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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP920258
Clone id YMU001_000134_H06
Library
Length 468
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000134_H06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CAAATAATCAACACTTCGTAAGATGAGCTGAACATGGCACAATACCAAAAGGGCTTGCAT
ACTGGTTCCTCTTTCTCGGCGAGAATGACCCAAAACATTTCCTTAATATAAGGGCCTAGG
CTACCAAACAAACTTTTTAGGTCCCAGACCCCACTGTCAAGAGGCTTCCTGTTTCTGCGG
ACTGAACAAAATCGACCGACCGACTGGTGGGGAATTCTCATTTGCCCCACTATCATCCTC
AAAATATTACAAATCACTTTTTATCCAAATGCCCAAACATCTTTTTCCATGCTGCAGAGG
CCTCTTTGTTACTATAGAACTGCCAAATATGTTCATTCATCTTTTCGCTCTCCCGTGATT
GCAGGATTTCCTGCAACTTTGCCTCTGGTAATGTCTTCAAATGAAAACAATCAAAAAGCT
CCCCCCATTTGCTTCGACAGTTATCAAAAGTTCCCTCTCTGTAATACT
■■Homology search results ■■ -
sp_hit_id Q8PMI8
Definition sp|Q8PMI8|TPMT_XANAC Thiopurine S-methyltransferase OS=Xanthomonas axonopodis pv. citri
Align length 28
Score (bit) 30.8
E-value 3.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920258|Adiantum capillus-veneris mRNA, clone:
YMU001_000134_H06.
         (468 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8PMI8|TPMT_XANAC Thiopurine S-methyltransferase OS=Xanthomon...    31   3.1  
sp|Q09195|ERG24_SCHPO Delta(14)-sterol reductase OS=Schizosaccha...    30   6.8  

>sp|Q8PMI8|TPMT_XANAC Thiopurine S-methyltransferase OS=Xanthomonas
           axonopodis pv. citri GN=tpm PE=3 SV=1
          Length = 218

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = +2

Query: 242 KYYKSLFIQMPKHLFPCCRGLFVTIELP 325
           +Y +++++Q+P H    CRGL +T+E P
Sbjct: 136 RYLQTVYVQLPTH----CRGLLITLEYP 159


>sp|Q09195|ERG24_SCHPO Delta(14)-sterol reductase
           OS=Schizosaccharomyces pombe GN=erg24 PE=2 SV=1
          Length = 424

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 16/55 (29%), Positives = 24/55 (43%)
 Frame = -2

Query: 194 RFCSVRRNRKPLDSGVWDLKSLFGSLGPYIKEMFWVILAEKEEPVCKPFWYCAMF 30
           +F   +R  K L SG W +       G +I    W + A    P+  P++Y A F
Sbjct: 333 KFIQTKRGTKLLTSGWWGMARHINYFGDWIMAWAWCLPAGFGSPI--PYFYVAYF 385
tr_hit_id A7PYU8
Definition tr|A7PYU8|A7PYU8_VITVI Chromosome chr12 scaffold_38, whole genome shotgun sequence OS=Vitis vinifera
Align length 68
Score (bit) 81.3
E-value 2.0e-14
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP920258|Adiantum capillus-veneris mRNA, clone:
YMU001_000134_H06.
         (468 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7PYU8|A7PYU8_VITVI Chromosome chr12 scaffold_38, whole genom...    81   2e-14
tr|A5B119|A5B119_VITVI Putative uncharacterized protein OS=Vitis...    81   3e-14
tr|Q69MT8|Q69MT8_ORYSJ Os09g0516800 protein OS=Oryza sativa subs...    75   2e-12
tr|A3C0N3|A3C0N3_ORYSJ Putative uncharacterized protein OS=Oryza...    75   2e-12
tr|A2Z349|A2Z349_ORYSI Putative uncharacterized protein OS=Oryza...    75   2e-12
tr|Q3E719|Q3E719_ARATH Uncharacterized protein At4g25315.1 (At4g...    65   1e-09
tr|B4FZ15|B4FZ15_MAIZE Putative uncharacterized protein OS=Zea m...    65   1e-09
tr|B4FM77|B4FM77_MAIZE Putative uncharacterized protein OS=Zea m...    65   1e-09
tr|A4RTC9|A4RTC9_OSTLU Cys-containing conserved protein OS=Ostre...    38   0.29 
tr|Q5JJW0|Q5JJW0_ORYSJ DNA-directed RNA polymerase OS=Oryza sati...    35   1.9  
tr|Q8VY23|Q8VY23_ARATH Putative uncharacterized protein At4g3260...    34   4.2  
tr|O65539|O65539_ARATH Putative uncharacterized protein F4D11.20...    34   4.2  
tr|Q873L9|Q873L9_NEUCR Putative uncharacterized protein B18E6.06...    34   4.2  
tr|B6SYJ2|B6SYJ2_MAIZE Putative uncharacterized protein OS=Zea m...    33   9.3  
tr|B4FUI1|B4FUI1_MAIZE Putative uncharacterized protein OS=Zea m...    33   9.3  
tr|B5X8F0|B5X8F0_SALSA Heat shock protein 30 OS=Salmo salar GN=H...    33   9.4  

