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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920221
Clone id YMU001_000134_D12
Library
Length 224
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000134_D12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TGATGAGACAAAGTTCTACGACCAAGTCGATCATTTCGACCCCATGTAGGCCCCTCCAAC
ATTCCAAGAAGCATGTTGAGACAAGGCTGCAAATATGGAATAAATTCTCGAAAAAGCAGC
TCAAACTTCCCGCTTGAAAGAGATTGAAACATTGTGCGGAGCAAAAGCATATAGCCTTGG
GGCTTATCAACTTCTGTAGCACATTTGATACACGTCTCCATAAG
■■Homology search results ■■ -
sp_hit_id Q9Y4A5
Definition sp|Q9Y4A5|TRRAP_HUMAN Transformation/transcription domain-associated protein OS=Homo sapiens
Align length 57
Score (bit) 42.0
E-value 5.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920221|Adiantum capillus-veneris mRNA, clone:
YMU001_000134_D12.
         (224 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9Y4A5|TRRAP_HUMAN Transformation/transcription domain-associ...    42   5e-05
sp|Q8I8U7|TRA1_DROME Transcription-associated protein 1 OS=Droso...    40   5e-04
sp|P38811|TRA1_YEAST Transcription-associated protein 1 OS=Sacch...    43   5e-04
sp|Q10064|YAMB_SCHPO Uncharacterized PI3/PI4-kinase family prote...    37   0.030
sp|Q12502|LDB19_YEAST Protein LDB19 OS=Saccharomyces cerevisiae ...    29   6.3  
sp|Q91820|STK6_XENLA Serine/threonine-protein kinase 6 OS=Xenopu...    29   8.2  

>sp|Q9Y4A5|TRRAP_HUMAN Transformation/transcription
           domain-associated protein OS=Homo sapiens GN=TRRAP PE=1
           SV=3
          Length = 3859

 Score = 42.0 bits (97), Expect(2) = 5e-05
 Identities = 21/57 (36%), Positives = 35/57 (61%)
 Frame = -1

Query: 224 LMETCIKCATEVDKPQGYMLLLRTMFQSLSSGKFELLFREFIPYLQPCLNMLLGMLE 54
           ++ + ++ A    +P  Y LLLR +F+S+  G  +LL++EF+P L P L   L ML+
Sbjct: 739 IVNSSMELAQTAKEPYNYFLLLRALFRSIGGGSHDLLYQEFLPLL-PNLLQGLNMLQ 794



 Score = 24.3 bits (51), Expect(2) = 5e-05
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = -2

Query: 52  GLHGVEMIDLVVELCL 5
           GLH   M DL VELCL
Sbjct: 796 GLHKQHMKDLFVELCL 811


>sp|Q8I8U7|TRA1_DROME Transcription-associated protein 1
           OS=Drosophila melanogaster GN=Nipped-A PE=1 SV=3
          Length = 3803

 Score = 40.0 bits (92), Expect(2) = 5e-04
 Identities = 18/43 (41%), Positives = 29/43 (67%)
 Frame = -1

Query: 188 DKPQGYMLLLRTMFQSLSSGKFELLFREFIPYLQPCLNMLLGM 60
           ++P  Y LLLR +F+S+  G  +LL++EF+P L    N+L G+
Sbjct: 780 EEPYNYFLLLRALFRSIGGGSHDLLYQEFLPLLP---NLLEGL 819



 Score = 22.7 bits (47), Expect(2) = 5e-04
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -2

Query: 52  GLHGVEMIDLVVELCL 5
           G H   M DL VELCL
Sbjct: 825 GFHKQHMRDLFVELCL 840


>sp|P38811|TRA1_YEAST Transcription-associated protein 1
           OS=Saccharomyces cerevisiae GN=TRA1 PE=1 SV=1
          Length = 3744

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 21/56 (37%), Positives = 33/56 (58%)
 Frame = -1

Query: 224 LMETCIKCATEVDKPQGYMLLLRTMFQSLSSGKFELLFREFIPYLQPCLNMLLGML 57
           L+   +K +T  ++P  Y  L+RT+F+S+  G+FE L+R   P LQ  L  L  M+
Sbjct: 791 LILNSLKYSTTAEEPLVYFYLIRTLFRSIGGGRFENLYRSIKPILQVLLQSLNQMI 846


>sp|Q10064|YAMB_SCHPO Uncharacterized PI3/PI4-kinase family protein
           C1F5.11c OS=Schizosaccharomyces pombe GN=SPAC1F5.11c
           PE=2 SV=1
          Length = 3655

 Score = 37.0 bits (84), Expect = 0.030
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = -1

