BP920208
Clone id YMU001_000134_C11
Library
Length 509
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000134_C11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GAGATATTACCTGCAGGTACTCCAGAGCCGGAGATTCCTTGGATAATTCCGAGAGACTAT
CTCCTCATTCTGCAGATGAGATAGACGGATCTGAGTTTTTTGCGCCTTACGAGAAAAAGG
AGGCAGATCTGCGAGGATTAATCAATACGTTCCACGAGTACAAGGAGTATTGCAAGGAGT
ACCGCGAAAAGTACCCTGTATATATTAAACTCAATGGAGTTATTGAACATAATAAGAAGC
CTTTTGAATCTCTCAGGAAGGACATGGAGCGGGCTAGATGTAAGGATGATGAGAAGAAGA
TTGCTCACACCTGTGCAAAAGTAAGGCGAGAATATGCTCTGCACCACAAGAAGCGAAATC
GTATGCTTCATACATTTCGGATACTGCATGAGGAACTCAAGGCAATCAAGACCAGATGCA
AGGAGTACGCAGAGAAAATGGGGCAAGGTTGAGTGTAAAGAGTGGATCTATTGGAAAGCT
GTACCTCTTCCAGTTTGCCTTTATAAGGT
■■Homology search results ■■ -
sp_hit_id Q6ZNQ3
Definition sp|Q6ZNQ3|LRC69_HUMAN Leucine-rich repeat-containing protein 69 OS=Homo sapiens
Align length 43
Score (bit) 32.7
E-value 1.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920208|Adiantum capillus-veneris mRNA, clone:
YMU001_000134_C11.
(509 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6ZNQ3|LRC69_HUMAN Leucine-rich repeat-containing protein 69 ... 33 1.0
sp|Q58718|RAD50_METJA DNA double-strand break repair rad50 ATPas... 31 2.9
sp|Q8NF91|SYNE1_HUMAN Nesprin-1 OS=Homo sapiens GN=SYNE1 PE=1 SV=2 31 3.9
sp|P32380|NUF1_YEAST Protein NUF1 OS=Saccharomyces cerevisiae GN... 31 3.9
sp|P44898|Y841_HAEIN Uncharacterized protein HI0841 OS=Haemophil... 30 5.0
sp|Q8MET5|MATK_EUCUL Maturase K OS=Eucommia ulmoides GN=matK PE=... 30 5.0
sp|Q479R3|HEM1_DECAR Glutamyl-tRNA reductase OS=Dechloromonas ar... 30 5.0
sp|Q1DU03|SET2_COCIM Histone-lysine N-methyltransferase, H3 lysi... 30 6.6
sp|O20672|CYB_TOXGO Cytochrome b OS=Toxoplasma gondii GN=MT-CYB ... 30 6.6
sp|P37467|XPAC_BACSU Protein xpaC OS=Bacillus subtilis GN=xpaC P... 30 8.6
sp|Q9TW65|DMD_CAEEL Dystrophin-1 OS=Caenorhabditis elegans GN=dy... 30 8.6
sp|Q2TAC2|CCD57_HUMAN Coiled-coil domain-containing protein 57 O... 30 8.6

>sp|Q6ZNQ3|LRC69_HUMAN Leucine-rich repeat-containing protein 69
OS=Homo sapiens GN=LRRC69 PE=2 SV=2
Length = 347

Score = 32.7 bits (73), Expect = 1.0
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = -1

Query: 332 FSPYFCTGVSNLLLIILTSSPLHVLPERFKRLLIMFNNSIEFN 204
F+P C G+ NL+L+ L ++ L LP+ RL + SI +N
Sbjct: 98 FAPGACDGLQNLILLNLNNNHLTQLPQEVSRLKSLTYMSINYN 140


>sp|Q58718|RAD50_METJA DNA double-strand break repair rad50 ATPase
OS=Methanocaldococcus jannaschii GN=rad50 PE=3 SV=1
Length = 1005

Score = 31.2 bits (69), Expect = 2.9
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Frame = +3

Query: 201 YIKLNGVIEHNKKPFESLRKDMERARCKDDEKKIAHTCAKVRREYALHHKKRNRMLHTFR 380
Y+KL +E K E L++ + +++ +DD + K++ E ++ +L +
Sbjct: 313 YLKLTKQLEIIKGDIEKLKEFINKSKYRDDIDNLDTLLNKIKDEIERVETIKD-LLEELK 371

