BP920199 |
Clone id |
YMU001_000134_C01 |
Library |
YMU01 |
Length |
572 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000134_C01. |
Accession |
BP920199 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1850Contig1 |
Sequence |
CACTGGATGGCTGCGACCACCATTCGGATGATATTGCCCACGTCCCCTGCCTCGAACTCG TCCTCTGCCTCGTCCCTTCTTTGAAGATCCATCAAGCTGAGCGTTATCACCTCCTGGAAG CTCCTCAGATCTATCTTGGATATTTCCCTCCTCACCACCTCTATCCACAACATTGTCACT TGCTGAAGTAGCAGCATCATCTTCAGGACCACTACCATCAGCTCCCTCATTGACTTTGTG AGATTTAGAGGCGTTGTGCTTGTTCGTTCTCCTCAGCAGTAACCGCACATGAAGACCACG TCGCCAGTTACCTTGATCAGTAAGCTCCGCAACAGCTCGTTCAGCTTGCTCTACAGTTTC ATATTCAACAAGGGCATGAAGCTTGTTGCTGACAACCATGTCAGCCTTTGAAAACTTGGC TGCTTGATTAGTGCCATTACTTGCCTCTGGCTCACACACACGAATCATCTTGACATTGCC AACACTGCTGAAAAGCTGCTCCATGGACTCAATTGAGTGATCGTCAGGCAGATTTTCTGC CACAACTGTCCGTGACTGAATCTCCTCCAGGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7ZWE3 |
Definition |
sp|Q7ZWE3|LARP7_DANRE La-related protein 7 OS=Danio rerio |
Align length |
84 |
Score (bit) |
34.7 |
E-value |
0.35 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q53M44 |
Definition |
tr|Q53M44|Q53M44_ORYSJ At2g43970/F6E13.10 OS=Oryza sativa subsp. japonica |
Align length |
193 |
Score (bit) |
124.0 |
E-value |
3.0e-27 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920199|Adiantum capillus-veneris mRNA, clone: YMU001_000134_C01. (572 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q53M44|Q53M44_ORYSJ At2g43970/F6E13.10 OS=Oryza sativa subsp.... 124 3e-27 tr|Q53JK0|Q53JK0_ORYSJ La domain-containing protein, putative, e... 124 3e-27 tr|Q0ITJ6|Q0ITJ6_ORYSJ Os11g0248200 protein (Fragment) OS=Oryza ... 124 3e-27 tr|B8BJX1|B8BJX1_ORYSI Putative uncharacterized protein OS=Oryza... 124 3e-27 tr|A7QB10|A7QB10_VITVI Chromosome chr5 scaffold_72, whole genome... 124 3e-27 tr|A3CA75|A3CA75_ORYSJ Putative uncharacterized protein OS=Oryza... 124 3e-27 tr|A9SJF8|A9SJF8_PHYPA Predicted protein OS=Physcomitrella paten... 121 2e-26 tr|A9SJG0|A9SJG0_PHYPA Predicted protein (Fragment) OS=Physcomit... 117 3e-25 tr|A9T642|A9T642_PHYPA Predicted protein OS=Physcomitrella paten... 115 2e-24 tr|Q2QVL9|Q2QVL9_ORYSJ Transposon protein, putative, Mutator sub... 110 7e-23 tr|A3CG00|A3CG00_ORYSJ Putative uncharacterized protein OS=Oryza... 110 7e-23 tr|A2ZJ45|A2ZJ45_ORYSI Putative uncharacterized protein OS=Oryza... 110 7e-23 tr|A5BS04|A5BS04_VITVI Putative uncharacterized protein OS=Vitis... 