BP920208 |
Clone id |
YMU001_000134_C11 |
Library |
YMU01 |
Length |
509 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000134_C11. |
Accession |
BP920208 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3276Contig1 |
Sequence |
GAGATATTACCTGCAGGTACTCCAGAGCCGGAGATTCCTTGGATAATTCCGAGAGACTAT CTCCTCATTCTGCAGATGAGATAGACGGATCTGAGTTTTTTGCGCCTTACGAGAAAAAGG AGGCAGATCTGCGAGGATTAATCAATACGTTCCACGAGTACAAGGAGTATTGCAAGGAGT ACCGCGAAAAGTACCCTGTATATATTAAACTCAATGGAGTTATTGAACATAATAAGAAGC CTTTTGAATCTCTCAGGAAGGACATGGAGCGGGCTAGATGTAAGGATGATGAGAAGAAGA TTGCTCACACCTGTGCAAAAGTAAGGCGAGAATATGCTCTGCACCACAAGAAGCGAAATC GTATGCTTCATACATTTCGGATACTGCATGAGGAACTCAAGGCAATCAAGACCAGATGCA AGGAGTACGCAGAGAAAATGGGGCAAGGTTGAGTGTAAAGAGTGGATCTATTGGAAAGCT GTACCTCTTCCAGTTTGCCTTTATAAGGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6ZNQ3 |
Definition |
sp|Q6ZNQ3|LRC69_HUMAN Leucine-rich repeat-containing protein 69 OS=Homo sapiens |
Align length |
43 |
Score (bit) |
32.7 |
E-value |
1.0 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7P6U5 |
Definition |
tr|A7P6U5|A7P6U5_VITVI Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
133 |
Score (bit) |
62.8 |
E-value |
9.0e-09 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920208|Adiantum capillus-veneris mRNA, clone: YMU001_000134_C11. (509 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7P6U5|A7P6U5_VITVI Chromosome chr9 scaffold_7, whole genome ... 63 9e-09 tr|A5APE0|A5APE0_VITVI Putative uncharacterized protein OS=Vitis... 63 9e-09 tr|Q10QQ9|Q10QQ9_ORYSJ Os03g0187100 protein OS=Oryza sativa subs... 56 1e-06 tr|A3AEX5|A3AEX5_ORYSJ Putative uncharacterized protein OS=Oryza... 56 1e-06 tr|Q94BS1|Q94BS1_ARATH Putative uncharacterized protein At3g2129... 53 7e-06 tr|A8ZUZ7|A8ZUZ7_DESOH Putative uncharacterized protein OS=Desul... 35 2.7 tr|A2FBW6|A2FBW6_TRIVA SMC family, C-terminal domain containing ... 34 3.6 tr|B1KFB7|B1KFB7_SHEWM Putative uncharacterized protein OS=Shewa... 34 4.7 tr|A9T0Q8|A9T0Q8_PHYPA Predicted protein (Fragment) OS=Physcomit... 33 6.1 tr|A8XAX0|A8XAX0_CAEBR Putative uncharacterized protein OS=Caeno... 33 6.1 tr|A8PLG8|A8PLG8_BRUMA Putative uncharacterized protein OS=Brugi... 33 6.1 tr|A8NZC0|A8NZC0_BRUMA Zinc finger in N-recognin family protein ... 33 6.1 tr|A8NP85|A8NP85_BRUMA Putative uncharacterized protein (Fragmen... 33 6.1 tr|A3LRG9|A3LRG9_PICST 12-oxophytodienoate reductase 1 (12-oxoph... 33 6.1 tr|Q0UIF5|Q0UIF5_PHANO Putative uncharacterized protein OS=Phaeo... 33 8.0
>tr|A7P6U5|A7P6U5_VITVI Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034205001 PE=4 SV=1 Length = 1094
Score = 62.8 bits (151), Expect = 9e-09 Identities = 41/133 (30%), Positives = 66/133 (49%) Frame = +3
