BP920224 |
Clone id |
YMU001_000134_E03 |
Library |
YMU01 |
Length |
508 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000134_E03. |
Accession |
BP920224 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
ACTTAACATATTTAACCCACCCTCCCAACCGTGTAAATCTAGATCTTCATCTAGCAGATC CTGCACCTGCCCGACAACACACTGCACAGCTGCTTTGATCACCATTCCTTTCAACCACCA CTCATAGGACTCCTTAGAAAGCTTGGACACTGCCTTGGAATCCACATCACATGTCATAGA GGGCCTTGGCTGCATAGGAAGCACCTCTATCTTTGACTCTGCATTGCTCTTGTCACCTGT AATGCAGTCAATTTCAGCATCGTTGAGCTCCTCTTCATCAATTGGCCCTTCAAGATCGAT AAGCACCATCTGCTTGTCGACTGCAACTACCTGCTCTTTTACCATTGCATCAAGATCCAC CAAAGAAGAGAGAAACTCATTCTCTATTGCATCATCCTTGTCTCCCTCCGTAGGCACGGC TGTTCTATCTCTCTTGGCAAAACTTTGCACCTGTTGCACCATTATGGCACATTCCATCGC TACCTTCATCAACACGGCCATTAGCATG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O95674 |
Definition |
sp|O95674|CDS2_HUMAN Phosphatidate cytidylyltransferase 2 OS=Homo sapiens |
Align length |
67 |
Score (bit) |
39.3 |
E-value |
0.011 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B3KNK4 |
Definition |
tr|B3KNK4|B3KNK4_HUMAN cDNA FLJ14789 fis, clone NT2RP4000928, highly similar to Phosphatidate cytidylyltransferase 2 (EC 2.7.7.41) OS=Homo sapiens |
Align length |
67 |
Score (bit) |
39.3 |
E-value |
0.11 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP920224|Adiantum capillus-veneris mRNA, clone: YMU001_000134_E03. (508 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B3KNK4|B3KNK4_HUMAN cDNA FLJ14789 fis, clone NT2RP4000928, hi... 39 0.11 tr|B3KM95|B3KM95_HUMAN cDNA FLJ10552 fis, clone NT2RP2002312, hi... 39 0.11 tr|B2RDC6|B2RDC6_HUMAN cDNA, FLJ96552, Homo sapiens CDP-diacylgl... 39 0.11 tr|A0Z8N4|A0Z8N4_9GAMM ATPase with chaperone activity, ATP-bindi... 38 0.32 tr|A5DH10|A5DH10_PICGU Putative uncharacterized protein OS=Pichi... 36 0.94 tr|Q08YE3|Q08YE3_STIAU NAD-dependent epimerase/dehydratase OS=St... 35 2.7 tr|A0YQF7|A0YQF7_9CYAN Transposase OS=Lyngbya sp. PCC 8106 GN=L8... 35 2.7 tr|B4IXX0|B4IXX0_DROGR GH16272 OS=Drosophila grimshawi GN=GH1627... 35 2.7 tr|Q2H482|Q2H482_CHAGB Putative uncharacterized protein OS=Chaet... 34 3.6 tr|Q67QJ9|Q67QJ9_SYMTH Putative uncharacterized protein OS=Symbi... 34 4.7 tr|A6FQT0|A6FQT0_9RHOB Putative uncharacterized protein OS=Roseo... 33 6.1 tr|B4GG10|B4GG10_DROPE GL21523 OS=Drosophila persimilis GN=GL215... 33 6.1 tr|A2EJK4|A2EJK4_TRIVA Putative uncharacterized protein OS=Trich... 33 6.1 tr|Q7QG88|Q7QG88_ANOGA AGAP009554-PA OS=Anopheles gambiae GN=AGA... 33 8.0 tr|A2E5Y7|A2E5Y7_TRIVA Putative uncharacterized protein OS=Trich... 33 8.0 tr|Q2KFL9|Q2KFL9_MAGGR Putative uncharacterized protein OS=Magna... 33 8.0 tr|A4RBG5|A4RBG5_MAGGR Putative uncharacterized protein OS=Magna... 33 8.0
