BP920203 |
Clone id |
YMU001_000134_C06 |
Library |
YMU01 |
Length |
544 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000134_C06. |
Accession |
BP920203 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1114Contig1 |
Sequence |
GTTTCTTAACATGGCCGAAAGTCCTTGTTGAACTTTCAAGAAGTAATTACAATGTATTGG CTGTTTGAAACATCAGCTTGATCACCAGATATTGGTGATTGCTTAGACTGTGCACGCTCT CCGGCAAAGCCAAGTCCCTGACAACACAGGTTGGTCTGGGTTAAAAGGTATAGACCAATG ATAGCTACAGAACTCCAACCAAGAGGAAAACTGCTGGCCACATAAAACAAGTTCTGCACC CATCTTTGCAGTCCTACAAACCTTCTTTCATAATACACACTGGTCCAGCAGGCTCTCTCA AGAAAGGGTTCTGATACATGGCTGAGGTCTTAAGATCCTCACCAAATAGTCTCGAATCTC TGGAATGATTTTTTGTATCAATGCTGGATACCCTGTCATGGTACACATTTGCTTGTGCTG TTCGAGGATAAATAACACACATGTATGCCGCAGCGATAAAGCATGGTATGCCTCTGTCAA GTCGTACACAATCGCCACATTGTCAACAGTCAAATCCTGCGCTATAGCATGCTCACACAA TCTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P34568 |
Definition |
sp|P34568|BAT43_CAEEL BTB and MATH domain-containing protein 43 OS=Caenorhabditis elegans |
Align length |
73 |
Score (bit) |
33.9 |
E-value |
0.52 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SKE0 |
Definition |
tr|A9SKE0|A9SKE0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
75 |
Score (bit) |
114.0 |
E-value |
3.0e-24 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920203|Adiantum capillus-veneris mRNA, clone: YMU001_000134_C06. (544 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SKE0|A9SKE0_PHYPA Predicted protein OS=Physcomitrella paten... 114 3e-24 tr|A9SHX6|A9SHX6_PHYPA Predicted protein OS=Physcomitrella paten... 112 1e-23 tr|Q688N3|Q688N3_ORYSJ Os05g0398100 protein OS=Oryza sativa subs... 100 4e-20 tr|B8AY14|B8AY14_ORYSI Putative uncharacterized protein OS=Oryza... 100 4e-20 tr|A3B3T4|A3B3T4_ORYSJ Putative uncharacterized protein OS=Oryza... 100 4e-20 tr|A7NWJ3|A7NWJ3_VITVI Chromosome chr5 scaffold_2, whole genome ... 93 8e-18 tr|B8A3I0|B8A3I0_MAIZE Putative uncharacterized protein OS=Zea m... 92 1e-17 tr|A7PU99|A7PU99_VITVI Chromosome chr7 scaffold_31, whole genome... 84 5e-15 tr|Q56ZQ9|Q56ZQ9_ARATH Putative uncharacterized protein At5g1933... 80 9e-14 tr|A5ASC1|A5ASC1_VITVI Putative uncharacterized protein OS=Vitis... 71 4e-11 tr|A5C2B5|A5C2B5_VITVI Putative uncharacterized protein OS=Vitis... 67 6e-10 tr|Q9FYA4|Q9FYA4_ARATH Putative uncharacterized protein T19L5_20... 65 2e-09 tr|Q8RY88|Q8RY88_ARATH Putative uncharacterized protein At5g1306... 65 2e-09 tr|B7U179|B7U179_ARATH ABAP1 OS=Arabidopsis thaliana GN=ABAP1 PE... 65 2e-09 tr|A7R8X3|A7R8X3_VITVI Chromosome undetermined scaffold_3067, wh... 62 3e-08 tr|A7R5F6|A7R5F6_VITVI Chromosome undetermined scaffold_955, who... 62 3e-08 tr|A7R478|A7R478_VITVI Chromosome undetermined scaffold_624, who... 61 4e-08 tr|A7QXT0|A7QXT0_VITVI Chromosome undetermined scaffold_230, who... 57 8e-07 tr|A5AU57|A5AU57_VITVI Putative uncharacterized protein (Fragmen... 