Query: 381 ILHEEL------KAIKTRCKEYAEK 437
L+EE+ K I CKEY EK
Sbjct: 372 NLNEEIEKIEKYKRICEECKEYYEK 396


>sp|Q8NF91|SYNE1_HUMAN Nesprin-1 OS=Homo sapiens GN=SYNE1 PE=1 SV=2
Length = 8797

Score = 30.8 bits (68), Expect = 3.9
Identities = 26/74 (35%), Positives = 34/74 (45%)
Frame = +3

Query: 222 IEHNKKPFESLRKDMERARCKDDEKKIAHTCAKVRREYALHHKKRNRMLHTFRILHEELK 401
+E KK L KD E+ EK IA + K+R KK ++ L HEEL
Sbjct: 7661 LEEQKKKLAFLLKDWEKC-----EKGIADSLEKLRT----FKKKLSQSLPDH---HEELH 7708

Query: 402 AIKTRCKEYAEKMG 443
A + RCKE +G
Sbjct: 7709 AEQMRCKELENAVG 7722


>sp|P32380|NUF1_YEAST Protein NUF1 OS=Saccharomyces cerevisiae
GN=NUF1 PE=1 SV=1
Length = 944

Score = 30.8 bits (68), Expect = 3.9
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 13/87 (14%)
Frame = +3

Query: 225 EHNKKPFESLRKDME--RARCKDDEKKIAHTCAKVRREYALHHKKRNR-----------M 365
E+ +K ESLRKD+E + KD E KI ++ A +KR++ +
Sbjct: 547 ENYEKQLESLRKDIEEYKESAKDSEDKIEELKIRIAENSAKVSEKRSKDIKQKDEQISDL 606

Query: 366 LHTFRILHEELKAIKTRCKEYAEKMGQ 446
++ +E+ ++K+ Y + Q
Sbjct: 607 TQNLKLQEDEISSLKSIIDRYKKDFNQ 633


>sp|P44898|Y841_HAEIN Uncharacterized protein HI0841 OS=Haemophilus
influenzae GN=HI0841 PE=4 SV=1
Length = 585

Score = 30.4 bits (67), Expect = 5.0
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -2

Query: 220 TPLSLIYTGYFSRYSLQYSLYSWNVLINP 134
T L L T F+R++L S WN+L+NP
Sbjct: 104 TTLLLFDTAVFNRFNLHLSSVVWNLLVNP 132


>sp|Q8MET5|MATK_EUCUL Maturase K OS=Eucommia ulmoides GN=matK PE=3
SV=1
Length = 509

Score = 30.4 bits (67), Expect = 5.0
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = -2

Query: 169 YSLYSWNVLINPRRSASFFS 110
Y ++WN LI P++S+SFFS
Sbjct: 185 YQSHNWNSLITPKKSSSFFS 204


>sp|Q479R3|HEM1_DECAR Glutamyl-tRNA reductase OS=Dechloromonas
aromatica (strain RCB) GN=hemA PE=3 SV=1
Length = 416

Score = 30.4 bits (67), Expect = 5.0
Identities = 22/69 (31%), Positives = 31/69 (44%)
Frame = +3

Query: 303 AHTCAKVRREYALHHKKRNRMLHTFRILHEELKAIKTRCKEYAEKMGQG*V*RVDLLESC 482
AH CA ++ + NR L R L E+ R E E + Q D++ SC
Sbjct: 194 AHFCAGKPKQVTI----ANRTLERGRALAEQYGGTAIRLDELGEHLAQH-----DIVVSC 244

Query: 483 TSSSLPL*G 509
T+S LP+ G
Sbjct: 245 TASPLPIIG 253


>sp|Q1DU03|SET2_COCIM Histone-lysine N-methyltransferase, H3
lysine-36 specific OS=Coccidioides immitis GN=SET2 PE=3
SV=1
Length = 1003

Score = 30.0 bits (66), Expect = 6.6
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +3

Query: 282 KDDEKKIAHTCAK--VRREYALHHKKRNRMLHTFRILHEELKAIKTRCKEYAEK 437
KDD K+ A AK V ++ K NR+ +I +++K +K CKEY +K
Sbjct: 720 KDDLKRYAKEVAKKLVNSDF-----KNNRVEDPTKISDKQVKQVKKYCKEYFDK 768


>sp|O20672|CYB_TOXGO Cytochrome b OS=Toxoplasma gondii GN=MT-CYB
PE=2 SV=1
Length = 368

Score = 30.0 bits (66), Expect = 6.6
Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 21/90 (23%)
Frame = -1