>tr|B3KNK4|B3KNK4_HUMAN cDNA FLJ14789 fis, clone NT2RP4000928, highly similar to Phosphatidate cytidylyltransferase 2 (EC 2.7.7.41) OS=Homo sapiens PE=2 SV=1 Length = 445
Score = 39.3 bits (90), Expect = 0.11 Identities = 21/67 (31%), Positives = 39/67 (58%) Frame = -2
Query: 285 PIDEEELNDAEIDCITGDKSNAESKIEVLPMQPRPSMTCDVDSKAVSKLSKESYEWWLKG 106 P D+E ++A++D T S++ES+ E P+ T +V ++A+S LS WW++G Sbjct: 16 PEDKESESEAKVDGETA--SDSESRAESAPLPVSADDTPEVLNRALSNLSSRWKNWWVRG 73
Query: 105 MVIKAAV 85 ++ A + Sbjct: 74 ILTLAMI 80
>tr|B3KM95|B3KM95_HUMAN cDNA FLJ10552 fis, clone NT2RP2002312, highly similar to Phosphatidate cytidylyltransferase 2 (EC 2.7.7.41) OS=Homo sapiens PE=2 SV=1 Length = 445
Score = 39.3 bits (90), Expect = 0.11 Identities = 21/67 (31%), Positives = 39/67 (58%) Frame = -2
Query: 285 PIDEEELNDAEIDCITGDKSNAESKIEVLPMQPRPSMTCDVDSKAVSKLSKESYEWWLKG 106 P D+E ++A++D T S++ES+ E P+ T +V ++A+S LS WW++G Sbjct: 16 PEDKESESEAKVDGETA--SDSESRAESAPLPVSADDTPEVLNRALSNLSSRWKNWWVRG 73
Query: 105 MVIKAAV 85 ++ A + Sbjct: 74 ILTLAMI 80
>tr|B2RDC6|B2RDC6_HUMAN cDNA, FLJ96552, Homo sapiens CDP-diacylglycerol synthase (phosphatidatecytidylyltransferase) 2 (CDS2), mRNA (CDP-diacylglycerol synthase (Phosphatidate cytidylyltransferase) 2, isoform CRA_a) OS=Homo sapiens GN=CDS2 PE=2 SV=1 Length = 445
Score = 39.3 bits (90), Expect = 0.11 Identities = 21/67 (31%), Positives = 39/67 (58%) Frame = -2
Query: 285 PIDEEELNDAEIDCITGDKSNAESKIEVLPMQPRPSMTCDVDSKAVSKLSKESYEWWLKG 106 P D+E ++A++D T S++ES+ E P+ T +V ++A+S LS WW++G Sbjct: 16 PEDKESESEAKVDGETA--SDSESRAESAPLPVSADDTPEVLNRALSNLSSRWKNWWVRG 73
Query: 105 MVIKAAV 85 ++ A + Sbjct: 74 ILTLAMI 80
>tr|A0Z8N4|A0Z8N4_9GAMM ATPase with chaperone activity, ATP-binding subunit OS=marine gamma proteobacterium HTCC2080 GN=MGP2080_07529 PE=3 SV=1 Length = 859
Score = 37.7 bits (86), Expect = 0.32 Identities = 21/114 (18%), Positives = 59/114 (51%), Gaps = 2/114 (1%) Frame = -2
Query: 459 VQQVQSFAKRDRTAVPTEGDKDDAIENEFLSSLVDLDAMVKEQVVAVDKQMVLIDLEGPI 280 + + A R R + ++ + D +E + ++ +A+ K+Q A KQ+ L+D++ Sbjct: 391 IDLIDEAASRIRMEIDSKPESMDRLERRLIQLKIEREAVNKDQTEAAQKQVALLDVQVAE 450
Query: 279 DEEELNDAEIDCITGDKSNAESKIEVLPMQPRPSMTCDVDSKA--VSKLSKESY 124 ++EL+D + + +T +K+ + ++ + + ++ +A ++++S+ Y Sbjct: 451 LDQELSDLD-EILTAEKAAVQGAAKIKAAIEQAKLDLEMAQRAGDLTRMSEIQY 503
>tr|A5DH10|A5DH10_PICGU Putative uncharacterized protein OS=Pichia guilliermondii GN=PGUG_02561 PE=4 SV=2 Length = 821
Score = 36.2 bits (82), Expect = 0.94 Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 9/114 (7%) Frame = -2
Query: 450 VQSFAKRDRTAVPTEGDKDDAIENEF--------LSSLVDLDAMVKEQVVAVDKQMVLID 295 + SF R +++V +E D D EN + LS+ L + V + D Sbjct: 1 MSSFWPRRQSSVSSEEDMFDTAENYYGRKTNPSHLSAKSKLGRVRTFSVFEPKTKSRFFD 60
