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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920217
Clone id YMU001_000134_D08
Library
Length 465
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000134_D08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CTGACACGAAAGGTCAGGAGAGCCAGTAAAGAGTTTGATGGTGCCCGTTAGGGTTTTCAC
CATGTAGGCTTTACCTATTCTCTCTCCTTCCTTTGGTCCTGGCATCCTGGGATAATTAAG
CCAATTTGGCTTCTTTTCTGCAATCCTTCCATGCTCTTTCCAGTTTCTGACTCTTGGCAC
CGGGCAGAAGGTTGCATCCTCCCGAATCTCCTTTGGAGCCTCTACCAAGTAGATGAGGTA
GGCTGGGTATTTGTTCAGCCAACCTTTCCTCCATCTAGGTTGAGAATCTACAATCTTCTT
TGATTGTTCATCCTTTGTGATGTCGCCTTCATAAAGAGCGACATACTGCTCCTCCTCTAT
TCTCTTTTTCGTCTTTATCACTTCAAATTTCATCAGAGGGAAAGGCAGGCTGGGTGTCTA
AACCTTGAAGTCTAATGGAGATGAGGAGTCTCCTTTCCCATTCCA
■■Homology search results ■■ -
sp_hit_id Q1QTE5
Definition sp|Q1QTE5|AMPA_CHRSD Probable cytosol aminopeptidase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768)
Align length 40
Score (bit) 32.3
E-value 1.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920217|Adiantum capillus-veneris mRNA, clone:
YMU001_000134_D08.
         (465 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q1QTE5|AMPA_CHRSD Probable cytosol aminopeptidase OS=Chromoha...    32   1.0  
sp|Q60767|LY75_MOUSE Lymphocyte antigen 75 OS=Mus musculus GN=Ly...    31   2.3  
sp|A8EZN9|ENGA_RICCK GTP-binding protein engA OS=Rickettsia cana...    31   2.3  
sp|P00730|CBPA1_BOVIN Carboxypeptidase A1 OS=Bos taurus GN=CPA1 ...    31   3.1  
sp|Q08287|NOP8_YEAST 60S ribosome subunit biogenesis protein NOP...    30   6.8  
sp|A5VME2|GAL1_LACRD Galactokinase OS=Lactobacillus reuteri (str...    30   6.8  

>sp|Q1QTE5|AMPA_CHRSD Probable cytosol aminopeptidase
           OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC
           BAA-138 / NCIMB 13768) GN=pepA PE=3 SV=1
          Length = 507

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -3

Query: 274 MEERLAEQIPSLPHLL-GRGSKGDSGGCNLLPGAKSQKLE 158
           ME R AE     PH+L G+G   DSGG +L PGA   +++
Sbjct: 251 MEYRGAEDPEEAPHILVGKGITFDSGGISLKPGAGMDEMK 290


>sp|Q60767|LY75_MOUSE Lymphocyte antigen 75 OS=Mus musculus GN=Ly75
           PE=1 SV=1
          Length = 1723

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 21/68 (30%), Positives = 33/68 (48%)
 Frame = -1

Query: 417 TPSLPFPLMKFEVIKTKKRIEEEQYVALYEGDITKDEQSKKIVDSQPRWRKGWLNKYPAY 238
           TP+    L K    K +   ++ +YV   +G+ITKD +S K+      W++   +    Y
Sbjct: 459 TPNCVSYLGKLGQWKVQSCEKKLRYVCKKKGEITKDAESDKLCPPDEGWKR---HGETCY 515

Query: 237 LIYLVEAP 214
            IY  EAP
Sbjct: 516 KIYEKEAP 523


>sp|A8EZN9|ENGA_RICCK GTP-binding protein engA OS=Rickettsia
           canadensis (strain McKiel) GN=engA PE=3 SV=1
          Length = 447

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 7/59 (11%)
 Frame = -1

Query: 168 RNWKEHGRIAEKKPN-WLNYPR----MPGPKEGERIGKAYM--VKTLTGTIKLFTGSPD 13
           +NW +  +I   K N WLN+      +P  K G+R+   YM  +KT   T KLF+ +P+
Sbjct: 354 KNWNK--KITTSKLNEWLNFTTEAHPLPLQKGGKRVRIKYMTQIKTRPPTFKLFSNNPE 410


>sp|P00730|CBPA1_BOVIN Carboxypeptidase A1 OS=Bos taurus GN=CPA1
           PE=1 SV=3
          Length = 419

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 23/76 (30%), Positives = 32/76 (42%)
 Frame = -1

