BP920192
Clone id YMU001_000134_B06
Library
Length 410
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000134_B06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTTTTTTTTTTTTTTTGTAGTGAAAGTTATGTATTTGATGTGGGGAAAAAAACCCACAAT
GTTTCGAGTGTCATGTCTTAGATTATGTAGCCCCGACCTTACTGGAAGTGACATGACAAA
CCAAAACCAAATCACCCTGACAAAATGCATGTCATATACGCTAACAGTCCGTGCTCATCA
AAATTCCACACAAGAATACTAAGCTGGATTTCCATTTGCGACATTTGATGCTGAGGCACC
TTTGGGCTGCCCGATCCCCTGTGACACACTGTATTCTTTCCATAGTGGTATCACACTTTC
AAGATACTGCATGAACTTCCACAAACCCACACGCATCTCAACATTACCATACCCATCTGC
CTTCTGCTCTGGATAGCCAATCCCACATCCAAACAAACCAGGCGCAATGA
■■Homology search results ■■ -
sp_hit_id A9ND48
Definition sp|A9ND48|ALR_COXBR Alanine racemase OS=Coxiella burnetii (strain RSA 331 / Henzerling II)
Align length 46
Score (bit) 32.0
E-value 0.97
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920192|Adiantum capillus-veneris mRNA, clone:
YMU001_000134_B06.
(380 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A9ND48|ALR_COXBR Alanine racemase OS=Coxiella burnetii (strai... 32 0.97
sp|Q24UA0|MTNA_DESHY Methylthioribose-1-phosphate isomerase OS=D... 31 1.7
sp|Q83D71|ALR_COXBU Alanine racemase OS=Coxiella burnetii GN=alr... 31 1.7
sp|A9KFM0|ALR_COXBN Alanine racemase OS=Coxiella burnetii (strai... 31 1.7
sp|Q04690|NF1_MOUSE Neurofibromin OS=Mus musculus GN=Nf1 PE=1 SV=1 31 2.2
sp|P21359|NF1_HUMAN Neurofibromin OS=Homo sapiens GN=NF1 PE=1 SV=2 31 2.2
sp|Q8XU95|CAAL_RALSO Carboxylate-amine ligase RSc3298 OS=Ralston... 31 2.2
sp|Q2LXN1|MTNA_SYNAS Methylthioribose-1-phosphate isomerase OS=S... 30 4.8
sp|P05861|NEF_SIVMK Protein Nef OS=Simian immunodeficiency virus... 29 6.3
sp|Q6ZU69|CI14B_HUMAN Transmembrane protein C9orf144B OS=Homo sa... 29 6.3
sp|Q8ZLI9|BIOH_SALTY Carboxylesterase bioH OS=Salmonella typhimu... 29 8.2
sp|Q8Z221|BIOH_SALTI Carboxylesterase bioH OS=Salmonella typhi G... 29 8.2
sp|Q5PLY8|BIOH_SALPA Carboxylesterase bioH OS=Salmonella paratyp... 29 8.2
sp|Q57IW5|BIOH_SALCH Carboxylesterase bioH OS=Salmonella cholera... 29 8.2
sp|A9MMB5|BIOH_SALAR Carboxylesterase bioH OS=Salmonella arizona... 29 8.2

>sp|A9ND48|ALR_COXBR Alanine racemase OS=Coxiella burnetii (strain
RSA 331 / Henzerling II) GN=alr PE=3 SV=1
Length = 364

Score = 32.0 bits (71), Expect = 0.97
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = -2

Query: 364 LAIQSRRQMGMVMLRCVWVCGSSCSILKV*YHYGKNTVCHRGSGSP 227
+AI++RRQ V C W C I V YG H SG+P
Sbjct: 246 IAIKNRRQNDSVGYGCTWSCSEDMPIAIVSIGYGDGYPRHAPSGTP 291


>sp|Q24UA0|MTNA_DESHY Methylthioribose-1-phosphate isomerase
OS=Desulfitobacterium hafniense (strain Y51) GN=mtnA
PE=3 SV=1
Length = 345