>tr|A7PYU8|A7PYU8_VITVI Chromosome chr12 scaffold_38, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00026585001
           PE=4 SV=1
          Length = 107

 Score = 81.3 bits (199), Expect = 2e-14
 Identities = 35/68 (51%), Positives = 48/68 (70%)
 Frame = -3

Query: 466 YYREGTFDNCRSKWGELFDCFHLKTLPEAKLQEILQSRESEKMNEHIWQFYSNKEASAAW 287
           YYR G  DNC  KW  L DC  LKT   +++QEIL++RE +K   HIW F +++E+S+ W
Sbjct: 39  YYRLGVLDNCADKWSSLLDCLSLKTKRSSEVQEILENREKDK--PHIWTFRTSEESSSHW 96

Query: 286 KKMFGHLD 263
           K++FGHLD
Sbjct: 97  KEVFGHLD 104


>tr|A5B119|A5B119_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_013907 PE=4 SV=1
          Length = 107

 Score = 80.9 bits (198), Expect = 3e-14
 Identities = 35/68 (51%), Positives = 48/68 (70%)
 Frame = -3

Query: 466 YYREGTFDNCRSKWGELFDCFHLKTLPEAKLQEILQSRESEKMNEHIWQFYSNKEASAAW 287
           YYR G  DNC  KW  L DC  LKT   +++QEIL++RE +K   HIW F +++E+S+ W
Sbjct: 39  YYRLGVLDNCAXKWSSLLDCLSLKTKRSSEVQEILENREKDK--PHIWTFRTSEESSSHW 96

Query: 286 KKMFGHLD 263
           K++FGHLD
Sbjct: 97  KEVFGHLD 104


>tr|Q69MT8|Q69MT8_ORYSJ Os09g0516800 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBb0034B12.19 PE=4 SV=1
          Length = 169

 Score = 74.7 bits (182), Expect = 2e-12
 Identities = 35/67 (52%), Positives = 43/67 (64%)
 Frame = -3

Query: 466 YYREGTFDNCRSKWGELFDCFHLKTLPEAKLQEILQSRESEKMNEHIWQFYSNKEASAAW 287
           YYR G FDNC  KWG+L DC  LKT   A+ +EIL +R  EK   HIW + +  EAS  W
Sbjct: 43  YYRHGEFDNCFGKWGDLVDCLWLKTRRAAEAEEILAAR--EKARPHIWTYRTVDEASDNW 100

Query: 286 KKMFGHL 266
            +M+GHL
Sbjct: 101 LRMYGHL 107


>tr|A3C0N3|A3C0N3_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_028855 PE=4 SV=1
          Length = 169

 Score = 74.7 bits (182), Expect = 2e-12
 Identities = 35/67 (52%), Positives = 43/67 (64%)
 Frame = -3

Query: 466 YYREGTFDNCRSKWGELFDCFHLKTLPEAKLQEILQSRESEKMNEHIWQFYSNKEASAAW 287
           YYR G FDNC  KWG+L DC  LKT   A+ +EIL +R  EK   HIW + +  EAS  W
Sbjct: 43  YYRHGEFDNCFGKWGDLVDCLWLKTRRAAEAEEILAAR--EKARPHIWTYRTVDEASDNW 100

Query: 286 KKMFGHL 266
            +M+GHL
Sbjct: 101 LRMYGHL 107


>tr|A2Z349|A2Z349_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_32048 PE=4 SV=1
          Length = 169

 Score = 74.7 bits (182), Expect = 2e-12
 Identities = 35/67 (52%), Positives = 43/67 (64%)
 Frame = -3