Query: 33 DSLDNSERLSPHSADEIDGSEFFAPYEKKEADLRGLINTFHXXXXXXXXXXXXXPVYIKL 212 DS +N + S+DE S ++ YEK+E +L+G I F Y L Sbjct: 959 DSSNNGRKRRESSSDENSCS--YSKYEKEEPELKGPIKDFSQYKEYVQEYHEKYDSYNSL 1016
Query: 213 NGVIEHNKKPFESLRKDMERARCKDDEKKIAHTCAKVRREYALHHKKRNRMLHTFRILHE 392 N ++E + F L KD+E A+ +D E+ + +++ Y+ + R+ F +LHE Sbjct: 1017 NKILESYRNEFHKLGKDLEVAKGRDLERYY-NILEQLKDTYSQCSTRHKRLKKIFVVLHE 1075
Query: 393 ELKAIKTRCKEYA 431 ELK +K R K+YA Sbjct: 1076 ELKNLKQRIKDYA 1088
>tr|A5APE0|A5APE0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043643 PE=4 SV=1 Length = 1332
Score = 62.8 bits (151), Expect = 9e-09 Identities = 41/133 (30%), Positives = 66/133 (49%) Frame = +3
Query: 33 DSLDNSERLSPHSADEIDGSEFFAPYEKKEADLRGLINTFHXXXXXXXXXXXXXPVYIKL 212 DS +N + S+DE S ++ YEK+E +L+G I F Y L Sbjct: 1197 DSSNNGRKRRESSSDENSCS--YSKYEKEEPELKGPIKDFSQYKEYVQEYHEKYDSYNSL 1254
Query: 213 NGVIEHNKKPFESLRKDMERARCKDDEKKIAHTCAKVRREYALHHKKRNRMLHTFRILHE 392 N ++E + F L KD+E A+ +D E+ + +++ Y+ + R+ F +LHE Sbjct: 1255 NKILESYRNEFHKLGKDLEVAKGRDLERYY-NILEQLKDTYSQCSTRHKRLKKIFVVLHE 1313
Query: 393 ELKAIKTRCKEYA 431 ELK +K R K+YA Sbjct: 1314 ELKNLKQRIKDYA 1326
>tr|Q10QQ9|Q10QQ9_ORYSJ Os03g0187100 protein OS=Oryza sativa subsp. japonica GN=Os03g0187100 PE=4 SV=1 Length = 1178
Score = 55.8 bits (133), Expect = 1e-06 Identities = 36/138 (26%), Positives = 63/138 (45%) Frame = +3
Query: 21 SRAGDSLDNSERLSPHSADEIDGSEFFAPYEKKEADLRGLINTFHXXXXXXXXXXXXXPV 200 SR ++N + + + FF+ Y+K+E +L+G I F V Sbjct: 1037 SRNNSLIENDASRKRRDSSSDEDNLFFSKYDKEEPELKGPIKDFSQYKDYVQEYTEKYKV 1096
Query: 201 YIKLNGVIEHNKKPFESLRKDMERARCKDDEKKIAHTCAKVRREYALHHKKRNRMLHTFR 380 Y LN IE + F +++D+ A+ + D+ + ++R Y + M F Sbjct: 1097 YSYLNIQIEKTRSEFLKVQEDLNVAK-ERDKDLYYNIMERIRDMYHESGTRHKLMKKVFS 1155
Query: 381 ILHEELKAIKTRCKEYAE 434 +LHEEL+ IK R K++A+ Sbjct: 1156 LLHEELQTIKRRIKDFAD 1173
>tr|A3AEX5|A3AEX5_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_009347 PE=4 SV=1 Length = 1162
Score = 55.8 bits (133), Expect = 1e-06 Identities = 36/138 (26%), Positives = 63/138 (45%) Frame = +3
Query: 21 SRAGDSLDNSERLSPHSADEIDGSEFFAPYEKKEADLRGLINTFHXXXXXXXXXXXXXPV 200 SR ++N + + + FF+ Y+K+E +L+G I F V Sbjct: 1021 SRNNSLIENDASRKRRDSSSDEDNLFFSKYDKEEPELKGPIKDFSQYKDYVQEYTEKYKV 1080
Query: 201 YIKLNGVIEHNKKPFESLRKDMERARCKDDEKKIAHTCAKVRREYALHHKKRNRMLHTFR 380 Y LN IE + F +++D+ A+ + D+ + ++R Y + M F Sbjct: 1081 YSYLNIQIEKTRSEFLKVQEDLNVAK-ERDKDLYYNIMERIRDMYHESGTRHKLMKKVFS 1139
Query: 381 ILHEELKAIKTRCKEYAE 434 +LHEEL+ IK R K++A+ Sbjct: 1140 LLHEELQTIKRRIKDFAD 1157
>tr|Q94BS1|Q94BS1_ARATH Putative uncharacterized protein At3g21290 OS=Arabidopsis thaliana GN=At3g21290 PE=2 SV=1 Length = 1192
Score = 53.1 bits (126), Expect = 7e-06 Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 2/118 (1%) Frame = +3