Query: 458 LHSTLPHFLCVLLA--------------SGLDCLEFLMQYP-------KCMKHTISLLVV 342
LH LP C+++ +G+D + YP KC+ + I L+ +
Sbjct: 177 LHFILPFIGCIIIVLHIFYLHLNGSSNPAGIDTALKVAFYPHMLMTDAKCLSYLIGLIFL 236

Query: 341 QSIFSPYFCTGVSNLLLIILTSSPLHVLPE 252
Q+ F + N + + +PLH++PE
Sbjct: 237 QAAFGLMELSHPDNSIPVNRFVTPLHIVPE 266


>sp|P37467|XPAC_BACSU Protein xpaC OS=Bacillus subtilis GN=xpaC PE=4
SV=1
Length = 204

Score = 29.6 bits (65), Expect = 8.6
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +3

Query: 201 YIKLNGVIEHNKKPFESLRKDMERARCKDDEKKIAHTCAKVRREYALHHKKRNRMLHTFR 380
YIK N +E ++ LRK + +A+ K+ A VRR Y L K+ R R
Sbjct: 72 YIKKN--LEEARQKMVRLRKALFQAKSIQMFKQNAEMLRIVRRIYLLTKKEPKRFYQAER 129

Query: 381 ILHEELKAIKTRCKEYA 431
++ L ++ ++YA
Sbjct: 130 FFYQTLDSVVELTEKYA 146


tr_hit_id A7P6U5
Definition tr|A7P6U5|A7P6U5_VITVI Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera
Align length 133
Score (bit) 62.8
E-value 9.0e-09
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920208|Adiantum capillus-veneris mRNA, clone:
YMU001_000134_C11.
(509 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7P6U5|A7P6U5_VITVI Chromosome chr9 scaffold_7, whole genome ... 63 9e-09
tr|A5APE0|A5APE0_VITVI Putative uncharacterized protein OS=Vitis... 63 9e-09
tr|Q10QQ9|Q10QQ9_ORYSJ Os03g0187100 protein OS=Oryza sativa subs... 56 1e-06
tr|A3AEX5|A3AEX5_ORYSJ Putative uncharacterized protein OS=Oryza... 56 1e-06
tr|Q94BS1|Q94BS1_ARATH Putative uncharacterized protein At3g2129... 53 7e-06
tr|A8ZUZ7|A8ZUZ7_DESOH Putative uncharacterized protein OS=Desul... 35 2.7
tr|A2FBW6|A2FBW6_TRIVA SMC family, C-terminal domain containing ... 34 3.6
tr|B1KFB7|B1KFB7_SHEWM Putative uncharacterized protein OS=Shewa... 34 4.7
tr|A9T0Q8|A9T0Q8_PHYPA Predicted protein (Fragment) OS=Physcomit... 33 6.1
tr|A8XAX0|A8XAX0_CAEBR Putative uncharacterized protein OS=Caeno... 33 6.1
tr|A8PLG8|A8PLG8_BRUMA Putative uncharacterized protein OS=Brugi... 33 6.1
tr|A8NZC0|A8NZC0_BRUMA Zinc finger in N-recognin family protein ... 33 6.1
tr|A8NP85|A8NP85_BRUMA Putative uncharacterized protein (Fragmen... 33 6.1
tr|A3LRG9|A3LRG9_PICST 12-oxophytodienoate reductase 1 (12-oxoph... 33 6.1
tr|Q0UIF5|Q0UIF5_PHANO Putative uncharacterized protein OS=Phaeo... 33 8.0

>tr|A7P6U5|A7P6U5_VITVI Chromosome chr9 scaffold_7, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00034205001
PE=4 SV=1
Length = 1094

Score = 62.8 bits (151), Expect = 9e-09
Identities = 41/133 (30%), Positives = 66/133 (49%)
Frame = +3

Query: 33 DSLDNSERLSPHSADEIDGSEFFAPYEKKEADLRGLINTFHXXXXXXXXXXXXXPVYIKL 212
DS +N + S+DE S ++ YEK+E +L+G I F Y L
Sbjct: 959 DSSNNGRKRRESSSDENSCS--YSKYEKEEPELKGPIKDFSQYKEYVQEYHEKYDSYNSL 1016

Query: 213 NGVIEHNKKPFESLRKDMERARCKDDEKKIAHTCAKVRREYALHHKKRNRMLHTFRILHE 392
N ++E + F L KD+E A+ +D E+ + +++ Y+ + R+ F +LHE
Sbjct: 1017 NKILESYRNEFHKLGKDLEVAKGRDLERYY-NILEQLKDTYSQCSTRHKRLKKIFVVLHE 1075