Score = 31.2 bits (69), Expect = 1.7
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +1

Query: 82 LTGSDMTNQNQITLTKCMSYTLTVRAHQNSTQEY*AGFPFATFDAEAPLGCPIPCD 249
+ G+D N T K +Y+L V AH + Y A P +T D + P G IP +
Sbjct: 231 IVGADRIAANGDTANKIGTYSLAVLAHAHGIPFYVAA-PTSTIDLKVPSGQDIPIE 285


>sp|Q83D71|ALR_COXBU Alanine racemase OS=Coxiella burnetii GN=alr
PE=3 SV=1
Length = 364

Score = 31.2 bits (69), Expect = 1.7
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = -2

Query: 364 LAIQSRRQMGMVMLRCVWVCGSSCSILKV*YHYGKNTVCHRGSGSP 227
+AI++RRQ V C W C I V YG H SG+P
Sbjct: 246 IAIKNRRQNDSVGYGCTWSCPEDMPIAIVSIGYGDGYPRHAPSGTP 291


>sp|A9KFM0|ALR_COXBN Alanine racemase OS=Coxiella burnetii (strain
Dugway 5J108-111) GN=alr PE=3 SV=1
Length = 364

Score = 31.2 bits (69), Expect = 1.7
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = -2

Query: 364 LAIQSRRQMGMVMLRCVWVCGSSCSILKV*YHYGKNTVCHRGSGSP 227
+AI++RRQ V C W C I V YG H SG+P
Sbjct: 246 IAIKNRRQNDSVGYGCTWSCPEDMPIAIVSIGYGDGYPRHAPSGTP 291


>sp|Q04690|NF1_MOUSE Neurofibromin OS=Mus musculus GN=Nf1 PE=1 SV=1
Length = 2841

Score = 30.8 bits (68), Expect = 2.2
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = -2

Query: 238 SGSPKVPQHQMSQMEIQLSILVWNFDEHGLLAYMTC 131
SG+P + + +++E+ L + +WN D +L M+C
Sbjct: 676 SGTPPICRQAQTKLEVALYMFLWNPDTEAVLVAMSC 711


>sp|P21359|NF1_HUMAN Neurofibromin OS=Homo sapiens GN=NF1 PE=1 SV=2
Length = 2839

Score = 30.8 bits (68), Expect = 2.2
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = -2

Query: 238 SGSPKVPQHQMSQMEIQLSILVWNFDEHGLLAYMTC 131
SG+P + + +++E+ L + +WN D +L M+C
Sbjct: 674 SGTPPICRQAQTKLEVALYMFLWNPDTEAVLVAMSC 709


>sp|Q8XU95|CAAL_RALSO Carboxylate-amine ligase RSc3298 OS=Ralstonia
solanacearum GN=RSc3298 PE=3 SV=1
Length = 377

Score = 30.8 bits (68), Expect = 2.2
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +1

Query: 199 FATFDAEAPLGCPIPCDTLYSFHSGITLSRYCMNF 303
F F LGCP P D LY H+ +SRY +F
Sbjct: 130 FTVFGQHVHLGCPSPDDALYLLHA---MSRYVPHF 161


>sp|Q2LXN1|MTNA_SYNAS Methylthioribose-1-phosphate isomerase
OS=Syntrophus aciditrophicus (strain SB) GN=mtnA PE=3
SV=1
Length = 367

Score = 29.6 bits (65), Expect = 4.8
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = +1

Query: 49 RVSCLRLCSPDLTGSDMTNQNQITLTKCMSYTLTVRAHQNSTQEY*AGFPFATFDAEAPL 228
R+ C+ L G+D N T K +YTL V A +S Y A P +T D +
Sbjct: 247 RIDCI------LVGADRIATNGDTANKIGTYTLAVLAAAHSVPLYVAA-PLSTIDRKLSS 299