Query: 466 YYREGTFDNCRSKWGELFDCFHLKTLPEAKLQEILQSRESEKMNEHIWQFYSNKEASAAW 287
           YYR G FDNC  KWG+L DC  LKT   A+ +EIL +R  EK   HIW + +  EAS  W
Sbjct: 43  YYRHGEFDNCFGKWGDLVDCLWLKTRRAAEAEEILAAR--EKARPHIWTYRTVDEASDNW 100

Query: 286 KKMFGHL 266
            +M+GHL
Sbjct: 101 LRMYGHL 107


>tr|Q3E719|Q3E719_ARATH Uncharacterized protein At4g25315.1
           (At4g25315) OS=Arabidopsis thaliana GN=At4g25315 PE=2
           SV=1
          Length = 127

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 27/68 (39%), Positives = 41/68 (60%)
 Frame = -3

Query: 466 YYREGTFDNCRSKWGELFDCFHLKTLPEAKLQEILQSRESEKMNEHIWQFYSNKEASAAW 287
           YYR G  D+C  K+ +LFDC  LKT   ++ + IL+ +E     +HIW   + +EA + W
Sbjct: 56  YYRVGKLDDCTKKFSDLFDCLSLKTKRASEAERILEEQEKAAAEKHIWIMRTQEEAVSHW 115

Query: 286 KKMFGHLD 263
            + FGHL+
Sbjct: 116 NETFGHLE 123


>tr|B4FZ15|B4FZ15_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 139

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 31/66 (46%), Positives = 41/66 (62%)
 Frame = -3

Query: 466 YYREGTFDNCRSKWGELFDCFHLKTLPEAKLQEILQSRESEKMNEHIWQFYSNKEASAAW 287
           YYR G FD C  KWG+L  C  LKT  +A+++EIL +R  EK   HIW + +  EAS  W
Sbjct: 56  YYRYGEFDTCFGKWGDLMGCLALKTKRKAEVEEILIAR--EKAKPHIWTYRTVDEASENW 113

Query: 286 KKMFGH 269
            +M+ H
Sbjct: 114 WRMYKH 119


>tr|B4FM77|B4FM77_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 123

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 31/66 (46%), Positives = 41/66 (62%)
 Frame = -3

Query: 466 YYREGTFDNCRSKWGELFDCFHLKTLPEAKLQEILQSRESEKMNEHIWQFYSNKEASAAW 287
           YYR G FD C  KWG+L  C  LKT  +A+++EIL +R  EK   HIW + +  EAS  W
Sbjct: 40  YYRYGEFDTCFGKWGDLMGCLALKTKRKAEVEEILIAR--EKAKPHIWTYRTVDEASENW 97

Query: 286 KKMFGH 269
            +M+ H
Sbjct: 98  WRMYKH 103


>tr|A4RTC9|A4RTC9_OSTLU Cys-containing conserved protein
           OS=Ostreococcus lucimarinus (strain CCE9901) GN=CysR
           PE=4 SV=1
          Length = 138

 Score = 37.7 bits (86), Expect = 0.29
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
 Frame = -3

Query: 466 YYREGTFDNCRSKWGELFDCFHLK-------TLPEAKLQEI-LQSRESEKMNEHIWQFYS 311
           YYR G  D C  KW +L++CF +K         PE +      ++ E +           
Sbjct: 31  YYRHGELDACDEKWSDLWECFAVKRAQREGLPAPERRAARARAETGEGDANGTSPLTRED 90

Query: 310 NKEASAAWKKMFG 272
            + A  AW+K+FG
Sbjct: 91  AERAGRAWRKLFG 103


>tr|Q5JJW0|Q5JJW0_ORYSJ DNA-directed RNA polymerase OS=Oryza sativa
           subsp. japonica GN=P0458E05.13 PE=3 SV=1
          Length = 1568

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 20/54 (37%), Positives = 25/54 (46%)
 Frame = +2

Query: 293 CRGLFVTIELPNMFIHLFALP*LQDFLQLCLW*CLQMKTIKKLPPFASTVIKSS 454
           C G F  IELP    H   +  L   L L    CL++K  K+LPP     +K S
Sbjct: 80  CEGHFRFIELPMPIFHPSHVTELSQILNLICLRCLKIKNRKELPPLCVAEVKKS 133