Query: 465 WNGKGDSSSPLDFKV*TPSLPFPLMKFEVIKTKKRIEEEQYVALYEGDITKDEQSKKIVD 286
           W G G   SP+D +V  PSL    +  E    + RI  E   +L       DE+ +++  
Sbjct: 53  WRGPGQPGSPIDVRVPFPSLQAVKVFLEAHGIRYRIMIEDVQSLL------DEEQEQMFA 106

Query: 285 SQPRWRKGWLNKYPAY 238
           SQ R R      Y  Y
Sbjct: 107 SQSRARSTNTFNYATY 122


>sp|Q08287|NOP8_YEAST 60S ribosome subunit biogenesis protein NOP8
           OS=Saccharomyces cerevisiae GN=NOP8 PE=1 SV=1
          Length = 484

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 15/89 (16%), Positives = 38/89 (42%)
 Frame = -1

Query: 297 KIVDSQPRWRKGWLNKYPAYLIYLVEAPKEIREDATFCPVPRVRNWKEHGRIAEKKPNWL 118
           K+ +++P W   W           V+  K+++ED       + +NW+ + ++     +W 
Sbjct: 77  KVDEAKPNWESTWA----------VQHAKDLKEDIILNAKMKKKNWQHYKKMENVAKSWK 126

Query: 117 NYPRMPGPKEGERIGKAYMVKTLTGTIKL 31
           ++  +   +  E   K   ++ +T  I +
Sbjct: 127 DHKEVIAGRMREAPRKRSQLRNITFRINV 155


>sp|A5VME2|GAL1_LACRD Galactokinase OS=Lactobacillus reuteri (strain
           DSM 20016) GN=galK PE=3 SV=1
          Length = 392

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
 Frame = -1

Query: 354 EEQYVALYEGDITKDEQSKKIV----DSQPRWRKG--WLNKYPAYLIYL 226
           E+  VA+Y  +  K+E SK I     D++P+  K   W+N +   L+YL
Sbjct: 59  EDTTVAIYSANSAKEEDSKIITFDINDTEPQNAKDEKWVNYFKGMLVYL 107
tr_hit_id Q1B510
Definition tr|Q1B510|Q1B510_MYCSS Sulfate adenylyltransferase subunit 2 OS=Mycobacterium sp. (strain MCS)
Align length 81
Score (bit) 36.2
E-value 0.85
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920217|Adiantum capillus-veneris mRNA, clone:
YMU001_000134_D08.
         (465 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q1B510|Q1B510_MYCSS Sulfate adenylyltransferase subunit 2 OS=...    36   0.85 
tr|A1UK27|A1UK27_MYCSK Sulfate adenylyltransferase subunit 2 OS=...    36   0.85 
tr|A3Q3I2|A3Q3I2_MYCSJ Sulfate adenylyltransferase subunit 2 OS=...    35   1.4  
tr|Q73N14|Q73N14_TREDE Putative uncharacterized protein OS=Trepo...    35   2.5  
tr|B7GR93|B7GR93_BIFLO Putative uncharacterized protein OS=Bifid...    35   2.5  
tr|Q2QLN3|Q2QLN3_ORYSJ Expressed protein OS=Oryza sativa subsp. ...    34   3.2  
tr|Q0ILN7|Q0ILN7_ORYSJ Os12g0635500 protein OS=Oryza sativa subs...    34   3.2  
tr|A3CJS0|A3CJS0_ORYSJ Putative uncharacterized protein OS=Oryza...    34   3.2  
tr|A2ZN40|A2ZN40_ORYSI Putative uncharacterized protein OS=Oryza...    34   3.2  
tr|A7EAD7|A7EAD7_SCLS1 Putative uncharacterized protein OS=Scler...    34   4.2  
tr|A3EWD6|A3EWD6_9BACT Putative uncharacterized protein OS=Lepto...    33   5.5  
tr|Q815Q5|Q815Q5_BACCR Methyltransferase OS=Bacillus cereus (str...    33   7.2  
tr|A0RCF5|A0RCF5_BACAH Prolipoprotein diacylglyceryl transferase...    33   7.2  
tr|B3ZPP5|B3ZPP5_BACCE Prolipoprotein diacylglyceryl transferase...    33   7.2  
tr|B3YRU6|B3YRU6_BACCE Prolipoprotein diacylglyceryl transferase...    33   7.2  
tr|Q4S0Z1|Q4S0Z1_TETNG Chromosome 5 SCAF14773, whole genome shot...    33   9.1  
tr|Q2LEM0|Q2LEM0_9ACTO Putative uncharacterized protein OS=Strep...    33   9.4  
tr|B0M980|B0M980_9FIRM Putative uncharacterized protein OS=Anaer...    33   9.4  