Query: 212 CIKCATEVDKPQGYMLLLRTMFQSLSSGKFELLFREFIPYLQPCLNMLLGML 57
           C+K A        Y  LLR +F+ +  G+FE L++E +P L   L     +L
Sbjct: 704 CMKLAPNSANSLNYYYLLRALFRGIGGGRFESLYKEVMPLLHALLEAFNSLL 755


>sp|Q12502|LDB19_YEAST Protein LDB19 OS=Saccharomyces cerevisiae
           GN=LDB19 PE=1 SV=1
          Length = 818

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = -1

Query: 221 METCIKCATEVDKPQGYMLLLRTMFQSLSSGKFELLFREFIPYLQPCLNML 69
           M+TC+ C T++   + + +   T  Q LS G     F   IP   PC + L
Sbjct: 165 MQTCMNCKTKITNMKSWEIQSNT--QDLSVGSHSYPFSYLIPGSVPCSSSL 213


>sp|Q91820|STK6_XENLA Serine/threonine-protein kinase 6 OS=Xenopus
           laevis GN=aurka PE=2 SV=1
          Length = 407

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = +1

Query: 46  VGPSNIPRSMLRQGCKYGINSRKSSSNFPL 135
           +GPSN+P+ +L Q  K  ++S+K ++  PL
Sbjct: 50  LGPSNVPQRVLAQAQKPILSSQKPTTQIPL 79
tr_hit_id A9SCG8
Definition tr|A9SCG8|A9SCG8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 60
Score (bit) 100.0
E-value 3.0e-20
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920221|Adiantum capillus-veneris mRNA, clone:
YMU001_000134_D12.
         (224 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SCG8|A9SCG8_PHYPA Predicted protein OS=Physcomitrella paten...   100   3e-20
tr|A7QDY4|A7QDY4_VITVI Chromosome chr4 scaffold_83, whole genome...    94   4e-18
tr|A5B1U1|A5B1U1_VITVI Putative uncharacterized protein OS=Vitis...    94   4e-18
tr|A3BMS7|A3BMS7_ORYSJ Putative uncharacterized protein OS=Oryza...    85   7e-16
tr|B8B548|B8B548_ORYSI Putative uncharacterized protein OS=Oryza...    82   6e-15
tr|O65645|O65645_ARATH ATM-like protein OS=Arabidopsis thaliana ...    82   2e-14
tr|Q9SL52|Q9SL52_ARATH Putative uncharacterized protein At2g1793...    81   3e-14
tr|A4S164|A4S164_OSTLU Predicted protein OS=Ostreococcus lucimar...    57   1e-08
tr|Q013R7|Q013R7_OSTTA FAT domain-containing protein / phosphati...    58   3e-07
tr|Q1DT98|Q1DT98_COCIM Putative uncharacterized protein OS=Cocci...    52   1e-05
tr|B8MAR8|B8MAR8_9EURO Histone acetylase complex subunit Paf400,...    52   1e-05
tr|B6QF50|B6QF50_PENMA Histone acetylase complex subunit Paf400,...    52   1e-05
tr|A8QD26|A8QD26_MALGO Putative uncharacterized protein OS=Malas...    50   4e-05
tr|Q4WED0|Q4WED0_ASPFU Histone acetylase complex subunit Paf400,...    50   6e-05
tr|Q2UAI4|Q2UAI4_ASPOR Histone acetyltransferase SAGA OS=Aspergi...    50   6e-05
tr|Q0CAR0|Q0CAR0_ASPTN Putative uncharacterized protein OS=Asper...    50   6e-05
tr|B8NQ86|B8NQ86_ASPFL Histone acetylase complex subunit Paf400,...    50   6e-05
tr|B6HJI0|B6HJI0_PENCH Pc21g15390 protein OS=Penicillium chrysog...    50   6e-05
tr|B0Y2D8|B0Y2D8_ASPFC Histone acetylase complex subunit Paf400,...    50   6e-05
tr|A6QSR9|A6QSR9_AJECN Putative uncharacterized protein OS=Ajell...    50   6e-05
tr|A5AAC6|A5AAC6_ASPNC Remark: TRRAP is an essential cofactor fo...    50   6e-05
tr|A1D055|A1D055_NEOFI Histone acetylase complex subunit Paf400,...    50   6e-05
tr|Q5AUN0|Q5AUN0_EMENI Putative uncharacterized protein OS=Emeri...    49   1e-04
tr|A1C580|A1C580_ASPCL Histone acetylase complex subunit Paf400,...    49   1e-04
tr|Q9HEI9|Q9HEI9_NEUCR Related to the component Tra1 of the SAGA...    49   1e-04
tr|Q7S7K6|Q7S7K6_NEUCR Putative uncharacterized protein OS=Neuro...    49   1e-04
tr|Q2HBF6|Q2HBF6_CHAGB Putative uncharacterized protein OS=Chaet...    49   1e-04
tr|A4QUG9|A4QUG9_MAGGR Putative uncharacterized protein OS=Magna...    49   2e-04
tr|Q0UBC8|Q0UBC8_PHANO Putative uncharacterized protein OS=Phaeo...    48   2e-04
tr|B2WLN6|B2WLN6_PYRTR Transcription-associated protein 1 OS=Pyr...    48   2e-04

