SV=1
          Length = 143

 Score = 37.7 bits (86), Expect = 0.35
 Identities = 16/39 (41%), Positives = 28/39 (71%)
 Frame = -1

Query: 455 KALQTRKNLKAKMFKRTNSGQPLMKHRLEHILDSIQQHQ 339
           K  + R+  K K+ +RT SGQP+MK+++ ++LD I++ Q
Sbjct: 103 KKKEDREKQKKKLRERTKSGQPVMKNQMSYLLDKIKRTQ 141