Query: 229 GCPIPCD 249
G IP +
Sbjct: 300 GNEIPIE 306


>sp|P05861|NEF_SIVMK Protein Nef OS=Simian immunodeficiency virus
(isolate K6W) GN=nef PE=3 SV=3
Length = 207

Score = 29.3 bits (64), Expect = 6.3
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1

Query: 290 YLESVIPLWKEYSVSQGIGQPK 225
YLE +IP W++Y+ GI PK
Sbjct: 145 YLEGIIPDWQDYTSGPGIRYPK 166


>sp|Q6ZU69|CI14B_HUMAN Transmembrane protein C9orf144B OS=Homo
sapiens GN=C9orf144B PE=2 SV=4
Length = 1335

Score = 29.3 bits (64), Expect = 6.3
Identities = 17/74 (22%), Positives = 33/74 (44%)
Frame = +2

Query: 101 QTKTKSP*QNACHIR*QSVLIKIPHKNTKLDFHLRHLMLRHLWAARSPVTHCILSIVVSH 280
+T T S + + + +L H L+FH++ ++RH W + I ++ S
Sbjct: 563 ETTTASQTGKSISVLTRELLFFPEHARKLLEFHIQKQLIRHRWGLPQKIQQSIQLLLTST 622

Query: 281 FQDTA*TSTNPHAS 322
Q T +S+ A+
Sbjct: 623 DQQTVSSSSTALAN 636


tr_hit_id Q5WSN3
Definition tr|Q5WSN3|Q5WSN3_LEGPL Putative uncharacterized protein OS=Legionella pneumophila (strain Lens)
Align length 42
Score (bit) 58.2
E-value 2.0e-07
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920192|Adiantum capillus-veneris mRNA, clone:
YMU001_000134_B06.
(380 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q5WSN3|Q5WSN3_LEGPL Putative uncharacterized protein OS=Legio... 58 2e-07
tr|Q5ZRG5|Q5ZRG5_LEGPH Putative uncharacterized protein OS=Legio... 58 3e-07
tr|A5IIB2|A5IIB2_LEGPC Putative uncharacterized protein OS=Legio... 58 3e-07
tr|Q86L27|Q86L27_DICDI Putative uncharacterized protein OS=Dicty... 58 3e-07
tr|Q83C61|Q83C61_COXBU Putative uncharacterized protein OS=Coxie... 55 2e-06
tr|B6J7S6|B6J7S6_COXB1 Putative uncharacterized protein OS=Coxie... 55 2e-06
tr|B6IZL1|B6IZL1_COXB2 Putative uncharacterized protein OS=Coxie... 55 2e-06
tr|A9NDY0|A9NDY0_COXBR Pyridine nucleotide-disulphide oxidoreduc... 55 2e-06
tr|A9KFW7|A9KFW7_COXBN Putative uncharacterized protein OS=Coxie... 55 2e-06
tr|A0QDE0|A0QDE0_MYCA1 Putative uncharacterized protein OS=Mycob... 55 2e-06
tr|A9ZIH3|A9ZIH3_COXBU Pyridine nucleotide-disulphide oxidoreduc... 55 2e-06
tr|A9SLM8|A9SLM8_PHYPA Predicted protein OS=Physcomitrella paten... 54 3e-06
tr|B2HMD5|B2HMD5_MYCMM Conserved hypothetical membrane protein O... 54 4e-06
tr|A0PTZ3|A0PTZ3_MYCUA Conserved hypothetical membrane protein O... 54 4e-06
tr|B6HHI3|B6HHI3_PENCH Pc21g05370 protein OS=Penicillium chrysog... 54 5e-06
tr|Q2TYY1|Q2TYY1_ASPOR Predicted protein OS=Aspergillus oryzae G... 52 1e-05
tr|B8NYJ6|B8NYJ6_ASPFL Putative uncharacterized protein OS=Asper... 52 1e-05
tr|B2SF47|B2SF47_FRATM Putative uncharacterized protein OS=Franc... 52 2e-05
tr|A4IYT6|A4IYT6_FRATW Putative uncharacterized protein OS=Franc... 52 2e-05
tr|A0Q4Y1|A0Q4Y1_FRATN Putative uncharacterized protein OS=Franc... 52 2e-05
tr|B4ASK3|B4ASK3_FRANO Putative uncharacterized protein OS=Franc... 52 2e-05
tr|A7JKG5|A7JKG5_FRANO Putative uncharacterized protein OS=Franc... 52 2e-05
tr|A7JGA1|A7JGA1_FRANO Putative uncharacterized protein OS=Franc... 52 2e-05
tr|A7EAY8|A7EAY8_SCLS1 Putative uncharacterized protein OS=Scler... 51 2e-05
tr|A6RXF1|A6RXF1_BOTFB Putative uncharacterized protein OS=Botry... 51 2e-05
tr|B0U034|B0U034_FRAP2 Putative uncharacterized protein OS=Franc... 51 3e-05
tr|A7YSL6|A7YSL6_FRATU Putative uncharacterized protein OS=Franc... 50 4e-05
tr|A4KPW7|A4KPW7_FRATU Putative uncharacterized protein OS=Franc... 50 4e-05
tr|Q0D1Y3|Q0D1Y3_ASPTN Putative uncharacterized protein OS=Asper... 50 7e-05
tr|Q5BDD0|Q5BDD0_EMENI Putative uncharacterized protein OS=Emeri... 49 9e-05