>tr|A9SCG8|A9SCG8_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_183414 PE=4 SV=1
          Length = 3825

 Score =  100 bits (250), Expect = 3e-20
 Identities = 48/60 (80%), Positives = 54/60 (90%)
 Frame = -1

Query: 224 LMETCIKCATEVDKPQGYMLLLRTMFQSLSSGKFELLFREFIPYLQPCLNMLLGMLEGPT 45
           LME+C+K ATEV+KP GYM LLRTMF++LS GKFELLFREFIP LQPCLNMLL M+EGPT
Sbjct: 617 LMESCMKNATEVEKPLGYMQLLRTMFRALSGGKFELLFREFIPTLQPCLNMLLAMVEGPT 676


>tr|A7QDY4|A7QDY4_VITVI Chromosome chr4 scaffold_83, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00036786001
           PE=4 SV=1
          Length = 3813

 Score = 93.6 bits (231), Expect = 4e-18
 Identities = 43/60 (71%), Positives = 52/60 (86%)
 Frame = -1

Query: 224 LMETCIKCATEVDKPQGYMLLLRTMFQSLSSGKFELLFREFIPYLQPCLNMLLGMLEGPT 45
           +ME C+K ATEV++P GY+ LLRTMF++L+ GKFELL R+ IP LQPCLNMLLGMLEGPT
Sbjct: 749 IMEVCMKNATEVERPLGYIQLLRTMFRALAGGKFELLLRDLIPTLQPCLNMLLGMLEGPT 808


>tr|A5B1U1|A5B1U1_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_021747 PE=4 SV=1
          Length = 2411

 Score = 93.6 bits (231), Expect = 4e-18
 Identities = 43/60 (71%), Positives = 52/60 (86%)
 Frame = -1

Query: 224 LMETCIKCATEVDKPQGYMLLLRTMFQSLSSGKFELLFREFIPYLQPCLNMLLGMLEGPT 45
           +ME C+K ATEV++P GY+ LLRTMF++L+ GKFELL R+ IP LQPCLNMLLGMLEGPT
Sbjct: 276 IMEVCMKNATEVERPLGYIQLLRTMFRALAGGKFELLLRDLIPTLQPCLNMLLGMLEGPT 335


>tr|A3BMS7|A3BMS7_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_024349 PE=4 SV=1
          Length = 3671

 Score = 85.1 bits (209), Expect(2) = 7e-16
 Identities = 39/60 (65%), Positives = 49/60 (81%)
 Frame = -1

Query: 224 LMETCIKCATEVDKPQGYMLLLRTMFQSLSSGKFELLFREFIPYLQPCLNMLLGMLEGPT 45
           +ME C+K ATEV+KP GYM LLR+MF++L+  KF+ L R+ IP LQPCLNMLL ML+GPT
Sbjct: 596 IMEVCMKSATEVEKPLGYMHLLRSMFRALNIAKFDSLMRDLIPSLQPCLNMLLSMLDGPT 655



 Score = 21.6 bits (44), Expect(2) = 7e-16
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -2

Query: 37  EMIDLVVELCLI 2
           +M DL++ELCLI
Sbjct: 658 DMRDLILELCLI 669


>tr|B8B548|B8B548_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_27084 PE=4 SV=1
          Length = 3795

 Score = 82.0 bits (201), Expect(2) = 6e-15
 Identities = 38/60 (63%), Positives = 48/60 (80%)
 Frame = -1

Query: 224 LMETCIKCATEVDKPQGYMLLLRTMFQSLSSGKFELLFREFIPYLQPCLNMLLGMLEGPT 45
           +ME C+K ATEV+KP GYM LLR+MF++L+  KF+ L R+ IP LQPCL MLL ML+GPT
Sbjct: 596 IMEVCMKSATEVEKPLGYMHLLRSMFRALNIAKFDSLMRDLIPSLQPCLYMLLSMLDGPT 655