105 1e-21 tr|B6T390|B6T390_MAIZE RNA binding protein OS=Zea mays PE=2 SV=1 103 7e-21 tr|A7P9E2|A7P9E2_VITVI Chromosome chr3 scaffold_8, whole genome ... 103 7e-21 tr|Q945N2|Q945N2_ARATH At2g43970/F6E13.10 OS=Arabidopsis thalian... 102 2e-20 tr|O80567|O80567_ARATH Expressed protein (At2g43970/F6E13.10) (P... 102 2e-20 tr|Q2QVM0|Q2QVM0_ORYSJ Transposon protein, putative, Mutator sub... 101 3e-20 tr|Q9LHL3|Q9LHL3_ARATH RNA-binding protein-like OS=Arabidopsis t... 99 1e-19 tr|Q94LD0|Q94LD0_ORYSA Putative RNA-binding protein OS=Oryza sat... 99 1e-19 tr|Q10I29|Q10I29_ORYSJ Os03g0566500 protein OS=Oryza sativa subs... 99 1e-19 tr|B8AKV5|B8AKV5_ORYSI Putative uncharacterized protein OS=Oryza... 99 1e-19 tr|A3AJM8|A3AJM8_ORYSJ Putative uncharacterized protein OS=Oryza... 99 1e-19 tr|Q69L83|Q69L83_ORYSJ Os07g0102500 protein OS=Oryza sativa subs... 97 6e-19 tr|B8B6I7|B8B6I7_ORYSI Putative uncharacterized protein OS=Oryza... 97 6e-19 tr|A3BFR4|A3BFR4_ORYSJ Putative uncharacterized protein OS=Oryza... 97 6e-19 tr|Q9SEU9|Q9SEU9_BRANA RNA-binding protein homolog OS=Brassica n... 97 8e-19 tr|Q6ZJG0|Q6ZJG0_ORYSJ Os08g0542900 protein OS=Oryza sativa subs... 86 1e-15 tr|B8B975|B8B975_ORYSI Putative uncharacterized protein OS=Oryza... 86 1e-15 tr|Q9FL36|Q9FL36_ARATH Similarity to RNA-binding protein OS=Arab... 78 3e-13
>tr|Q53M44|Q53M44_ORYSJ At2g43970/F6E13.10 OS=Oryza sativa subsp. japonica PE=4 SV=1 Length = 505
Score = 124 bits (312), Expect = 3e-27 Identities = 75/193 (38%), Positives = 101/193 (52%), Gaps = 5/193 (2%) Frame = -3
Query: 570 LEEIQSRTVVAENLPDDHSIESMEQLFSSVGNVKMIRVCEPEASNGTNQAA-KFSKADMV 394 LEE+Q+R VVAENLPDDH +++ +LFS+VG+VK IR C P+ NGT + +K DM+ Sbjct: 227 LEELQARIVVAENLPDDHCYQNLMKLFSTVGSVKTIRTCYPQTPNGTGPVTNRSAKLDML 286
Query: 393 VSNKLHALVEYETVEQAERAVAELTDQGNWXXXXXXXXXXXRTNKHNASK--SHKVNEGA 220 +NKLHA VEY+TVE AE+A+ EL D+ NW K K H +N Sbjct: 287 FANKLHAFVEYDTVEDAEKAIVELNDERNWRNGLRVRLLNTCMTKGGKGKKGGHDIN--- 343
Query: 219 DGSGPEDDAATSASDNVVDRGGEEG--NIQDRSEELPGGDNAQLDGSSKKXXXXXXXXXX 46 DG G EDD +TS N ++ GEE + E+LP + K Sbjct: 344 DGHGVEDDVSTSNQSN--EKHGEEALQTPDAQGEQLPDESAGDMGRGRGKGRGRGGRGRG 401
Query: 45 XXGQYHPNGGRSH 7 YH N +S+ Sbjct: 402 RGYHYHNNNQQSY 414
>tr|Q53JK0|Q53JK0_ORYSJ La domain-containing protein, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os11g14300 PE=4 SV=1 Length = 341
Score = 124 bits (312), Expect = 3e-27 Identities = 75/193 (38%), Positives = 101/193 (52%), Gaps = 5/193 (2%) Frame = -3