>tr|Q1B510|Q1B510_MYCSS Sulfate adenylyltransferase subunit 2
           OS=Mycobacterium sp. (strain MCS) GN=Mmcs_3919 PE=4 SV=1
          Length = 309

 Score = 36.2 bits (82), Expect = 0.85
 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
 Frame = -1

Query: 408 LPFPLMKF-------EVIKTKKRIEEEQYVALYEGDITKDEQSKKIVDSQPRWRKGWLNK 250
           LPFP+M         EVI T+ R+  E  V L    + +D  + ++VD+ P       ++
Sbjct: 66  LPFPVMHVDTGHNFDEVISTRDRLVAENGVRLVVASVQEDIDAGRVVDNGP-------SR 118

Query: 249 YPAYLIYLVEAPKEIREDATF 187
            P   I L+ A +E R DA F
Sbjct: 119 NPLQTITLLRAIRENRFDAAF 139


>tr|A1UK27|A1UK27_MYCSK Sulfate adenylyltransferase subunit 2
           OS=Mycobacterium sp. (strain KMS) GN=Mkms_3993 PE=4 SV=1
          Length = 309

 Score = 36.2 bits (82), Expect = 0.85
 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
 Frame = -1

Query: 408 LPFPLMKF-------EVIKTKKRIEEEQYVALYEGDITKDEQSKKIVDSQPRWRKGWLNK 250
           LPFP+M         EVI T+ R+  E  V L    + +D  + ++VD+ P       ++
Sbjct: 66  LPFPVMHVDTGHNFDEVISTRDRLVAENGVRLVVASVQEDIDAGRVVDNGP-------SR 118

Query: 249 YPAYLIYLVEAPKEIREDATF 187
            P   I L+ A +E R DA F
Sbjct: 119 NPLQTITLLRAIRENRFDAAF 139


>tr|A3Q3I2|A3Q3I2_MYCSJ Sulfate adenylyltransferase subunit 2
           OS=Mycobacterium sp. (strain JLS) GN=Mjls_3934 PE=4 SV=1
          Length = 309

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
 Frame = -1

Query: 408 LPFPLMKF-------EVIKTKKRIEEEQYVALYEGDITKDEQSKKIVDSQPRWRKGWLNK 250
           LPFP+M         EVI T+ R+  E  V L    + +D  + ++VD+ P       ++
Sbjct: 66  LPFPVMHVDTGHNFDEVIATRDRLVAENGVRLVVASVQEDIDAGRVVDNGP-------SR 118

Query: 249 YPAYLIYLVEAPKEIREDATF 187
            P   + L+ A +E R DA F
Sbjct: 119 NPLQTVTLLRAIRENRFDAAF 139


>tr|Q73N14|Q73N14_TREDE Putative uncharacterized protein
           OS=Treponema denticola GN=TDE_1342 PE=4 SV=1
          Length = 679

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 25/105 (23%), Positives = 51/105 (48%), Gaps = 15/105 (14%)
 Frame = -1

Query: 381 VIKTKKRIEEEQYVALYEGDITKDEQSKKIVDSQPRWRKG--WLNKYPA----YLIYLVE 220
           V+ ++ R E + ++++YEG +  DE    I+DS+  ++ G  W  ++ +    Y  Y VE
Sbjct: 314 VVNSELRNELKNFLSVYEGLVVDDENGDLIIDSKIYYKNGRPWCAEFDSLQTGYPEYTVE 373

Query: 219 A---------PKEIREDATFCPVPRVRNWKEHGRIAEKKPNWLNY 112
                      K+     ++   P V+N+ ++G+    +P  LN+
Sbjct: 374 CNFGIPSVIHGKKNEYSVSYDSYPAVKNFTKNGKKYTMRPLDLNW 418


>tr|B7GR93|B7GR93_BIFLO Putative uncharacterized protein
           OS=Bifidobacterium longum subsp. infantis ATCC 15697
           GN=Blon_1235 PE=4 SV=1
          Length = 133

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
 Frame = +1

Query: 58  HHVGFTYSLSFLWSWHPGIIKPIWLLFCNPSMLFPVSDSWHRAEG----CILPNLLWSLY 225
           +H GF++  ++ W WH G++     L+ + + + P+ D+W  A G    C LP+ +   Y
Sbjct: 8   NHRGFSHPGAY-WLWHLGLLAAPIPLYLDQTGIRPIPDAWQWAAGILAFCTLPSFVLEWY 66

