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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920195
Clone id YMU001_000134_B09
Library
Length 418
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000134_B09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GTGTGTGTGTGAGAGCAACACCATCACAAGCTCGCGCTCTCTCTCTATTCTTTGGCTGCA
TCACCCGGCATTGACCTGCTCCATGCCTCGCCCTTCAAATACCGCTATTTCCACTCTCTC
ACTTTGAGCCAGACTTTCCCAATTGCTCGATTATTTGCAGATGCTATGCTTACCTGCACA
CTATGTGTGCCTTCAATGTTCTGCTCGGTATAGCAGTTGTGATTCCTTTCAAGCTTGCCA
ATTTGCTAGTTATGGCTACCCAAATTTCCTGCAAGTTCCAAGAAGTGTGTAATCACCAAT
GCCCGACCCAAGGTCTTCTCAATAGCTTACAATGCCCTCAGATTGTGCTTGGCCGATTCC
TAATGGTTGCCTAATTTTCTGTCTTGAAAATTGTGAGATGCCTCCTCCCTGTGTTGTT
■■Homology search results ■■ -
sp_hit_id P46580
Definition sp|P46580|ANM5_CAEEL Protein arginine N-methyltransferase 5 OS=Caenorhabditis elegans
Align length 85
Score (bit) 31.2
E-value 1.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920195|Adiantum capillus-veneris mRNA, clone:
YMU001_000134_B09.
         (418 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P46580|ANM5_CAEEL Protein arginine N-methyltransferase 5 OS=C...    31   1.7  
sp|Q6KAS7|ZN521_MOUSE Zinc finger protein 521 OS=Mus musculus GN...    31   2.2  
sp|Q96K83|ZN521_HUMAN Zinc finger protein 521 OS=Homo sapiens GN...    31   2.2  
sp|Q6NUD7|ZN521_XENLA Zinc finger protein 521 OS=Xenopus laevis ...    30   2.9  
sp|Q5T749|KPRP_HUMAN Keratinocyte proline-rich protein OS=Homo s...    30   2.9  
sp|P15620|ZN271_MOUSE Zinc finger protein 271 OS=Mus musculus GN...    30   3.8  
sp|A2BUQ2|TGT_PROM5 Queuine tRNA-ribosyltransferase OS=Prochloro...    30   3.8  
sp|A8G2T1|TGT_PROM2 Queuine tRNA-ribosyltransferase OS=Prochloro...    30   4.9  
sp|Q5T2D2|TRML2_HUMAN Trem-like transcript 2 protein OS=Homo sap...    29   6.4  
sp|A3PAZ2|TGT_PROM0 Queuine tRNA-ribosyltransferase OS=Prochloro...    29   6.4  
sp|A2BP70|TGT_PROMS Queuine tRNA-ribosyltransferase OS=Prochloro...    29   8.4  
sp|Q8JZR0|ACSL5_MOUSE Long-chain-fatty-acid--CoA ligase 5 OS=Mus...    29   8.4  

>sp|P46580|ANM5_CAEEL Protein arginine N-methyltransferase 5
           OS=Caenorhabditis elegans GN=prmt-5 PE=2 SV=2
          Length = 734

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
 Frame = -3

Query: 308 GRALVITHFLELAGNLGSHN*QIGKLERNHNCYTEQNIEGTHSVQVSIASANNRAIGKV- 132
           GR  V+ + L   G  G    +I K ER +N    Q  E    V++ I   N  AI  + 
Sbjct: 404 GRKTVVIYLL--GGGRGPIGTKILKSEREYNNTFRQGQESL-KVKLYIVEKNPNAIVTLK 460

Query: 131 WLKVREWK*RYLKGEAWSRSMPGDA 57
           ++ VR WK R    E+  RS+PG A
Sbjct: 461 YMNVRTWKRRVTIIESDMRSLPGIA 485


>sp|Q6KAS7|ZN521_MOUSE Zinc finger protein 521 OS=Mus musculus
           GN=Znf521 PE=2 SV=2
          Length = 1311

