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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920198
Clone id YMU001_000134_B12
Library
Length 399
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000134_B12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTTTTTTTTTTTTGGTTGGAAAGAAATTTGCATAAAGGGAAGAATAGTGTACAACCACAT
AGATAGAGGCAAGATATGTGTATTACAAAGGGTGTATCTTTGATAGTATACAGGTTCAAT
AGCCTCCAAAAAATATAACAACGGGCACTACTACGAGGATGATAACAGCCAAGCTAGCCA
ACAAGGCACCTCCTTTGAAAGACTCCTTCACTCCTCCTGCCCCATTCACATGTTGGTACA
CTAGGTATGCTGCCACACATGCACTCACCACTAGCGCGGCCGTTGTCCTTCTGATGTCCA
AAACTTGAAGAGGTGCGGTGATCAATAGCAACACAAGCACAAGCGGTAGCTCTAGCTCCC
CTGGAAGTTGGTAAAACAACCTAACCAATAGAGCTAGAA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920198|Adiantum capillus-veneris mRNA, clone:
YMU001_000134_B12.
         (386 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done

 ***** No hits found ******
tr_hit_id B8LQ60
Definition tr|B8LQ60|B8LQ60_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 70
Score (bit) 46.2
E-value 0.0008
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920198|Adiantum capillus-veneris mRNA, clone:
YMU001_000134_B12.
         (386 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8LQ60|B8LQ60_PICSI Putative uncharacterized protein OS=Picea...    46   8e-04
tr|Q84LB5|Q84LB5_CRYJA Cold acclimation protein COR413-TM1 OS=Cr...    40   0.076
tr|B6T8R2|B6T8R2_MAIZE Cold acclimation WCOR413-like protein gam...    39   0.100
tr|Q84XU9|Q84XU9_WHEAT Cold acclimation protein COR413-TM1 OS=Tr...    37   0.50 
tr|Q8W0V1|Q8W0V1_HORVD Cold acclimation WCOR413-like protein gam...    36   1.1  
tr|Q688W8|Q688W8_ORYSJ Os05g0566800 protein OS=Oryza sativa subs...    35   1.9  
tr|B8AWS3|B8AWS3_ORYSI Putative uncharacterized protein OS=Oryza...    35   1.9  
tr|Q9XHF0|Q9XHF0_MAIZE Putative uncharacterized protein (Fragmen...    35   2.5  
tr|B4U4Z5|B4U4Z5_STREM Putative uncharacterized protein OS=Strep...    34   4.2  
tr|Q84XU8|Q84XU8_ORYSJ Cold acclimation protein COR413-TM1 OS=Or...    34   4.2  
tr|A9S0S4|A9S0S4_PHYPA Predicted protein OS=Physcomitrella paten...    33   7.2  
tr|B6NIH0|B6NIH0_BRAFL Putative uncharacterized protein OS=Branc...    33   7.2  
tr|B3XZY9|B3XZY9_LAMJA Coagulation factor VII OS=Lampetra japoni...    33   9.3  
tr|Q93WS4|Q93WS4_PHYPA Cold acclimation protein WCOR413-like pro...    33   9.3  
tr|A9S4D3|A9S4D3_PHYPA Predicted protein OS=Physcomitrella paten...    33   9.3  

>tr|B8LQ60|B8LQ60_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 245

 Score = 46.2 bits (108), Expect = 8e-04
 Identities = 24/70 (34%), Positives = 33/70 (47%)
 Frame = -3

Query: 384 LALLVRLFYQXXXXXXXXXXXXXXXXXXXXXXLDIRRTTAALVVSACVAAYLVYQHVNGA 205
           L  LVRLFY                        ++R T A +V+S   +AYL+YQHV   
Sbjct: 151 LVFLVRLFYYIPGELELPFLFVLLVVIAPYQATNLRGTQAGMVISMAASAYLIYQHVTKT 210

Query: 204 GGVKESFKGG 175
           GG+K++F  G
Sbjct: 211 GGIKKAFDQG 220


>tr|Q84LB5|Q84LB5_CRYJA Cold acclimation protein COR413-TM1
           OS=Cryptomeria japonica PE=2 SV=1
          Length = 241

 Score = 39.7 bits (91), Expect = 0.076
 Identities = 20/65 (30%), Positives = 31/65 (47%)
 Frame = -3

Query: 375 LVRLFYQXXXXXXXXXXXXXXXXXXXXXXLDIRRTTAALVVSACVAAYLVYQHVNGAGGV 196
           L+RLFY                         +R T A++V+S  ++AYL +QH   AG V
Sbjct: 150 LIRLFYPIPGEMELPLLFVLLVIIAPSQASSMRGTQASMVISTAISAYLSFQHFTNAGSV 209

Query: 195 KESFK 181
           K++F+
Sbjct: 210 KKAFE 214


>tr|B6T8R2|B6T8R2_MAIZE Cold acclimation WCOR413-like protein gamma
           form OS=Zea mays PE=2 SV=1
          Length = 226

 Score = 39.3 bits (90), Expect = 0.100
 Identities = 23/70 (32%), Positives = 32/70 (45%)
 Frame = -3

Query: 384 LALLVRLFYQXXXXXXXXXXXXXXXXXXXXXXLDIRRTTAALVVSACVAAYLVYQHVNGA 205
           LALLVRLF+                       +D+R T    V+S  +AAYL +QH    
Sbjct: 137 LALLVRLFFFIPGELELPLSTMLLVSVAPYQFMDLRGTQGGAVLSLAIAAYLAFQHFTRV 196