Query: 99 FAPYEKKEADLRGLINTFHXXXXXXXXXXXXXPVYIKLNGVIEHNKKPFESLRKDMERAR 278 + YEK +L+G I+ Y +N ++E ++ F+ L +D+ A+ Sbjct: 1077 YLKYEKASPELKGPISDHLQYKAYMQEYNDKYDSYHSINKILESHRNDFQKLGQDLGFAK 1136
Query: 279 CKDDEK--KIAHTCAKVRREYALHHKKRNRMLHTFRILHEELKAIKTRCKEYAEKMGQ 446 +D E+ KI +++ Y + ++ R+ F +LHEELK +K R ++YA G+ Sbjct: 1137 GRDVERYNKIVE---QIKESYCKYGERHKRLKKVFVVLHEELKHLKQRMRDYASSHGK 1191
>tr|A8ZUZ7|A8ZUZ7_DESOH Putative uncharacterized protein OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=Dole_2283 PE=4 SV=1 Length = 185
Score = 34.7 bits (78), Expect = 2.7 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 4/71 (5%) Frame = +3
Query: 246 ESLRKDMERARCKDDE----KKIAHTCAKVRREYALHHKKRNRMLHTFRILHEELKAIKT 413 +S++K+ E + + E K+ A T K+ +H+K R F HE KA + Sbjct: 103 QSIQKEFEALKAEQAELIRLKEAADTPDKIEN----YHRKMERFQERFDAFHERRKAFEK 158
Query: 414 RCKEYAEKMGQ 446 +EY EK+ Q Sbjct: 159 EAREYNEKVRQ 169
>tr|A2FBW6|A2FBW6_TRIVA SMC family, C-terminal domain containing protein OS=Trichomonas vaginalis G3 GN=TVAG_162180 PE=4 SV=1 Length = 1118
Score = 34.3 bits (77), Expect = 3.6 Identities = 20/74 (27%), Positives = 35/74 (47%) Frame = +3
Query: 225 EHNKKPFESLRKDMERARCKDDEKKIAHTCAKVRREYALHHKKRNRMLHTFRILHEELKA 404 E+NKK FE LR+++ + + K R EY KK ++ + F L E+K Sbjct: 238 ENNKKDFEKLREEL--SNYNEAAKNSDEAINAARHEYKETQKKMKKLQNNFDSLENEIKI 295
Query: 405 IKTRCKEYAEKMGQ 446 + + +E K+ + Sbjct: 296 TQNKEEELNSKLSK 309
>tr|B1KFB7|B1KFB7_SHEWM Putative uncharacterized protein OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=Swoo_2379 PE=3 SV=1 Length = 312
Score = 33.9 bits (76), Expect = 4.7 Identities = 16/35 (45%), Positives = 25/35 (71%) Frame = +3
Query: 306 HTCAKVRREYALHHKKRNRMLHTFRILHEELKAIK 410 HT K+ R +A+H RN+ LH +R+L+E LK+I+ Sbjct: 98 HTNKKLGRSFAIH-VYRNQPLHVYRVLNEALKSIQ 131
>tr|A9T0Q8|A9T0Q8_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_17638 PE=4 SV=1 Length = 183
Score = 33.5 bits (75), Expect = 6.1 Identities = 19/62 (30%), Positives = 31/62 (50%) Frame = -2
Query: 436 FSAYSLHLVLIALSSSCSIRNV*SIRFRFLWCRAYSRLTFAQV*AIFFSSSLHLARSMSF 257 F A+S+ L+ +S C +R + S FLWC+ Y ++ ++ + H SMS Sbjct: 95 FGAFSVKLMFCMQASGCGLRLISS----FLWCQMYRLRAISEALSLQERAEFHGRNSMSS 150
Query: 256 LR 251 LR Sbjct: 151 LR 152
>tr|A8XAX0|A8XAX0_CAEBR Putative uncharacterized protein OS=Caenorhabditis briggsae GN=CBG10486 PE=4 SV=1 Length = 425
Score = 33.5 bits (75), Expect = 6.1 Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 4/81 (4%) Frame = +3
Query: 207 KLNGVIEHNKKPFESLRKDMERARCKDD---EKKIAHTCAKVRREY-ALHHKKRNRMLHT 374 +++ I+ +KK ES+R+ E A ++ +++ R+E ALH K N Sbjct: 117 EIDDSIKEHKKNVESIREQSENALRQNQVIHRRQLESMDDNQRKEREALHEKLENAKKEI 176
Query: 375 FRILHEELKAIKTRCKEYAEK 437 ++L +E + I R EY EK Sbjct: 177 AKVLDDEYREIDIRMNEYLEK 197
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