 Score = 21.6 bits (44), Expect(2) = 6e-15
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -2

Query: 37  EMIDLVVELCLI 2
           +M DL++ELCLI
Sbjct: 658 DMRDLILELCLI 669


>tr|O65645|O65645_ARATH ATM-like protein OS=Arabidopsis thaliana
           GN=T19K4.210 PE=4 SV=1
          Length = 3738

 Score = 81.6 bits (200), Expect = 2e-14
 Identities = 38/59 (64%), Positives = 47/59 (79%)
 Frame = -1

Query: 224 LMETCIKCATEVDKPQGYMLLLRTMFQSLSSGKFELLFREFIPYLQPCLNMLLGMLEGP 48
           +ME C+K ATEV+KP GYM LLRT+F+ L+  KFELL R+ +P L PCLN+LL MLEGP
Sbjct: 673 IMEVCMKNATEVEKPLGYMQLLRTVFRGLAGCKFELLLRDLVPMLLPCLNILLTMLEGP 731


>tr|Q9SL52|Q9SL52_ARATH Putative uncharacterized protein At2g17930
           (Fragment) OS=Arabidopsis thaliana GN=At2g17930 PE=2
           SV=2
          Length = 2938

 Score = 80.9 bits (198), Expect = 3e-14
 Identities = 38/59 (64%), Positives = 47/59 (79%)
 Frame = -1

Query: 224 LMETCIKCATEVDKPQGYMLLLRTMFQSLSSGKFELLFREFIPYLQPCLNMLLGMLEGP 48
           +ME C+K ATEV+KP GYM LLRT+F+ L+  K+ELL R+ IP L PCLN+LL MLEGP
Sbjct: 604 IMEVCMKNATEVEKPLGYMQLLRTVFRGLAGCKYELLLRDLIPMLLPCLNILLTMLEGP 662


>tr|A4S164|A4S164_OSTLU Predicted protein OS=Ostreococcus
           lucimarinus (strain CCE9901) GN=OSTLU_42472 PE=4 SV=1
          Length = 3790

 Score = 56.6 bits (135), Expect(2) = 1e-08
 Identities = 24/59 (40%), Positives = 40/59 (67%)
 Frame = -1

Query: 224 LMETCIKCATEVDKPQGYMLLLRTMFQSLSSGKFELLFREFIPYLQPCLNMLLGMLEGP 48
           +ME+C++   E + P  Y+ LLR +F++++  KF++L+RE +P L   L+ LL ML GP
Sbjct: 627 MMESCLQAIREHENPTAYIRLLRYLFRAMAQAKFDVLYREVVPILPASLDCLLEMLNGP 685



 Score = 25.8 bits (55), Expect(2) = 1e-08
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -2

Query: 73  CFLECWRGLHGVEMIDLVVELCLI 2
           C LE   G    E+ D VVELCLI
Sbjct: 677 CLLEMLNGPDPHELHDTVVELCLI 700


>tr|Q013R7|Q013R7_OSTTA FAT domain-containing protein /
           phosphatidylinositol 3-and 4-kinase family protein (ISS)
           (Fragment) OS=Ostreococcus tauri GN=Ot08g01230 PE=4 SV=1
          Length = 3489

 Score = 57.8 bits (138), Expect = 3e-07
 Identities = 24/59 (40%), Positives = 39/59 (66%)
 Frame = -1

Query: 224 LMETCIKCATEVDKPQGYMLLLRTMFQSLSSGKFELLFREFIPYLQPCLNMLLGMLEGP 48
           +M+ C+K   E D P  Y+ LLR +F++++  KF++L++E +P L   L+ LL ML GP
Sbjct: 668 MMDACLKAIRENDNPSAYVRLLRYLFRAMAQAKFDVLYQEVVPILPATLDCLLAMLNGP 726


>tr|Q1DT98|Q1DT98_COCIM Putative uncharacterized protein
           OS=Coccidioides immitis GN=CIMG_06465 PE=4 SV=1
          Length = 3335

 Score = 52.0 bits (123), Expect = 1e-05
 Identities = 23/58 (39%), Positives = 39/58 (67%), Gaps = 4/58 (6%)
 Frame = -1

Query: 224 LMETCIKCATEVDKPQGYMLLLRTMFQSLSSGKFELLFREFIPYLQPCL----NMLLG 63
           ++  CI+ +   ++P  Y LLLR++F+S+  G+FELL++E +P L+  L    N+LLG
Sbjct: 269 IVTKCIELSVTAEEPMNYFLLLRSLFRSIGGGRFELLYKELLPLLEMLLETFNNLLLG 326