52 2e-05 tr|A8JIB4|A8JIB4_CHLRE Predicted protein (Fragment) OS=Chlamydom... 42 0.021 tr|B7GB01|B7GB01_PHATR Predicted protein OS=Phaeodactylum tricor... 42 0.028 tr|Q6ERL7|Q6ERL7_ORYSJ Speckle-type POZ protein(Spop)-like OS=Or... 39 0.23 tr|A3BXP2|A3BXP2_ORYSJ Putative uncharacterized protein OS=Oryza... 39 0.23 tr|Q2HVB4|Q2HVB4_MEDTR BTB/POZ; MATH OS=Medicago truncatula GN=M... 38 0.31 tr|B8BVE2|B8BVE2_THAPS Predicted protein OS=Thalassiosira pseudo... 38 0.40 tr|A8QBM6|A8QBM6_BRUMA BTB/POZ domain containing protein OS=Brug... 37 0.52 tr|A9NUQ7|A9NUQ7_PICSI Putative uncharacterized protein OS=Picea... 37 0.68 tr|A7PG96|A7PG96_VITVI Chromosome chr6 scaffold_15, whole genome... 37 0.68 tr|Q9SRV1|Q9SRV1_ARATH F20H23.23 protein (AT3g03740/F20H23_23) O... 36 1.2 tr|Q8LGI9|Q8LGI9_ARATH Putative uncharacterized protein OS=Arabi... 36 1.2
>tr|A9SKE0|A9SKE0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_106616 PE=4 SV=1 Length = 695
Score = 114 bits (286), Expect = 3e-24 Identities = 52/75 (69%), Positives = 66/75 (88%) Frame = -2
Query: 543 RLCEHAIAQDLTVDNVAIVYDLTEAYHALSLRHTCVLFILEQHKQMCTMTGYPALIQKII 364 RLCE+++AQ+LT++ + VYDL EAYHALSLR TCVLFIL+ H+QMC++TGYPAL+ +I Sbjct: 617 RLCEYSMAQNLTLETLMNVYDLAEAYHALSLRDTCVLFILKHHEQMCSITGYPALLHRIT 676
Query: 363 PEIRDYLVRILRPQP 319 PEIR+YL RILRPQP Sbjct: 677 PEIREYLRRILRPQP 691
>tr|A9SHX6|A9SHX6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_106476 PE=4 SV=1 Length = 698
Score = 112 bits (280), Expect = 1e-23 Identities = 53/75 (70%), Positives = 64/75 (85%) Frame = -2
Query: 543 RLCEHAIAQDLTVDNVAIVYDLTEAYHALSLRHTCVLFILEQHKQMCTMTGYPALIQKII 364 RLCE++IAQ+LT++ V V+DL EAYHALSLR TCVLFIL+ H+QMC MTGYPAL+ +I Sbjct: 620 RLCEYSIAQNLTLETVMNVFDLAEAYHALSLRDTCVLFILKHHEQMCGMTGYPALLHRIS 679
Query: 363 PEIRDYLVRILRPQP 319 EIR+YL RILRPQP Sbjct: 680 SEIREYLRRILRPQP 694
>tr|Q688N3|Q688N3_ORYSJ Os05g0398100 protein OS=Oryza sativa subsp. japonica GN=P0605G01.6 PE=4 SV=1 Length = 752
Score = 100 bits (250), Expect = 4e-20 Identities = 44/73 (60%), Positives = 61/73 (83%) Frame = -2
Query: 543 RLCEHAIAQDLTVDNVAIVYDLTEAYHALSLRHTCVLFILEQHKQMCTMTGYPALIQKII 364 RLCE+ IAQD+ VDNV+ +YDL+EA+HA+SLRHTCVLFILEQ +++C +G LIQ++I Sbjct: 673 RLCEYTIAQDVNVDNVSDMYDLSEAFHAMSLRHTCVLFILEQFEKICVKSGSSQLIQRVI 732
Query: 363 PEIRDYLVRILRP 325 PE+R++ + LRP Sbjct: 733 PELRNFFAKALRP 745
>tr|B8AY14|B8AY14_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_19876 PE=4 SV=1 Length = 677
Score = 100 bits (250), Expect = 4e-20 Identities = 44/73 (60%), Positives = 61/73 (83%) Frame = -2
Query: 543 RLCEHAIAQDLTVDNVAIVYDLTEAYHALSLRHTCVLFILEQHKQMCTMTGYPALIQKII 364 RLCE+ IAQD+ VDNV+ +YDL+EA+HA+SLRHTCVLFILEQ +++C +G LIQ++I Sbjct: 598 RLCEYTIAQDVNVDNVSDMYDLSEAFHAMSLRHTCVLFILEQFEKICVKSGSSQLIQRVI 657
Query: 363 PEIRDYLVRILRP 325 PE+R++ + LRP Sbjct: 658 PELRNFFAKALRP 670
>tr|A3B3T4|A3B3T4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_017706 PE=4 SV=1 Length = 599