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +2

Query: 182 YVCLQCSARYSSCDSFQ 232
           Y+C QC A+Y+S DSFQ
Sbjct: 634 YICNQCGAKYTSLDSFQ 650


>sp|Q96K83|ZN521_HUMAN Zinc finger protein 521 OS=Homo sapiens
           GN=ZNF521 PE=1 SV=1
          Length = 1311

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +2

Query: 182 YVCLQCSARYSSCDSFQ 232
           Y+C QC A+Y+S DSFQ
Sbjct: 634 YICNQCGAKYTSLDSFQ 650


>sp|Q6NUD7|ZN521_XENLA Zinc finger protein 521 OS=Xenopus laevis
           GN=znf521 PE=2 SV=1
          Length = 1310

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 170 LPAHYVCLQCSARYSSCDSFQ 232
           L   Y+C QC A+Y+S D FQ
Sbjct: 629 LAGEYICNQCGAKYTSLDGFQ 649


>sp|Q5T749|KPRP_HUMAN Keratinocyte proline-rich protein OS=Homo
           sapiens GN=KPRP PE=1 SV=1
          Length = 579

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 19/52 (36%), Positives = 21/52 (40%)
 Frame = +2

Query: 257 YPNFLQVPRSV*SPMPDPRSSQ*LTMPSDCAWPIPNGCLIFCLENCEMPPPC 412
           YP  L   R    P+P PR       P  C  P P  CL    + CE P PC
Sbjct: 433 YPEPLPALRPTPRPVPLPR-------PGQCEIPEPRPCL----QPCEHPEPC 473


>sp|P15620|ZN271_MOUSE Zinc finger protein 271 OS=Mus musculus
           GN=Znf271 PE=2 SV=1
          Length = 580

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 19/57 (33%), Positives = 27/57 (47%)
 Frame = +2

Query: 44  SILWLHHPALTCSMPRPSNTAISTLSL*ARLSQLLDYLQMLCLPAHYVCLQCSARYS 214
           S+L LH    T   P P N    + S   RLS L+++ ++      Y C QCS  +S
Sbjct: 313 SVLILHQRIHTGEKPYPCNQCTKSFS---RLSDLINHQRIHTGEKPYPCSQCSKMFS 366


>sp|A2BUQ2|TGT_PROM5 Queuine tRNA-ribosyltransferase
           OS=Prochlorococcus marinus (strain MIT 9515) GN=tgt PE=3
           SV=1
          Length = 372

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
 Frame = +3

Query: 117 SHFEPDFPNCSIICRCY-------AYLHTMCAFNVLLGIAVVIPFKLANLLVMATQISCK 275
           + F+ DF      C+C        AYLH +   + +LG+ ++    +A+LL     IS  
Sbjct: 290 ARFKNDFSPIDKTCKCETCKSYSRAYLHHLVRNDEILGLTLISLHNIAHLLRFTNAISAA 349

Query: 276 FQEVC 290
            ++ C
Sbjct: 350 IKDNC 354


>sp|A8G2T1|TGT_PROM2 Queuine tRNA-ribosyltransferase
           OS=Prochlorococcus marinus (strain MIT 9215) GN=tgt PE=3
           SV=1
          Length = 372

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
 Frame = +3

Query: 117 SHFEPDFPNCSIICRCY-------AYLHTMCAFNVLLGIAVVIPFKLANLLVMATQISCK 275
           + F+ DF      C+C        AYLH +   + +LG+ ++    +A+LL     IS  
Sbjct: 290 ARFKNDFSPIDKTCKCETCKSYSRAYLHHLIRNDEILGLTLISLHNIAHLLRFTNAISTA 349

Query: 276 FQEVC 290
            ++ C
Sbjct: 350 IKDNC 354


>sp|Q5T2D2|TRML2_HUMAN Trem-like transcript 2 protein OS=Homo
           sapiens GN=TREML2 PE=2 SV=2
          Length = 321

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -3

Query: 197 IEG-THSVQVSIASANNRAIGKVWLKVREWK 108
           +EG T SVQ S     NR  GKVW K+R+ K
Sbjct: 32  LEGETLSVQCSYKGYKNRVEGKVWCKIRKKK 62