Query: 393 ELKAIKTRCKEYA 431
ELK +K R K+YA
Sbjct: 1076 ELKNLKQRIKDYA 1088


>tr|A5APE0|A5APE0_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_043643 PE=4 SV=1
Length = 1332

Score = 62.8 bits (151), Expect = 9e-09
Identities = 41/133 (30%), Positives = 66/133 (49%)
Frame = +3

Query: 33 DSLDNSERLSPHSADEIDGSEFFAPYEKKEADLRGLINTFHXXXXXXXXXXXXXPVYIKL 212
DS +N + S+DE S ++ YEK+E +L+G I F Y L
Sbjct: 1197 DSSNNGRKRRESSSDENSCS--YSKYEKEEPELKGPIKDFSQYKEYVQEYHEKYDSYNSL 1254

Query: 213 NGVIEHNKKPFESLRKDMERARCKDDEKKIAHTCAKVRREYALHHKKRNRMLHTFRILHE 392
N ++E + F L KD+E A+ +D E+ + +++ Y+ + R+ F +LHE
Sbjct: 1255 NKILESYRNEFHKLGKDLEVAKGRDLERYY-NILEQLKDTYSQCSTRHKRLKKIFVVLHE 1313

Query: 393 ELKAIKTRCKEYA 431
ELK +K R K+YA
Sbjct: 1314 ELKNLKQRIKDYA 1326


>tr|Q10QQ9|Q10QQ9_ORYSJ Os03g0187100 protein OS=Oryza sativa subsp.
japonica GN=Os03g0187100 PE=4 SV=1
Length = 1178

Score = 55.8 bits (133), Expect = 1e-06
Identities = 36/138 (26%), Positives = 63/138 (45%)
Frame = +3

Query: 21 SRAGDSLDNSERLSPHSADEIDGSEFFAPYEKKEADLRGLINTFHXXXXXXXXXXXXXPV 200
SR ++N + + + FF+ Y+K+E +L+G I F V
Sbjct: 1037 SRNNSLIENDASRKRRDSSSDEDNLFFSKYDKEEPELKGPIKDFSQYKDYVQEYTEKYKV 1096

Query: 201 YIKLNGVIEHNKKPFESLRKDMERARCKDDEKKIAHTCAKVRREYALHHKKRNRMLHTFR 380
Y LN IE + F +++D+ A+ + D+ + ++R Y + M F
Sbjct: 1097 YSYLNIQIEKTRSEFLKVQEDLNVAK-ERDKDLYYNIMERIRDMYHESGTRHKLMKKVFS 1155

Query: 381 ILHEELKAIKTRCKEYAE 434
+LHEEL+ IK R K++A+
Sbjct: 1156 LLHEELQTIKRRIKDFAD 1173


>tr|A3AEX5|A3AEX5_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_009347 PE=4 SV=1
Length = 1162

Score = 55.8 bits (133), Expect = 1e-06
Identities = 36/138 (26%), Positives = 63/138 (45%)
Frame = +3

Query: 21 SRAGDSLDNSERLSPHSADEIDGSEFFAPYEKKEADLRGLINTFHXXXXXXXXXXXXXPV 200
SR ++N + + + FF+ Y+K+E +L+G I F V
Sbjct: 1021 SRNNSLIENDASRKRRDSSSDEDNLFFSKYDKEEPELKGPIKDFSQYKDYVQEYTEKYKV 1080

Query: 201 YIKLNGVIEHNKKPFESLRKDMERARCKDDEKKIAHTCAKVRREYALHHKKRNRMLHTFR 380
Y LN IE + F +++D+ A+ + D+ + ++R Y + M F
Sbjct: 1081 YSYLNIQIEKTRSEFLKVQEDLNVAK-ERDKDLYYNIMERIRDMYHESGTRHKLMKKVFS 1139

Query: 381 ILHEELKAIKTRCKEYAE 434
+LHEEL+ IK R K++A+
Sbjct: 1140 LLHEELQTIKRRIKDFAD 1157


>tr|Q94BS1|Q94BS1_ARATH Putative uncharacterized protein At3g21290
OS=Arabidopsis thaliana GN=At3g21290 PE=2 SV=1
Length = 1192

Score = 53.1 bits (126), Expect = 7e-06
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 2/118 (1%)
Frame = +3