Score = 100 bits (250), Expect = 4e-20 Identities = 44/73 (60%), Positives = 61/73 (83%) Frame = -2
Query: 543 RLCEHAIAQDLTVDNVAIVYDLTEAYHALSLRHTCVLFILEQHKQMCTMTGYPALIQKII 364 RLCE+ IAQD+ VDNV+ +YDL+EA+HA+SLRHTCVLFILEQ +++C +G LIQ++I Sbjct: 520 RLCEYTIAQDVNVDNVSDMYDLSEAFHAMSLRHTCVLFILEQFEKICVKSGSSQLIQRVI 579
Query: 363 PEIRDYLVRILRP 325 PE+R++ + LRP Sbjct: 580 PELRNFFAKALRP 592
>tr|A7NWJ3|A7NWJ3_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019943001 PE=4 SV=1 Length = 149
Score = 93.2 bits (230), Expect = 8e-18 Identities = 42/76 (55%), Positives = 61/76 (80%), Gaps = 1/76 (1%) Frame = -2
Query: 543 RLCEHAIAQDLTVDNVAIVYDLTEAYHALSLRHTCVLFILEQHKQMCTMTGYPALIQKII 364 RLCE+ IAQD++++NV+ +Y+L+EA+HA+SLRHTC+LFILEQ ++ + G+ LIQ+II Sbjct: 69 RLCEYTIAQDISLENVSSMYELSEAFHAISLRHTCILFILEQFSKLSSRPGHSHLIQRII 128
Query: 363 PEIRDYLVRIL-RPQP 319 PEIR Y + L +P P Sbjct: 129 PEIRTYFAKALTKPNP 144
>tr|B8A3I0|B8A3I0_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 178
Score = 92.4 bits (228), Expect = 1e-17 Identities = 39/71 (54%), Positives = 58/71 (81%) Frame = -2
Query: 543 RLCEHAIAQDLTVDNVAIVYDLTEAYHALSLRHTCVLFILEQHKQMCTMTGYPALIQKII 364 RLCE+ IA+D+ +DNV+ +YDL+EA+HA+SLRHTC+L+ILE ++CT G LIQ++I Sbjct: 92 RLCEYTIAKDVNLDNVSDMYDLSEAFHAVSLRHTCILYILEHFNKICTRAGSAQLIQRVI 151
Query: 363 PEIRDYLVRIL 331 PE+R++L + L Sbjct: 152 PELRNFLTKAL 162
>tr|A7PU99|A7PU99_VITVI Chromosome chr7 scaffold_31, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00023713001 PE=4 SV=1 Length = 704
Score = 84.0 bits (206), Expect = 5e-15 Identities = 40/82 (48%), Positives = 62/82 (75%), Gaps = 1/82 (1%) Frame = -2
Query: 543 RLCEHAIAQDLTVDNVAIVYDLTEAYHALSLRHTCVLFILEQHKQMCTMTGYPALIQKII 364 RLCE+AIAQD++V+NV+++Y+L+EA++A++LRHTC+L+ILE +++ Y LIQ I+ Sbjct: 622 RLCEYAIAQDISVENVSLMYELSEAFNAMTLRHTCILYILEHFEKLTVKPWYSRLIQCIL 681
Query: 363 PEIRDYLVRIL-RPQPCIRTLS 301 PEIR + L +P + TLS Sbjct: 682 PEIRKFFREALTKPVEPVLTLS 703
>tr|Q56ZQ9|Q56ZQ9_ARATH Putative uncharacterized protein At5g19330 OS=Arabidopsis thaliana GN=At5g19330 PE=4 SV=1 Length = 115
Score = 79.7 bits (195), Expect = 9e-14 Identities = 34/71 (47%), Positives = 53/71 (74%) Frame = -2
Query: 543 RLCEHAIAQDLTVDNVAIVYDLTEAYHALSLRHTCVLFILEQHKQMCTMTGYPALIQKII 364 RLCE+ IAQD+T++++ +Y+L+EA+HA+SLR C++FILE ++ +M L+Q+ I Sbjct: 33 RLCEYTIAQDITLESIGDMYELSEAFHAMSLRQACIMFILEHFDKLSSMPWQNELVQRTI 92
Query: 363 PEIRDYLVRIL 331 PEIR+Y R L Sbjct: 93 PEIREYFCRAL 103
>tr|A5ASC1|A5ASC1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012185 PE=4 SV=1 Length = 726
Score = 70.9 bits (172), Expect = 4e-11 Identities = 29/51 (56%), Positives = 44/51 (86%) Frame = -2
Query: 543 RLCEHAIAQDLTVDNVAIVYDLTEAYHALSLRHTCVLFILEQHKQMCTMTG 391 RLCE+ IAQD++++NV+ +Y+L+EA+HA+SLRHTC+LFILEQ ++ + G Sbjct: 613 RLCEYTIAQDISLENVSSMYELSEAFHAISLRHTCILFILEQFSKLSSRPG 663
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