Query: 294 LEGPIDEEELNDAEIDCITGDKSNAESKIEVLPMQPRPSM-TCDVDSKAVSKLS 136 +GP+D E + D + D ++ + +P Q RPS+ CDV +++ LS Sbjct: 61 DDGPLDPVEGSAPVSDESSPDPRDSTDTVNEVPQQKRPSIYPCDVQAESTGSLS 114
>tr|Q08YE3|Q08YE3_STIAU NAD-dependent epimerase/dehydratase OS=Stigmatella aurantiaca DW4/3-1 GN=STIAU_1198 PE=4 SV=1 Length = 310
Score = 34.7 bits (78), Expect = 2.7 Identities = 16/39 (41%), Positives = 21/39 (53%) Frame = +1
Query: 79 TLHSCFDHHSFQPPLIGLLRKLGHCLGIHITCHRGPWLH 195 T+HS DHH F P LI + RK G + +R P +H Sbjct: 162 TVHSSLDHHGFVPSLITMARKNGFAAYVGDGANRWPTVH 200
>tr|A0YQF7|A0YQF7_9CYAN Transposase OS=Lyngbya sp. PCC 8106 GN=L8106_29845 PE=4 SV=1 Length = 390
Score = 34.7 bits (78), Expect = 2.7 Identities = 15/68 (22%), Positives = 33/68 (48%), Gaps = 6/68 (8%) Frame = +1
Query: 232 VTCNAVNFSIVELLFINWPFKIDKH------HLLVDCNYLLFYHCIKIHQRREKLILYCI 393 + CN++ F ++ FK+ +H H ++ +++ HCI +H+R ++ C+ Sbjct: 3 IDCNSLQFMVLYQTMKTLKFKLYRHKRNKSLHQTINAAGMIYNHCIALHKRYYRMFGKCV 62
Query: 394 ILVSLRRH 417 L+ H Sbjct: 63 KKAKLQSH 70
>tr|B4IXX0|B4IXX0_DROGR GH16272 OS=Drosophila grimshawi GN=GH16272 PE=4 SV=1 Length = 1984
Score = 34.7 bits (78), Expect = 2.7 Identities = 23/93 (24%), Positives = 49/93 (52%), Gaps = 2/93 (2%) Frame = -2
Query: 402 DKDDAIENEFLSSLVDLDAMVKEQVVAVDKQMVLIDLEGPIDEEELNDAEIDCITGDKSN 223 +K ++IE+E + V++ +E+ +++ L PI E+E ND++ D G+ ++ Sbjct: 866 EKSESIESEVVVIQVEVQEGKEEENEEEEEEQPLPPPPPPITEDEFNDSQNDNDNGNAND 925
Query: 222 AESKIEVLPMQPRPSMTCDVD--SKAVSKLSKE 130 +S P QPR + ++ SK + + ++E Sbjct: 926 NQSVSLSHPEQPREAPVIEIANFSKLIERRAQE 958
>tr|Q2H482|Q2H482_CHAGB Putative uncharacterized protein OS=Chaetomium globosum GN=CHGG_06533 PE=4 SV=1 Length = 780
Score = 34.3 bits (77), Expect = 3.6 Identities = 18/51 (35%), Positives = 33/51 (64%) Frame = -2
Query: 285 PIDEEELNDAEIDCITGDKSNAESKIEVLPMQPRPSMTCDVDSKAVSKLSK 133 PI++EEL DAE+D I G+K ++ES + ++ + + +S+ +S L+K Sbjct: 178 PIEDEEL-DAELDVIKGEKKDSESANDAYMVKLWKQVPRNAESQTISHLAK 227
>tr|Q67QJ9|Q67QJ9_SYMTH Putative uncharacterized protein OS=Symbiobacterium thermophilum GN=STH1059 PE=4 SV=1 Length = 196
Score = 33.9 bits (76), Expect = 4.7 Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 11/124 (8%) Frame = -2
Query: 402 DKDDAIENEFLSSLVDLDAMVKEQVVAVDKQM-----------VLIDLEGPIDEEELNDA 256 D+ A+ E S+ +L A V+ Q ++ +M VL++ EG + E Sbjct: 72 DEVAALRAELASTTAELQAEVRRQREELEAEMKRVQEAAVAAGVLLEQEGELTGLEARLK 131
Query: 255 EIDCITGDKSNAESKIEVLPMQPRPSMTCDVDSKAVSKLSKESYEWWLKGMVIKAAVQCV 76 EI+ + D +A +++ S+ + S + S E +KG++IKA + + Sbjct: 132 EIETLKLDLKSAREEMDAKLQALEASLKDQLASSEQETAAALSLEMSVKGLLIKAQGEVL 191
Query: 75 VGQV 64 + QV Sbjct: 192 LAQV 195
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