>tr|Q5WSN3|Q5WSN3_LEGPL Putative uncharacterized protein
OS=Legionella pneumophila (strain Lens) GN=lpl2845 PE=4
SV=1
Length = 348

Score = 58.2 bits (139), Expect = 2e-07
Identities = 25/42 (59%), Positives = 30/42 (71%)
Frame = -1

Query: 380 LFGCGIGYPEQKADGYGNVEMRVGLWKFMQYLESVIPLWKEY 255
LFG GI YPE D +G VE +VGLWKFM YL V+P+W +Y
Sbjct: 305 LFGLGIAYPELNVDPFGTVEHQVGLWKFMVYLCKVLPVWFKY 346


>tr|Q5ZRG5|Q5ZRG5_LEGPH Putative uncharacterized protein
OS=Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 / ATCC 33152 / DSM 7513) GN=lpg2917 PE=4
SV=1
Length = 348

Score = 57.8 bits (138), Expect = 3e-07
Identities = 24/42 (57%), Positives = 30/42 (71%)
Frame = -1

Query: 380 LFGCGIGYPEQKADGYGNVEMRVGLWKFMQYLESVIPLWKEY 255
LFG GI YPE D +G +E +VGLWKFM YL V+P+W +Y
Sbjct: 305 LFGLGIAYPELSVDPFGTIEHQVGLWKFMVYLCKVLPVWFKY 346


>tr|A5IIB2|A5IIB2_LEGPC Putative uncharacterized protein
OS=Legionella pneumophila (strain Corby) GN=LPC_3225
PE=4 SV=1
Length = 348

Score = 57.8 bits (138), Expect = 3e-07
Identities = 24/42 (57%), Positives = 30/42 (71%)
Frame = -1

Query: 380 LFGCGIGYPEQKADGYGNVEMRVGLWKFMQYLESVIPLWKEY 255
LFG GI YPE D +G +E +VGLWKFM YL V+P+W +Y
Sbjct: 305 LFGLGIAYPELSVDPFGTIEHQVGLWKFMVYLCKVLPVWFKY 346


>tr|Q86L27|Q86L27_DICDI Putative uncharacterized protein
OS=Dictyostelium discoideum GN=DDB_0168996 PE=4 SV=1
Length = 387

Score = 57.8 bits (138), Expect = 3e-07
Identities = 24/39 (61%), Positives = 29/39 (74%)
Frame = -1

Query: 380 LFGCGIGYPEQKADGYGNVEMRVGLWKFMQYLESVIPLW 264
LFG GI +P+ K D GN+E VGLWKFM YL+ V+PLW
Sbjct: 343 LFGIGIAFPQFKPDRVGNLEYNVGLWKFMVYLDQVLPLW 381