Query: 226 QVDEVGWVFVQ 258
                G+ F Q
Sbjct: 67  ----AGFAFEQ 73


>tr|Q2QLN3|Q2QLN3_ORYSJ Expressed protein OS=Oryza sativa subsp.
           japonica GN=LOC_Os12g43880 PE=4 SV=1
          Length = 407

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 14/108 (12%)
 Frame = -1

Query: 285 SQPRWRKG--WLNKYPAYLIYLVEAPKEIREDATFCP---------VPRVRNWKEHGRIA 139
           S  +WRKG  W     +  +++V   +        C          +P V + +  GRIA
Sbjct: 275 SPEQWRKGAQWFEVDRSLAVFVVGDERYYPRFRELCRPPCYVDEHYLPTVLSIEAAGRIA 334

Query: 138 EKKPNWLNYPR---MPGPKEGERIGKAYMVKTLTGTIKLFTGSPDLSC 4
            +   W+++ R    P    G  +G+A++ K   G   L+ G P   C
Sbjct: 335 NRSVTWVDWSRGGAHPATFGGADVGEAWVRKAAAGQRCLYNGQPSEVC 382


>tr|Q0ILN7|Q0ILN7_ORYSJ Os12g0635500 protein OS=Oryza sativa subsp.
           japonica GN=Os12g0635500 PE=4 SV=1
          Length = 401

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 14/108 (12%)
 Frame = -1

Query: 285 SQPRWRKG--WLNKYPAYLIYLVEAPKEIREDATFCP---------VPRVRNWKEHGRIA 139
           S  +WRKG  W     +  +++V   +        C          +P V + +  GRIA
Sbjct: 269 SPEQWRKGAQWFEVDRSLAVFVVGDERYYPRFRELCRPPCYVDEHYLPTVLSIEAAGRIA 328

Query: 138 EKKPNWLNYPR---MPGPKEGERIGKAYMVKTLTGTIKLFTGSPDLSC 4
            +   W+++ R    P    G  +G+A++ K   G   L+ G P   C
Sbjct: 329 NRSVTWVDWSRGGAHPATFGGADVGEAWVRKAAAGQRCLYNGQPSEVC 376


>tr|A3CJS0|A3CJS0_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_035542 PE=4 SV=1
          Length = 378

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 14/108 (12%)
 Frame = -1

Query: 285 SQPRWRKG--WLNKYPAYLIYLVEAPKEIREDATFCP---------VPRVRNWKEHGRIA 139
           S  +WRKG  W     +  +++V   +        C          +P V + +  GRIA
Sbjct: 246 SPEQWRKGAQWFEVDRSLAVFVVGDERYYPRFRELCRPPCYVDEHYLPTVLSIEAAGRIA 305

Query: 138 EKKPNWLNYPR---MPGPKEGERIGKAYMVKTLTGTIKLFTGSPDLSC 4
            +   W+++ R    P    G  +G+A++ K   G   L+ G P   C
Sbjct: 306 NRSVTWVDWSRGGAHPATFGGADVGEAWVRKAAAGQRCLYNGQPSEVC 353


>tr|A2ZN40|A2ZN40_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_39256 PE=4 SV=1
          Length = 401

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 14/108 (12%)
 Frame = -1

Query: 285 SQPRWRKG--WLNKYPAYLIYLVEAPKEIREDATFCP---------VPRVRNWKEHGRIA 139
           S  +WRKG  W     +  +++V   +        C          +P V + +  GRIA
Sbjct: 269 SPEQWRKGAQWFEVDRSLAVFVVGDERYYPRFRELCRPPCYVDEHYLPTVLSIEAAGRIA 328

Query: 138 EKKPNWLNYPR---MPGPKEGERIGKAYMVKTLTGTIKLFTGSPDLSC 4
            +   W+++ R    P    G  +G+A++ K   G   L+ G P   C
Sbjct: 329 NRSVTWVDWSRGGAHPATFGGADVGEAWVRKAAAGQRCLYNGQPSEVC 376


>tr|A7EAD7|A7EAD7_SCLS1 Putative uncharacterized protein
           OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 /
           Ss-1) GN=SS1G_02269 PE=4 SV=1
          Length = 916

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 16/49 (32%), Positives = 31/49 (63%)
 Frame = -1

Query: 279 PRWRKGWLNKYPAYLIYLVEAPKEIREDATFCPVPRVRNWKEHGRIAEK 133
           P +R+  L+ +P+++I+ V AP  ++ D+ +   P+V +W  +GR A K
Sbjct: 278 PYYRENLLSAWPSHMIFEVGAPP-VKLDSNWISNPKVADWYIYGRNARK 325