Query: 570 LEEIQSRTVVAENLPDDHSIESMEQLFSSVGNVKMIRVCEPEASNGTNQAA-KFSKADMV 394 LEE+Q+R VVAENLPDDH +++ +LFS+VG+VK IR C P+ NGT + +K DM+ Sbjct: 63 LEELQARIVVAENLPDDHCYQNLMKLFSTVGSVKTIRTCYPQTPNGTGPVTNRSAKLDML 122
Query: 393 VSNKLHALVEYETVEQAERAVAELTDQGNWXXXXXXXXXXXRTNKHNASK--SHKVNEGA 220 +NKLHA VEY+TVE AE+A+ EL D+ NW K K H +N Sbjct: 123 FANKLHAFVEYDTVEDAEKAIVELNDERNWRNGLRVRLLNTCMTKGGKGKKGGHDIN--- 179
Query: 219 DGSGPEDDAATSASDNVVDRGGEEG--NIQDRSEELPGGDNAQLDGSSKKXXXXXXXXXX 46 DG G EDD +TS N ++ GEE + E+LP + K Sbjct: 180 DGHGVEDDVSTSNQSN--EKHGEEALQTPDAQGEQLPDESAGDMGRGRGKGRGRGGRGRG 237
Query: 45 XXGQYHPNGGRSH 7 YH N +S+ Sbjct: 238 RGYHYHNNNQQSY 250
>tr|Q0ITJ6|Q0ITJ6_ORYSJ Os11g0248200 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os11g0248200 PE=4 SV=1 Length = 354
Score = 124 bits (312), Expect = 3e-27 Identities = 75/193 (38%), Positives = 101/193 (52%), Gaps = 5/193 (2%) Frame = -3
Query: 570 LEEIQSRTVVAENLPDDHSIESMEQLFSSVGNVKMIRVCEPEASNGTNQAA-KFSKADMV 394 LEE+Q+R VVAENLPDDH +++ +LFS+VG+VK IR C P+ NGT + +K DM+ Sbjct: 76 LEELQARIVVAENLPDDHCYQNLMKLFSTVGSVKTIRTCYPQTPNGTGPVTNRSAKLDML 135
Query: 393 VSNKLHALVEYETVEQAERAVAELTDQGNWXXXXXXXXXXXRTNKHNASK--SHKVNEGA 220 +NKLHA VEY+TVE AE+A+ EL D+ NW K K H +N Sbjct: 136 FANKLHAFVEYDTVEDAEKAIVELNDERNWRNGLRVRLLNTCMTKGGKGKKGGHDIN--- 192
Query: 219 DGSGPEDDAATSASDNVVDRGGEEG--NIQDRSEELPGGDNAQLDGSSKKXXXXXXXXXX 46 DG G EDD +TS N ++ GEE + E+LP + K Sbjct: 193 DGHGVEDDVSTSNQSN--EKHGEEALQTPDAQGEQLPDESAGDMGRGRGKGRGRGGRGRG 250
Query: 45 XXGQYHPNGGRSH 7 YH N +S+ Sbjct: 251 RGYHYHNNNQQSY 263
>tr|B8BJX1|B8BJX1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_35696 PE=4 SV=1 Length = 489
Score = 124 bits (312), Expect = 3e-27 Identities = 75/193 (38%), Positives = 101/193 (52%), Gaps = 5/193 (2%) Frame = -3
Query: 570 LEEIQSRTVVAENLPDDHSIESMEQLFSSVGNVKMIRVCEPEASNGTNQAA-KFSKADMV 394 LEE+Q+R VVAENLPDDH +++ +LFS+VG+VK IR C P+ NGT + +K DM+ Sbjct: 213 LEELQARIVVAENLPDDHCYQNLMKLFSTVGSVKTIRTCYPQTPNGTGPVTNRSAKLDML 272
Query: 393 VSNKLHALVEYETVEQAERAVAELTDQGNWXXXXXXXXXXXRTNKHNASK--SHKVNEGA 220 +NKLHA VEY+TVE AE+A+ EL D+ NW K K H +N Sbjct: 273 FANKLHAFVEYDTVEDAEKAIVELNDERNWRNGLRVRLLNTCMTKGGKGKKGGHDIN--- 329
Query: 219 DGSGPEDDAATSASDNVVDRGGEEG--NIQDRSEELPGGDNAQLDGSSKKXXXXXXXXXX 46 DG G EDD +TS N ++ GEE + E+LP + K Sbjct: 330 DGHGVEDDVSTSNQSN--EKHGEEALQTPDAQGEQLPDESAGDMGRGRGKGRGRGGRGRG 387
Query: 45 XXGQYHPNGGRSH 7 YH N +S+ Sbjct: 388 RGYHYHNNNQQSY 400
>tr|A7QB10|A7QB10_VITVI Chromosome chr5 scaffold_72, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034759001 PE=4 SV=1 Length = 295