>tr|Q83C61|Q83C61_COXBU Putative uncharacterized protein OS=Coxiella
burnetii GN=CBU_1268 PE=4 SV=2
Length = 357

Score = 54.7 bits (130), Expect = 2e-06
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = -1

Query: 380 LFGCGIGYPEQKADGYGNVEMRVGLWKFMQYLESVIPLWKEYSV 249
LFG GIG+P Q G EM VGLWKFM + V+P+W++Y +
Sbjct: 314 LFGTGIGFPRQVTTPLGATEMNVGLWKFMHDIRKVMPIWQQYGL 357


>tr|B6J7S6|B6J7S6_COXB1 Putative uncharacterized protein OS=Coxiella
burnetii (strain CbuK_Q154) GN=CbuK_1130 PE=4 SV=1
Length = 357

Score = 54.7 bits (130), Expect = 2e-06
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = -1

Query: 380 LFGCGIGYPEQKADGYGNVEMRVGLWKFMQYLESVIPLWKEYSV 249
LFG GIG+P Q G EM VGLWKFM + V+P+W++Y +
Sbjct: 314 LFGMGIGFPRQVTTPLGATEMNVGLWKFMHDIRKVMPIWQQYGL 357


>tr|B6IZL1|B6IZL1_COXB2 Putative uncharacterized protein OS=Coxiella
burnetii (strain CbuG_Q212) GN=CbuG_0742 PE=4 SV=1
Length = 357

Score = 54.7 bits (130), Expect = 2e-06
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = -1

Query: 380 LFGCGIGYPEQKADGYGNVEMRVGLWKFMQYLESVIPLWKEYSV 249
LFG GIG+P Q G EM VGLWKFM + V+P+W++Y +
Sbjct: 314 LFGTGIGFPRQVTTPLGATEMNVGLWKFMHDIRKVMPIWQQYGL 357


>tr|A9NDY0|A9NDY0_COXBR Pyridine nucleotide-disulphide
oxidoreductase OS=Coxiella burnetii (strain RSA 331 /
Henzerling II) GN=COXBURSA331_A1416 PE=4 SV=1
Length = 353

Score = 54.7 bits (130), Expect = 2e-06
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = -1

Query: 380 LFGCGIGYPEQKADGYGNVEMRVGLWKFMQYLESVIPLWKEYSV 249
LFG GIG+P Q G EM VGLWKFM + V+P+W++Y +
Sbjct: 310 LFGTGIGFPRQVTTPLGATEMNVGLWKFMHDIRKVMPIWQQYGL 353


>tr|A9KFW7|A9KFW7_COXBN Putative uncharacterized protein OS=Coxiella
burnetii (strain Dugway 5J108-111) GN=CBUD_1353 PE=4
SV=2
Length = 357

Score = 54.7 bits (130), Expect = 2e-06
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = -1

Query: 380 LFGCGIGYPEQKADGYGNVEMRVGLWKFMQYLESVIPLWKEYSV 249
LFG GIG+P Q G EM VGLWKFM + V+P+W++Y +
Sbjct: 314 LFGTGIGFPRQVTTPLGATEMNVGLWKFMHDIRKVMPIWQQYGL 357


>tr|A0QDE0|A0QDE0_MYCA1 Putative uncharacterized protein
OS=Mycobacterium avium (strain 104) GN=MAV_1699 PE=4
SV=1
Length = 336

Score = 54.7 bits (130), Expect = 2e-06
Identities = 24/42 (57%), Positives = 29/42 (69%)
Frame = -1

Query: 380 LFGCGIGYPEQKADGYGNVEMRVGLWKFMQYLESVIPLWKEY 255
LFG GI +P+ D YG + RVGL KFM YL+SV+PLW Y
Sbjct: 293 LFGVGIAFPQYAEDPYGYGQFRVGLKKFMDYLDSVLPLWLRY 334