Query: 99 FAPYEKKEADLRGLINTFHXXXXXXXXXXXXXPVYIKLNGVIEHNKKPFESLRKDMERAR 278
+ YEK +L+G I+ Y +N ++E ++ F+ L +D+ A+
Sbjct: 1077 YLKYEKASPELKGPISDHLQYKAYMQEYNDKYDSYHSINKILESHRNDFQKLGQDLGFAK 1136

Query: 279 CKDDEK--KIAHTCAKVRREYALHHKKRNRMLHTFRILHEELKAIKTRCKEYAEKMGQ 446
+D E+ KI +++ Y + ++ R+ F +LHEELK +K R ++YA G+
Sbjct: 1137 GRDVERYNKIVE---QIKESYCKYGERHKRLKKVFVVLHEELKHLKQRMRDYASSHGK 1191


>tr|A8ZUZ7|A8ZUZ7_DESOH Putative uncharacterized protein
OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3)
GN=Dole_2283 PE=4 SV=1
Length = 185

Score = 34.7 bits (78), Expect = 2.7
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +3

Query: 246 ESLRKDMERARCKDDE----KKIAHTCAKVRREYALHHKKRNRMLHTFRILHEELKAIKT 413
+S++K+ E + + E K+ A T K+ +H+K R F HE KA +
Sbjct: 103 QSIQKEFEALKAEQAELIRLKEAADTPDKIEN----YHRKMERFQERFDAFHERRKAFEK 158

Query: 414 RCKEYAEKMGQ 446
+EY EK+ Q
Sbjct: 159 EAREYNEKVRQ 169


>tr|A2FBW6|A2FBW6_TRIVA SMC family, C-terminal domain containing
protein OS=Trichomonas vaginalis G3 GN=TVAG_162180 PE=4
SV=1
Length = 1118

Score = 34.3 bits (77), Expect = 3.6
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +3

Query: 225 EHNKKPFESLRKDMERARCKDDEKKIAHTCAKVRREYALHHKKRNRMLHTFRILHEELKA 404
E+NKK FE LR+++ + + K R EY KK ++ + F L E+K
Sbjct: 238 ENNKKDFEKLREEL--SNYNEAAKNSDEAINAARHEYKETQKKMKKLQNNFDSLENEIKI 295

Query: 405 IKTRCKEYAEKMGQ 446
+ + +E K+ +
Sbjct: 296 TQNKEEELNSKLSK 309


>tr|B1KFB7|B1KFB7_SHEWM Putative uncharacterized protein
OS=Shewanella woodyi (strain ATCC 51908 / MS32)
GN=Swoo_2379 PE=3 SV=1
Length = 312

Score = 33.9 bits (76), Expect = 4.7
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +3

Query: 306 HTCAKVRREYALHHKKRNRMLHTFRILHEELKAIK 410
HT K+ R +A+H RN+ LH +R+L+E LK+I+
Sbjct: 98 HTNKKLGRSFAIH-VYRNQPLHVYRVLNEALKSIQ 131


>tr|A9T0Q8|A9T0Q8_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_17638 PE=4 SV=1
Length = 183

Score = 33.5 bits (75), Expect = 6.1
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = -2

Query: 436 FSAYSLHLVLIALSSSCSIRNV*SIRFRFLWCRAYSRLTFAQV*AIFFSSSLHLARSMSF 257
F A+S+ L+ +S C +R + S FLWC+ Y ++ ++ + H SMS
Sbjct: 95 FGAFSVKLMFCMQASGCGLRLISS----FLWCQMYRLRAISEALSLQERAEFHGRNSMSS 150

Query: 256 LR 251
LR
Sbjct: 151 LR 152


>tr|A8XAX0|A8XAX0_CAEBR Putative uncharacterized protein
OS=Caenorhabditis briggsae GN=CBG10486 PE=4 SV=1
Length = 425

Score = 33.5 bits (75), Expect = 6.1
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = +3

Query: 207 KLNGVIEHNKKPFESLRKDMERARCKDD---EKKIAHTCAKVRREY-ALHHKKRNRMLHT 374
+++ I+ +KK ES+R+ E A ++ +++ R+E ALH K N
Sbjct: 117 EIDDSIKEHKKNVESIREQSENALRQNQVIHRRQLESMDDNQRKEREALHEKLENAKKEI 176

Query: 375 FRILHEELKAIKTRCKEYAEK 437
++L +E + I R EY EK
Sbjct: 177 AKVLDDEYREIDIRMNEYLEK 197