Score = 124 bits (312), Expect = 3e-27 Identities = 80/193 (41%), Positives = 114/193 (59%), Gaps = 3/193 (1%) Frame = -3
Query: 570 LEEIQSRTVVAENLPDDHSIESMEQLFSSVGNVKMIRVCEPEASN-GTNQAAKFSKAD-M 397 +EE+QSR VVAENLP+DH +++ ++FS+VG+VK IR C+P+ SN G + AA+ SK D M Sbjct: 63 MEELQSRIVVAENLPEDHCHQNLMKIFSAVGSVKTIRTCQPQTSNGGASSAARSSKTDNM 122
Query: 396 VVSNKLHALVEYETVEQAERAVAELTDQGNWXXXXXXXXXXXRTNKHNASKSHKVNEGAD 217 + SNKLHA VEYE++E AE+AV EL D+GNW R K ++S K +EG + Sbjct: 123 LFSNKLHAFVEYESIELAEKAVVELNDEGNWRSGLRVRLMHRRVAKSAQARSRKGHEG-E 181
Query: 216 GSGPEDDAATSASDNVVDRGGEEGNIQDRSEELPGGDNA-QLDGSSKKXXXXXXXXXXXX 40 EDDA TS D+ E+ ++ S E G ++ +G+ +K Sbjct: 182 AICEEDDACTS-EQLPNDKQPEDPDV--HSHEHAGEEHINDKEGAQRKGRSRGRGKGRGR 238
Query: 39 GQYHPNGGRSHPV 1 GQYH +G R + V Sbjct: 239 GQYHHHGNRGNHV 251
>tr|A3CA75|A3CA75_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_032197 PE=4 SV=1 Length = 452
Score = 124 bits (312), Expect = 3e-27 Identities = 75/193 (38%), Positives = 101/193 (52%), Gaps = 5/193 (2%) Frame = -3
Query: 570 LEEIQSRTVVAENLPDDHSIESMEQLFSSVGNVKMIRVCEPEASNGTNQAA-KFSKADMV 394 LEE+Q+R VVAENLPDDH +++ +LFS+VG+VK IR C P+ NGT + +K DM+ Sbjct: 174 LEELQARIVVAENLPDDHCYQNLMKLFSTVGSVKTIRTCYPQTPNGTGPVTNRSAKLDML 233
Query: 393 VSNKLHALVEYETVEQAERAVAELTDQGNWXXXXXXXXXXXRTNKHNASK--SHKVNEGA 220 +NKLHA VEY+TVE AE+A+ EL D+ NW K K H +N Sbjct: 234 FANKLHAFVEYDTVEDAEKAIVELNDERNWRNGLRVRLLNTCMTKGGKGKKGGHDIN--- 290
Query: 219 DGSGPEDDAATSASDNVVDRGGEEG--NIQDRSEELPGGDNAQLDGSSKKXXXXXXXXXX 46 DG G EDD +TS N ++ GEE + E+LP + K Sbjct: 291 DGHGVEDDVSTSNQSN--EKHGEEALQTPDAQGEQLPDESAGDMGRGRGKGRGRGGRGRG 348
Query: 45 XXGQYHPNGGRSH 7 YH N +S+ Sbjct: 349 RGYHYHNNNQQSY 361
>tr|A9SJF8|A9SJF8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_165271 PE=4 SV=1 Length = 913
Score = 121 bits (304), Expect = 2e-26 Identities = 83/193 (43%), Positives = 102/193 (52%), Gaps = 29/193 (15%) Frame = -3
Query: 570 LEEIQSRTVVAENLPDDHSIESMEQLFSSVGNVKMIRVCEPEASNGTNQ-AAKFSKADMV 394 LEEIQ+RTVVAENLP++ SIE++E LF VG VKM+R+C PEA+NG N AAK K DM+ Sbjct: 472 LEEIQARTVVAENLPENPSIETIEPLFRKVGTVKMVRICSPEAANGANSTAAKHPKTDML 531
Query: 393 VSNK------------LHALVEYETVEQAERAVAELTDQGNW--XXXXXXXXXXXRTNKH 256 +SNK LHALVE+ETVE AE+AVAELTDQ NW NK Sbjct: 532 ISNKVNRNCGSDNVFTLHALVEFETVELAEKAVAELTDQRNWRSGLRVRLLLRRQFQNKQ 591
Query: 255 N---ASKSHKVNEGADG-----SGPEDDAATSASDNVVDRGGEEGNIQ----DRSEEL-- 118 N A DG + D A +D D+ G E DR +E+ Sbjct: 592 NYQQAPHQRTRKPSMDGIDLVMDDEDGDKAEKDADRSRDKAGGESTCHNHHADRGDEVMG 651