>sp|A3PAZ2|TGT_PROM0 Queuine tRNA-ribosyltransferase
           OS=Prochlorococcus marinus (strain MIT 9301) GN=tgt PE=3
           SV=1
          Length = 372

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
 Frame = +3

Query: 117 SHFEPDFPNCSIICRCY-------AYLHTMCAFNVLLGIAVVIPFKLANLLVMATQISCK 275
           + F+ DF      C+C        AYLH +   + +LG++++    +A+L+     IS  
Sbjct: 290 ARFKNDFSPIDKTCKCETCKSYSRAYLHHLIRNDEILGLSLISLHNIAHLIRFTNAISTA 349

Query: 276 FQEVC 290
            ++ C
Sbjct: 350 IRDNC 354
tr_hit_id Q22RJ4
Definition tr|Q22RJ4|Q22RJ4_TETTH Putative uncharacterized protein OS=Tetrahymena thermophila SB210
Align length 65
Score (bit) 35.4
E-value 1.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920195|Adiantum capillus-veneris mRNA, clone:
YMU001_000134_B09.
         (418 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q22RJ4|Q22RJ4_TETTH Putative uncharacterized protein OS=Tetra...    35   1.4  
tr|Q23RP1|Q23RP1_TETTH Leishmanolysin family protein OS=Tetrahym...    33   7.0  
tr|Q22D11|Q22D11_TETTH Putative uncharacterized protein OS=Tetra...    30   8.4  

>tr|Q22RJ4|Q22RJ4_TETTH Putative uncharacterized protein
            OS=Tetrahymena thermophila SB210 GN=TTHERM_00014940 PE=4
            SV=1
          Length = 1862

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 19/65 (29%), Positives = 30/65 (46%)
 Frame = +2

Query: 71   LTCSMPRPSNTAISTLSL*ARLSQLLDYLQMLCLPAHYVCLQCSARYSSCDSFQACQFAS 250
            L C++PR    A +T     + +Q LD     C P H+ C  CS    + +  Q+C  + 
Sbjct: 1342 LKCALPRYFQQATNTCEENCQQNQFLDNTDATCEPCHFSCSSCSG--PTNNQCQSCSGSM 1399

Query: 251  YGYPN 265
            + Y N
Sbjct: 1400 FLYQN 1404


>tr|Q23RP1|Q23RP1_TETTH Leishmanolysin family protein OS=Tetrahymena
            thermophila SB210 GN=TTHERM_01102690 PE=4 SV=1
          Length = 1479

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 20/84 (23%), Positives = 34/84 (40%)
 Frame = +2

Query: 8    CESNTITSSRSLSILWLHHPALTCSMPRPSNTAISTLSL*ARLSQLLDYLQMLCLPAHYV 187
            C  +   SS  L  +      LTCS P+ SN  ++  +    ++   +  +     +   
Sbjct: 962  CFEDYQISSNGLCTMICDQSCLTCSRPKDSNACLTCKAPSILVNNFCEQCKDGFFYSQGE 1021

Query: 188  CLQCSARYSSCDSFQACQFASYGY 259
            C +CS    SC++ Q C     GY
Sbjct: 1022 CKKCSKNCKSCENEQQCSKCEDGY 1045


>tr|Q22D11|Q22D11_TETTH Putative uncharacterized protein
            OS=Tetrahymena thermophila SB210 GN=TTHERM_01006490 PE=4
            SV=2
          Length = 1669

 Score = 30.0 bits (66), Expect(2) = 8.4
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +2

Query: 167  CLPAHYVCLQCSA-RYSSCDSFQACQFASYGYPNFLQ 274
            CLP H  C +CS   Y+ C +   CQ  +Y + N  Q
Sbjct: 1119 CLPCHSSCAECSGPNYNQCTT---CQDKTYKFQNICQ 1152



 Score = 21.6 bits (44), Expect(2) = 8.4
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 273  KFQEVCNHQCP 305
            KFQ +C  +CP
Sbjct: 1146 KFQNICQTECP 1156