Query: 204 GGVKESFKGG 175
           GG  ++F+ G
Sbjct: 197 GGPGKAFEQG 206


>tr|Q84XU9|Q84XU9_WHEAT Cold acclimation protein COR413-TM1
           OS=Triticum aestivum PE=2 SV=1
          Length = 221

 Score = 37.0 bits (84), Expect = 0.50
 Identities = 21/70 (30%), Positives = 31/70 (44%)
 Frame = -3

Query: 384 LALLVRLFYQXXXXXXXXXXXXXXXXXXXXXXLDIRRTTAALVVSACVAAYLVYQHVNGA 205
           LAL+VRLF                        +++R T    +VS  +AAYL +QH    
Sbjct: 132 LALVVRLFLPFPGELELPLSTMLAVSVAPYQVMNVRGTQGGAIVSLALAAYLAFQHFTRT 191

Query: 204 GGVKESFKGG 175
           GG+ ++F  G
Sbjct: 192 GGIGKAFDQG 201


>tr|Q8W0V1|Q8W0V1_HORVD Cold acclimation WCOR413-like protein gamma
           form OS=Hordeum vulgare var. distichum PE=2 SV=1
          Length = 215

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 21/70 (30%), Positives = 30/70 (42%)
 Frame = -3

Query: 384 LALLVRLFYQXXXXXXXXXXXXXXXXXXXXXXLDIRRTTAALVVSACVAAYLVYQHVNGA 205
           LAL VRLF                        +++R T    +VS  +AAYL +QH    
Sbjct: 126 LALAVRLFLPFPGELELPLSTMLAVSVAPYQVMNVRGTQGGTIVSLVLAAYLAFQHFTRT 185

Query: 204 GGVKESFKGG 175
           GG+ ++F  G
Sbjct: 186 GGIGKAFDQG 195


>tr|Q688W8|Q688W8_ORYSJ Os05g0566800 protein OS=Oryza sativa subsp.
           japonica GN=OJ1781_H11.9 PE=2 SV=1
          Length = 222

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 20/70 (28%), Positives = 30/70 (42%)
 Frame = -3

Query: 384 LALLVRLFYQXXXXXXXXXXXXXXXXXXXXXXLDIRRTTAALVVSACVAAYLVYQHVNGA 205
           LALLVRLF+                       +++R T     +S  +A YL +QH    
Sbjct: 133 LALLVRLFFSIPGELELPLSTMLLVSVAPYQLMNLRGTQGGAALSLALAGYLAFQHFTRV 192

Query: 204 GGVKESFKGG 175
           GG+ ++F  G
Sbjct: 193 GGLGKAFDQG 202


>tr|B8AWS3|B8AWS3_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_21013 PE=4 SV=1
          Length = 222

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 20/70 (28%), Positives = 30/70 (42%)
 Frame = -3

Query: 384 LALLVRLFYQXXXXXXXXXXXXXXXXXXXXXXLDIRRTTAALVVSACVAAYLVYQHVNGA 205
           LALLVRLF+                       +++R T     +S  +A YL +QH    
Sbjct: 133 LALLVRLFFSIPGELELPLSTMLLVSVAPYQLMNLRGTQGGAALSLALAGYLAFQHFTRV 192

Query: 204 GGVKESFKGG 175
           GG+ ++F  G
Sbjct: 193 GGLGKAFDQG 202


>tr|Q9XHF0|Q9XHF0_MAIZE Putative uncharacterized protein (Fragment)
           OS=Zea mays PE=2 SV=1
          Length = 69

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = -3

Query: 285 DIRRTTAALVVSACVAAYLVYQHVNGAGGVKESFKGG 175
           D+R T    V+S  +AAYL +QH    GG  ++F+ G
Sbjct: 13  DLRGTQGGAVLSLAIAAYLAFQHFTRVGGPGKAFEQG 49


>tr|B4U4Z5|B4U4Z5_STREM Putative uncharacterized protein
           OS=Streptococcus equi subsp. zooepidemicus (strain
           MGCS10565) GN=Sez_0051 PE=4 SV=1
          Length = 99

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +1

Query: 94  YTGSIASKKYNNGHYYEDDNSQASQQGTSFE 186
           Y  ++  K YNNG+ Y D+N+  + + TSFE
Sbjct: 43  YASAVVIKDYNNGYRYFDENNGQTMRATSFE 73


>tr|Q84XU8|Q84XU8_ORYSJ Cold acclimation protein COR413-TM1 OS=Oryza
           sativa subsp. japonica PE=2 SV=1
          Length = 222

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 20/70 (28%), Positives = 30/70 (42%)
 Frame = -3

Query: 384 LALLVRLFYQXXXXXXXXXXXXXXXXXXXXXXLDIRRTTAALVVSACVAAYLVYQHVNGA 205
           LALLVRLF+                       +++R T     +S  +A YL +QH    
Sbjct: 133 LALLVRLFFCIPGELELPLSTMLLVSVAPYQLMNLRGTQGGAALSLALAGYLAFQHFTRV 192

Query: 204 GGVKESFKGG 175
           GG+ ++F  G
Sbjct: 193 GGLGKAFDQG 202