Query: 117 PGGDNAQLDGSSK 79 GGD+ G + Sbjct: 652 EGGDHVNKKGRGR 664
>tr|A9SJG0|A9SJG0_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_80245 PE=4 SV=1 Length = 507
Score = 117 bits (294), Expect = 3e-25 Identities = 80/199 (40%), Positives = 103/199 (51%), Gaps = 36/199 (18%) Frame = -3
Query: 567 EEIQSRTVVAENLPDDHSIESMEQLFSSVGNVKMIRVCEPEASNGTNQA-AKFSKADMVV 391 EE+Q+RTVVAENLP++HSIESMEQLF VG VK++R+C P+A+ GT+ A + +K+DM+V Sbjct: 235 EEVQARTVVAENLPEEHSIESMEQLFGKVGTVKLVRICSPDAAIGTHGAGGRHTKSDMLV 294
Query: 390 SNKLHALVEYETVEQAERA-------------------VAELTDQGNW--XXXXXXXXXX 274 SNKLHALVEYETVE AE+A V ELTD+ NW Sbjct: 295 SNKLHALVEYETVELAEKAGSKRLQSGANAYKVTSSAQVTELTDERNWRSGLRVRLLLKR 354
Query: 273 XRTNKHN---ASKSHKVNEGADG-----SGPEDDAATSASDNVVDRGGEEGNIQ----DR 130 NK N A DG + D A +D D+ G E DR Sbjct: 355 QFQNKQNYQQAPHQRTRKPSMDGIDLVMDDEDGDKAEKDADRSRDKAGGESTCHNHHADR 414
Query: 129 SEEL--PGGDNAQLDGSSK 79 +E+ GGD+ G + Sbjct: 415 GDEVMGEGGDHVNKKGRGR 433
>tr|A9T642|A9T642_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_140870 PE=4 SV=1 Length = 295
Score = 115 bits (287), Expect = 2e-24 Identities = 65/149 (43%), Positives = 91/149 (61%), Gaps = 6/149 (4%) Frame = -3
Query: 570 LEEIQSRTVVAENLPDDHSIESMEQLFSSVGNVKMIRVCEPEASNGT-NQAAKFSKADMV 394 LEE+QSRTVVAE+LP++ SI S+++LF VG VK +R+C PE +NG + +AK K D++ Sbjct: 63 LEEVQSRTVVAEDLPENSSIGSIQELFGKVGKVKSVRICPPEVANGAISSSAKHPKTDIL 122
Query: 393 VSNKLHALVEYETVEQAERAVAELTDQGNWXXXXXXXXXXXRTN-----KHNASKSHKVN 229 +SNKLHALVE+ETVE AE+AV ELT++ NW R + N K H + Sbjct: 123 ISNKLHALVEFETVELAEKAVVELTNERNWRSGLRTRLLQRRQEEGKKLEKNGDKPH--D 180
Query: 228 EGADGSGPEDDAATSASDNVVDRGGEEGN 142 +G++ + A DN V R G+ Sbjct: 181 KGSEELARQHHHADRGEDNTVSRATGSGH 209
>tr|Q2QVL9|Q2QVL9_ORYSJ Transposon protein, putative, Mutator sub-class, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os12g12360 PE=4 SV=2 Length = 478
Score = 110 bits (274), Expect = 7e-23 Identities = 60/134 (44%), Positives = 85/134 (63%), Gaps = 1/134 (0%) Frame = -3
Query: 570 LEEIQSRTVVAENLPDDHSIESMEQLFSSVGNVKMIRVCEPEASNGTNQAA-KFSKADMV 394 ++++QSR VVAENLP D +++ ++FS+VG+VK IR C P++SNG + A + +K DM+ Sbjct: 205 MQDLQSRIVVAENLPGDPCYQNLMKIFSTVGSVKTIRTCYPQSSNGNSPATNRSAKLDML 264
Query: 393 VSNKLHALVEYETVEQAERAVAELTDQGNWXXXXXXXXXXXRTNKHNASKSHKVNEGADG 214 +NKLHA VEYET+E AE+A+ EL D+ NW K A K K ADG Sbjct: 265 FANKLHAFVEYETLEDAEKAILELNDEKNWRNGLRVRLLNTCMTK-GAGKGKKGVHEADG 323
Query: 213 SGPEDDAATSASDN 172 +G E+D +TS N Sbjct: 324 NG-EEDVSTSNQSN 336
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