BP920245
Clone id YMU001_000134_G03
Library
Length 516
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000134_G03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GGCTTAAAGCTCCTTGCCTTTACCGCTAGGCCAACTTTCCTTGCGATTTTGGATACACTC
TTACATGATTTGAGGTAAGCACTTCCTTTAAAGCAGTTTGAAGCACGTGCAAGATGTTAG
TGAAGCTACATTAGGTTTGTTGCCTGTAGTTTTGGAACCATACTTGTATGGTAACCTGAA
CCATACCTGTATGAGAACTGATATCATACTGGGCCAAAATTGGCAAGAAAAGTTCAAGCT
AATGAAGTTAATACGGGCATTAATGATGTCTGAACTTAGAAGTAGTTCAAGACTAAAGAA
AGATGTGAAAAGTTCCAGATCTCTATGCTTATCATATCAGGGTTGCGTATCTTTCATGTT
CCAAGGTTAAAACATACTCAGATCATACGTCCATACGCGTATGCAGTTGCCGTATGGAGA
TGTATGGAAAATTTCATGCTTGTTGCTGATCTGGCTTGATGCCAAGCAAGCAGCTCTAAG
TTATAACAAGCCTTCTTAGTGGAGTGAAACTGGAGT
■■Homology search results ■■ -
sp_hit_id Q9ZV65
Definition sp|Q9ZV65|HDG3_ARATH Homeobox-leucine zipper protein HDG3 OS=Arabidopsis thaliana
Align length 25
Score (bit) 30.0
E-value 6.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920245|Adiantum capillus-veneris mRNA, clone:
YMU001_000134_G03.
(516 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9ZV65|HDG3_ARATH Homeobox-leucine zipper protein HDG3 OS=Ara... 30 6.7

>sp|Q9ZV65|HDG3_ARATH Homeobox-leucine zipper protein HDG3
OS=Arabidopsis thaliana GN=HDG3 PE=2 SV=2
Length = 725

Score = 30.0 bits (66), Expect = 6.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3

Query: 211 QYDISSHTGMVQVTIQVWFQNYRQQ 137
+YD+S+ G+ V I+ WFQN R Q
Sbjct: 98 RYDLSAQLGLDPVQIKFWFQNKRTQ 122


tr_hit_id B7S4E2
Definition tr|B7S4E2|B7S4E2_PHATR Predicted protein OS=Phaeodactylum tricornutum CCAP 1055/1
Align length 48
Score (bit) 34.3
E-value 3.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP920245|Adiantum capillus-veneris mRNA, clone:
YMU001_000134_G03.
(516 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B7S4E2|B7S4E2_PHATR Predicted protein OS=Phaeodactylum tricor... 34 3.8

>tr|B7S4E2|B7S4E2_PHATR Predicted protein OS=Phaeodactylum
tricornutum CCAP 1055/1 GN=PHATRDRAFT_bd1467 PE=4 SV=1
Length = 505

Score = 34.3 bits (77), Expect = 3.8
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 7/48 (14%)
Frame = -1

Query: 243 ISLNFSCQFWPSMISVLI-------QVWFRLPYKYGSKTTGNKPNVAS 121
I L+FSC+FWP ++ +I ++WFR +Y S TT + VA+
Sbjct: 321 IRLSFSCRFWPELVQSIICANQAIPEIWFR---EYRSVTTESMVYVAT 365