BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920207|Adiantum capillus-veneris mRNA, clone:
YMU001_000134_C10.
         (471 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A4IIL4|BROX_XENTR BRO1 domain-containing protein BROX OS=Xeno...    32   1.1  
sp|Q9LUD4|R18A3_ARATH 60S ribosomal protein L18a-3 OS=Arabidopsi...    31   2.4  
sp|Q5YGP7|PLET2_ARATH AP2-like ethylene-responsive transcription...    30   4.2  
sp|Q3U962|CO5A2_MOUSE Collagen alpha-2(V) chain OS=Mus musculus ...    29   9.1  
sp|Q943F3|RL18A_ORYSJ 60S ribosomal protein L18a OS=Oryza sativa...    29   9.3  

>sp|A4IIL4|BROX_XENTR BRO1 domain-containing protein BROX OS=Xenopus
           tropicalis GN=brox PE=2 SV=1
          Length = 411

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = -3

Query: 382 KMRFLPSYSYCTRGHLSLSLHILKENILTLEEASTFY 272
           KM F  +YSYC  G   LS     E I +L+EA  FY
Sbjct: 245 KMCFYMAYSYCYHGQTLLSADKCGEAIRSLQEAEKFY 281


>sp|Q9LUD4|R18A3_ARATH 60S ribosomal protein L18a-3 OS=Arabidopsis
           thaliana GN=RPL18AC PE=2 SV=1
          Length = 178

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +1

Query: 304 YSLSIYARTRISAPL---YNMNKMEEISSSSYQLFQIQMSLHKHPTTSNNY 447
           Y + ++ R  + A     Y M K++++  S+ Q+  I     K+PTT  NY
Sbjct: 27  YRMKLWGRNEVCAKSKFWYFMRKLKKVKKSNGQMLAINEIFEKNPTTIKNY 77


>sp|Q5YGP7|PLET2_ARATH AP2-like ethylene-responsive transcription
           factor PLT2 OS=Arabidopsis thaliana GN=PLT2 PE=2 SV=1
          Length = 568

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
 Frame = +1

Query: 271 SKMLKLPPMLKYSLSI---YARTRISAPLYNMNKMEEISSSSYQLFQIQMSLHKHPTTSN 441
           S  L+L P   Y LSI   +       PL  +    +IS        IQ  LH H   +N
Sbjct: 412 SSRLQLQP---YPLSIQQPFEHLHHHQPLLTLQNNNDISQYHDSFSYIQTQLHLHQQQTN 468

Query: 442 NYLQ 453
           NYLQ
Sbjct: 469 NYLQ 472


>sp|Q3U962|CO5A2_MOUSE Collagen alpha-2(V) chain OS=Mus musculus
            GN=Col5a2 PE=1 SV=1
          Length = 1497

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +3

Query: 27   VCRN*IGREIQPQQNLEIPMPISKCQPLAFYGELHIKFHYTITNQV-TKRN 176
            +CRN +G      +NL+  + +     L   GE +I+F YT+     +KRN
Sbjct: 1402 ICRNTVGYMDDQAKNLKKAVVLKGSNDLEIKGEGNIRFRYTVLQDTCSKRN 1452


>sp|Q943F3|RL18A_ORYSJ 60S ribosomal protein L18a OS=Oryza sativa
           subsp. japonica GN=RPL18A PE=2 SV=1
          Length = 178

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +1

Query: 304 YSLSIYARTRISAPL---YNMNKMEEISSSSYQLFQIQMSLHKHPTTSNNY 447
           Y + ++A   + A     Y + K++++  S+ Q+  I     K+PTT  NY
Sbjct: 27  YRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQILAINEIFEKNPTTIKNY 77

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920207|Adiantum capillus-veneris mRNA, clone:
YMU001_000134_C10.
         (471 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A8N691|A8N691_COPC7 Putative uncharacterized protein OS=Copri...    33   7.1  
tr|B0D0Y0|B0D0Y0_LACBS Predicted protein OS=Laccaria bicolor (st...    33   9.3  

>tr|A8N691|A8N691_COPC7 Putative uncharacterized protein
            OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC
            9003) GN=CC1G_02000 PE=4 SV=1
          Length = 1303

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = +1

Query: 289  PPMLKYSLSIYARTRISAPLYNMNKMEEISSSSYQLFQIQMSLHKHPTTSN 441
            P +  YSLS+ ++       ++M+ ME +SSS + + QI +     PT SN
Sbjct: 1042 PTLNNYSLSMDSKQGSRLFKFDMSLMERLSSSGFPMSQIDVQRRMRPTISN 1092


>tr|B0D0Y0|B0D0Y0_LACBS Predicted protein OS=Laccaria bicolor (strain
            S238N-H82) GN=LACBIDRAFT_313832 PE=4 SV=1
          Length = 2289

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = +1

Query: 289  PPMLKYSLSIYARTRISAPLYNMNKMEEISSSSYQLFQIQMSLHKHPTTSN 441
            P +  YSLS+ +R       ++M+ ME +SSS + + QI +     P  SN
Sbjct: 1191 PTLNNYSLSMDSRRGSELYKFDMSLMERLSSSGFPMSQIDVQRRMRPEISN 1241